RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 ADAT2Q7Z6V5 191 aaKnown RBP13.72□□□□□ -0.21
HDAC4-208ENST00000463007 SP8Q8IXZ3 490 aa13.72□□□□□ -0.21
HDAC4-208ENST00000463007 TEX11Q8IYF3 940 aa13.72□□□□□ -0.21
HDAC4-208ENST00000463007 CERS5Q8N5B7 392 aa13.72□□□□□ -0.21
HDAC4-208ENST00000463007 EYA3Q99504 573 aa13.72□□□□□ -0.21
HDAC4-208ENST00000463007 MYH4Q9Y623 1939 aa13.71□□□□□ -0.21
HDAC4-208ENST00000463007 ECM2O94769 699 aaPredicted RBP13.71□□□□□ -0.21
HDAC4-208ENST00000463007 CEP95Q96GE4 821 aa13.71□□□□□ -0.21
HDAC4-208ENST00000463007 SH2D4AQ9H788 454 aa13.71□□□□□ -0.21
HDAC4-208ENST00000463007 ADAMTS1Q9UHI8 967 aa13.71□□□□□ -0.21
HDAC4-208ENST00000463007 A0A1W2PQC6 194 aa13.71□□□□□ -0.21
HDAC4-208ENST00000463007 TARSL2A2RTX5 802 aaKnown RBP13.71□□□□□ -0.21
HDAC4-208ENST00000463007 PALMO75781 387 aa13.71□□□□□ -0.21
HDAC4-208ENST00000463007 POLR2FP61218 127 aaKnown RBP13.71□□□□□ -0.21
HDAC4-208ENST00000463007 CCDC40Q4G0X9 1142 aa13.71□□□□□ -0.21
HDAC4-208ENST00000463007 AMOTL1Q8IY63 956 aa13.71□□□□□ -0.21
HDAC4-208ENST00000463007 ZNF444Q8N0Y2 327 aaPredicted RBP13.71□□□□□ -0.21
HDAC4-208ENST00000463007 KIAA0895Q8NCT3 520 aa13.71□□□□□ -0.21
HDAC4-208ENST00000463007 AP1M1Q9BXS5 423 aa13.71□□□□□ -0.21
HDAC4-208ENST00000463007 PACSIN1Q9BY11 444 aa13.71□□□□□ -0.21
HDAC4-208ENST00000463007 CCSER1Q9C0I3 900 aa13.71□□□□□ -0.21
HDAC4-208ENST00000463007 RIOX1Q9H6W3 641 aa13.71□□□□□ -0.21
HDAC4-208ENST00000463007 SUGT1Q9Y2Z0 365 aa13.71□□□□□ -0.21
HDAC4-208ENST00000463007 HYOU1Q9Y4L1 999 aa13.71□□□□□ -0.21
HDAC4-208ENST00000463007 ARFGEF1Q9Y6D6 1849 aa13.71□□□□□ -0.22
HDAC4-208ENST00000463007 RGPD3A6NKT7 1758 aaPredicted RBP13.71□□□□□ -0.22
HDAC4-208ENST00000463007 RGPD4Q7Z3J3 1758 aa13.71□□□□□ -0.22
HDAC4-208ENST00000463007 KLRF2D3W0D1 207 aa13.71□□□□□ -0.22
HDAC4-208ENST00000463007 TRAF5O00463 557 aa13.71□□□□□ -0.22
HDAC4-208ENST00000463007 LAD1O00515 517 aa13.71□□□□□ -0.22
HDAC4-208ENST00000463007 GUCY2CP25092 1073 aa13.71□□□□□ -0.22
HDAC4-208ENST00000463007 POTEDQ86YR6 584 aa13.71□□□□□ -0.22
HDAC4-208ENST00000463007 RPGRIP1Q96KN7 1286 aa13.71□□□□□ -0.22
HDAC4-208ENST00000463007 KBTBD4Q9NVX7 518 aa13.71□□□□□ -0.22
HDAC4-208ENST00000463007 ATP6V0A2Q9Y487 856 aa13.71□□□□□ -0.22
HDAC4-208ENST00000463007 SCN9AQ15858 1988 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 ESYT2A0FGR8 921 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 RHOBTB3O94955 611 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 ACTN3Q08043 901 aaPredicted RBP13.7□□□□□ -0.22
HDAC4-208ENST00000463007 ZNF287Q9HBT7 754 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 CD248Q9HCU0 757 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 GRIN2DO15399 1336 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 BICDL2A1A5D9 508 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 SMCO2A6NFE2 343 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 SMIM23A6NLE4 172 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 TMCO5BA8MYB1 307 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 HSPA1LP34931 641 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 EPHB4P54760 987 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 MEA1Q16626 185 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 NAA35Q5VZE5 725 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 CEP57Q86XR8 500 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 CCDC170Q8IYT3 715 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 TBC1D5Q92609 795 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 NUP58Q9BVL2 599 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 TLR10Q9BXR5 811 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 TTYH3Q9C0H2 523 aa13.7□□□□□ -0.22
HDAC4-208ENST00000463007 MYO3BQ8WXR4 1341 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 TMOD1P28289 359 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 VWA3BQ502W6 1294 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 DDX4Q9NQI0 724 aaKnown RBP13.69□□□□□ -0.22
HDAC4-208ENST00000463007 FRMPD2Q68DX3 1309 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-208ENST00000463007 PPEF1O14829 653 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-208ENST00000463007 HDLBPQ00341 1268 aaKnown RBP13.69□□□□□ -0.22
HDAC4-208ENST00000463007 KIAA0753Q2KHM9 967 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 TBCKQ8TEA7 893 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 NOX5Q96PH1 765 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 COA1Q9GZY4 146 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 TNS1Q9HBL0 1735 aaKnown RBP13.69□□□□□ -0.22
HDAC4-208ENST00000463007 ZNF233A6NK53 670 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 KCNK3O14649 394 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 OR52Z1P0C646 297 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 PDHBP11177 359 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 EPS15P42566 896 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 SEMA3FQ13275 785 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 KCNB1Q14721 858 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 FAM114A1Q8IWE2 563 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 FAM133AQ8N9E0 248 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 AKT1S1Q96B36 256 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 COA7Q96BR5 231 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 CALML4Q96GE6 196 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 DHTKD1Q96HY7 919 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-208ENST00000463007 NUDT12Q9BQG2 462 aa13.69□□□□□ -0.22
HDAC4-208ENST00000463007 ANO9A1A5B4 782 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 MYMKA6NI61 221 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 GOLGA8KD6RF30 607 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 KLRC1P26715 233 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 CFAP221Q4G0U5 840 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 KCNV1Q6PIU1 500 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 CLEC10AQ8IUN9 316 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 SLF2Q8IX21 1173 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 MTMR4Q9NYA4 1195 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 PLAGL2Q9UPG8 496 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 MYL1P05976 194 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 NR1D1P20393 614 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 LSP1P33241 339 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 SOGA3Q5TF21 947 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 SV2BQ7L1I2 683 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 UBLCP1Q8WVY7 318 aaPredicted RBP13.68□□□□□ -0.22
HDAC4-208ENST00000463007 TSGA10Q9BZW7 698 aa13.68□□□□□ -0.22
HDAC4-208ENST00000463007 TCP1P17987 556 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms