RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 SNAP25P60880 206 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 RASSF7Q02833 373 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 COG1Q8WTW3 980 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 CRACR2AQ9BSW2 395 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 ANO3Q9BYT9 981 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 DNAJC18Q9H819 358 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 DBNDD1Q9H9R9 158 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 LCA5LO95447 670 aa18.72■□□□□ 0.59
ACTB-207ENST00000462494 NAP1L1P55209 391 aaKnown RBP18.72■□□□□ 0.59
ACTB-207ENST00000462494 CDC37Q16543 378 aaPredicted RBP18.72■□□□□ 0.59
ACTB-207ENST00000462494 SLFN13Q68D06 897 aa18.72■□□□□ 0.59
ACTB-207ENST00000462494 CREG2Q8IUH2 290 aa18.72■□□□□ 0.59
ACTB-207ENST00000462494 KIAA0825Q8IV33 1275 aa18.72■□□□□ 0.59
ACTB-207ENST00000462494 CCDC17Q96LX7 622 aa18.72■□□□□ 0.59
ACTB-207ENST00000462494 NAP1L4Q99733 375 aaKnown RBP18.72■□□□□ 0.59
ACTB-207ENST00000462494 LSM14BQ9BX40 385 aaKnown RBP18.72■□□□□ 0.59
ACTB-207ENST00000462494 TMX4Q9H1E5 349 aaPredicted RBP18.72■□□□□ 0.59
ACTB-207ENST00000462494 LRRC37AA6NMS7 1700 aa18.72■□□□□ 0.59
ACTB-207ENST00000462494 HOXA7P31268 230 aaPredicted RBP18.72■□□□□ 0.59
ACTB-207ENST00000462494 MATR3P43243 847 aaKnown RBP eCLIP18.72■□□□□ 0.59
ACTB-207ENST00000462494 CERKLQ49MI3 558 aaPredicted RBP18.72■□□□□ 0.59
ACTB-207ENST00000462494 HYIQ5T013 277 aa18.72■□□□□ 0.59
ACTB-207ENST00000462494 NFRKBQ6P4R8 1299 aa18.72■□□□□ 0.59
ACTB-207ENST00000462494 TRIM34Q9BYJ4 488 aa18.72■□□□□ 0.59
ACTB-207ENST00000462494 POTEFA5A3E0 1075 aa18.71■□□□□ 0.59
ACTB-207ENST00000462494 BUB1O43683 1085 aa18.71■□□□□ 0.59
ACTB-207ENST00000462494 MED24O75448 989 aa18.71■□□□□ 0.59
ACTB-207ENST00000462494 POTEIP0CG38 1075 aa18.71■□□□□ 0.59
ACTB-207ENST00000462494 POLR2FP61218 127 aaKnown RBP18.71■□□□□ 0.59
ACTB-207ENST00000462494 APBA1Q02410 837 aa18.71■□□□□ 0.59
ACTB-207ENST00000462494 CCDC70Q6NSX1 233 aa18.71■□□□□ 0.59
ACTB-207ENST00000462494 POTEGQ6S5H5 508 aa18.71■□□□□ 0.59
ACTB-207ENST00000462494 POTEEQ6S8J3 1075 aa18.71■□□□□ 0.59
ACTB-207ENST00000462494 SALL4Q9UJQ4 1053 aa18.71■□□□□ 0.59
ACTB-207ENST00000462494 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.71■□□□□ 0.594e-16■□□□□ 9.9
ACTB-207ENST00000462494 NCK2O43639 380 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 CYP11B2P19099 503 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 USP11P51784 963 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 IKQ13123 557 aaPredicted RBP18.7■□□□□ 0.58
ACTB-207ENST00000462494 PRR16Q569H4 304 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 FAM83BQ5T0W9 1011 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 SFMBT2Q5VUG0 894 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 FAM71BQ8TC56 605 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 OSBPL9Q96SU4 736 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 GLT8D2Q9H1C3 349 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 KCNMB3Q9NPA1 279 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 EMILIN3Q9NT22 766 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 CEP72Q9P209 647 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 PCDHA2Q9Y5H9 948 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 GOLGB1Q14789 3259 aaKnown RBP18.7■□□□□ 0.58
