RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 TRAPPC10P48553 1259 aa13.37□□□□□ -0.27
CPNE1-221ENST00000462352 MNX1P50219 401 aaPredicted RBP13.37□□□□□ -0.27
CPNE1-221ENST00000462352 LAMC2Q13753 1193 aa13.37□□□□□ -0.27
CPNE1-221ENST00000462352 FSCN1Q16658 493 aaKnown RBP13.37□□□□□ -0.27
CPNE1-221ENST00000462352 GNASQ5JWF2 1037 aa13.37□□□□□ -0.27
CPNE1-221ENST00000462352 BRAPQ7Z569 592 aa13.37□□□□□ -0.27
CPNE1-221ENST00000462352 ANKLE1Q8NAG6 615 aa13.37□□□□□ -0.27
CPNE1-221ENST00000462352 EMID1Q96A84 441 aaPredicted RBP13.37□□□□□ -0.27
CPNE1-221ENST00000462352 UIMC1Q96RL1 719 aa13.37□□□□□ -0.27
CPNE1-221ENST00000462352 NFASCO94856 1347 aa13.37□□□□□ -0.27
CPNE1-221ENST00000462352 A6NJR5 290 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 KBTBD13C9JR72 458 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 DNM1LO00429 736 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 DHX15O43143 795 aaKnown RBP13.36□□□□□ -0.27
CPNE1-221ENST00000462352 MMP3P08254 477 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 CPT1AP50416 773 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 TOB1P50616 345 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-221ENST00000462352 RESTQ13127 1097 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 KCNA10Q16322 511 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 HSDL1Q3SXM5 330 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 RILPL1Q5EBL4 403 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 TTC38Q5R3I4 469 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 CCSAPQ6IQ19 270 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-221ENST00000462352 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 PPTC7Q8NI37 304 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 ETNPPLQ8TBG4 499 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 AFG1LQ8WV93 481 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 SPATA33Q96N06 139 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 SDF4Q9BRK5 362 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 TBC1D22BQ9NU19 505 aa13.36□□□□□ -0.27
CPNE1-221ENST00000462352 RBM19Q9Y4C8 960 aaKnown RBP13.36□□□□□ -0.27
CPNE1-221ENST00000462352 ASGR1P07306 291 aa13.35□□□□□ -0.27
CPNE1-221ENST00000462352 MCM7P33993 719 aa13.35□□□□□ -0.27
CPNE1-221ENST00000462352 SP4Q02446 784 aa13.35□□□□□ -0.27
CPNE1-221ENST00000462352 ORC2Q13416 577 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-221ENST00000462352 PKP1Q13835 747 aa13.35□□□□□ -0.27
CPNE1-221ENST00000462352 NBR1Q14596 966 aa13.35□□□□□ -0.27
CPNE1-221ENST00000462352 ZNF174Q15697 407 aa13.35□□□□□ -0.27
CPNE1-221ENST00000462352 BRDTQ58F21 947 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-221ENST00000462352 PCSK9Q8NBP7 692 aaKnown RBP13.35□□□□□ -0.27
CPNE1-221ENST00000462352 DIS3LQ8TF46 1054 aaKnown RBP13.35□□□□□ -0.27
CPNE1-221ENST00000462352 HAS1Q92839 578 aa13.35□□□□□ -0.27
CPNE1-221ENST00000462352 SLC5A5Q92911 643 aa13.35□□□□□ -0.27
CPNE1-221ENST00000462352 GJA10Q969M2 543 aa13.35□□□□□ -0.27
CPNE1-221ENST00000462352 TSEN34Q9BSV6 310 aaKnown RBP13.35□□□□□ -0.27
CPNE1-221ENST00000462352 JPH1Q9HDC5 661 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-221ENST00000462352 KCNMB3Q9NPA1 279 aa13.35□□□□□ -0.27
CPNE1-221ENST00000462352 SLC9A2Q9UBY0 812 aa13.35□□□□□ -0.27
CPNE1-221ENST00000462352 TELO2Q9Y4R8 837 aa13.35□□□□□ -0.27
CPNE1-221ENST00000462352 DOCK5Q9H7D0 1870 aa13.34□□□□□ -0.27
CPNE1-221ENST00000462352 MOXD2PA6NHM9 499 aa13.34□□□□□ -0.27
CPNE1-221ENST00000462352 DDX39AO00148 427 aaKnown RBP13.34□□□□□ -0.27
CPNE1-221ENST00000462352 NOP56O00567 594 aaKnown RBP13.34□□□□□ -0.27
CPNE1-221ENST00000462352 TBX3O15119 743 aa13.34□□□□□ -0.27
CPNE1-221ENST00000462352 ZEB2O60315 1214 aa13.34□□□□□ -0.27
CPNE1-221ENST00000462352 NEMFO60524 1076 aa13.34□□□□□ -0.27
CPNE1-221ENST00000462352 ZSCAN22P10073 491 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-221ENST00000462352 HOXD8P13378 290 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-221ENST00000462352 ACLYP53396 1101 aa13.34□□□□□ -0.27
CPNE1-221ENST00000462352 DGKDQ16760 1214 aa13.34□□□□□ -0.27
CPNE1-221ENST00000462352 LRCH2Q5VUJ6 765 aa13.34□□□□□ -0.27
CPNE1-221ENST00000462352 FOXD4L5Q5VV16 416 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-221ENST00000462352 FOXD4L4Q8WXT5 416 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-221ENST00000462352 PAWRQ96IZ0 340 aaKnown RBP13.34□□□□□ -0.27
CPNE1-221ENST00000462352 RIT2Q99578 217 aa13.34□□□□□ -0.27
CPNE1-221ENST00000462352 GPR20Q99678 358 aa13.34□□□□□ -0.27
CPNE1-221ENST00000462352 ZSCAN16Q9H4T2 348 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-221ENST00000462352 PHF24Q9UPV7 400 aa13.34□□□□□ -0.27
CPNE1-221ENST00000462352 PCDHB6Q9Y5E3 794 aa13.34□□□□□ -0.27
CPNE1-221ENST00000462352 MARCH6O60337 910 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 GAS7O60861 476 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 PPFIA4O75335 1185 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 PSMD10O75832 226 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 CCNE2O96020 404 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 MYL3P08590 195 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 COL6A1P12109 1028 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 ACTR2P61160 394 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 PURAQ00577 322 aaKnown RBP13.33□□□□□ -0.28
CPNE1-221ENST00000462352 CALCRLQ16602 461 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 FAM173BQ6P4H8 233 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 CXCL17Q6UXB2 119 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 UBE2Q1Q7Z7E8 422 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 SLFN12Q8IYM2 578 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 SEPT1Q8WYJ6 367 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 FAM20AQ96MK3 541 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 TEKT3Q9BXF9 490 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 TMEM60Q9H2L4 133 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.33□□□□□ -0.28
CPNE1-221ENST00000462352 POLR3EQ9NVU0 708 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 DAXXQ9UER7 740 aaPredicted RBP13.33□□□□□ -0.28
CPNE1-221ENST00000462352 ELP1O95163 1332 aa13.33□□□□□ -0.28
CPNE1-221ENST00000462352 A0A1W2PQ45 241 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-221ENST00000462352 GSTTP1A0A1W2PQM5 241 aa13.32□□□□□ -0.28
CPNE1-221ENST00000462352 A0A1W2PQY0 241 aa13.32□□□□□ -0.28
CPNE1-221ENST00000462352 KPNA6O60684 536 aa13.32□□□□□ -0.28
CPNE1-221ENST00000462352 BAG4O95429 457 aaKnown RBP13