ACTB-207ENST00000462494 A0A0U1RQG5 324 aaPredicted RBP18.7■□□□□ 0.58
ACTB-207ENST00000462494 DDTLA6NHG4 134 aaPredicted RBP18.7■□□□□ 0.58
ACTB-207ENST00000462494 ONECUT3O60422 494 aaPredicted RBP18.7■□□□□ 0.58
ACTB-207ENST00000462494 NOL4O94818 638 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 MYBL2P10244 700 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 NPR1P16066 1061 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 EPS15P42566 896 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 ARID5AQ03989 594 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 ENOX2Q16206 610 aaKnown RBP18.7■□□□□ 0.58
ACTB-207ENST00000462494 USH1GQ495M9 461 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 SLC9C1Q4G0N8 1177 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 CCDC181Q5TID7 509 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 HGSNATQ68CP4 663 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 SCFD1Q8WVM8 642 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 CEP63Q96MT8 703 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 EHD4Q9H223 541 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 PSD3Q9NYI0 1048 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 SMARCAL1Q9NZC9 954 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 MYH10P35580 1976 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 ARFGEF1Q9Y6D6 1849 aa18.7■□□□□ 0.58
ACTB-207ENST00000462494 MEIS1O00470 390 aa18.69■□□□□ 0.58
ACTB-207ENST00000462494 MRPS25P82663 173 aaKnown RBP18.69■□□□□ 0.58
ACTB-207ENST00000462494 ADAM9Q13443 819 aa18.69■□□□□ 0.58
ACTB-207ENST00000462494 ASTE1Q2TB18 679 aaPredicted RBP18.69■□□□□ 0.58
ACTB-207ENST00000462494 FOXR2Q6PJQ5 311 aa18.69■□□□□ 0.58
ACTB-207ENST00000462494 EDEM3Q9BZQ6 932 aa18.69■□□□□ 0.58
ACTB-207ENST00000462494 HYOU1Q9Y4L1 999 aa18.69■□□□□ 0.58
ACTB-207ENST00000462494 GNA14O95837 355 aa18.69■□□□□ 0.58
ACTB-207ENST00000462494 CCNI2Q6ZMN8 369 aaPredicted RBP18.69■□□□□ 0.58
ACTB-207ENST00000462494 SLFN12Q8IYM2 578 aa18.69■□□□□ 0.58
ACTB-207ENST00000462494 DCAF4Q8WV16 495 aa18.69■□□□□ 0.58
ACTB-207ENST00000462494 MED4Q9NPJ6 270 aa18.69■□□□□ 0.58
ACTB-207ENST00000462494 EHD2Q9NZN4 543 aa18.69■□□□□ 0.58
ACTB-207ENST00000462494 HPCAL4Q9UM19 191 aa18.69■□□□□ 0.58
ACTB-207ENST00000462494 C10orf71Q711Q0 1435 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 SSU72P8A0A1W2PR75 194 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 MEIS2O14770 477 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 GDF11O95390 407 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 ALDH1B1P30837 517 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 ARHGAP4P98171 946 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 MAPK8IP2Q13387 824 aaPredicted RBP18.68■□□□□ 0.58
ACTB-207ENST00000462494 EZH2Q15910 746 aaKnown RBP18.68■□□□□ 0.58
ACTB-207ENST00000462494 ZSCAN26Q16670 478 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 ARSHQ5FYA8 562 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 NOX5Q96PH1 765 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.68■□□□□ 0.58
ACTB-207ENST00000462494 KCTD10Q9H3F6 313 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 VIPAS39Q9H9C1 493 aa18.68■□□□□ 0.58
ACTB-207ENST00000462494 TRPC5Q9UL62 973 aaPredicted RBP18.68■□□□□ 0.58
ACTB-207ENST00000462494 QSER1Q2KHR3 1735 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms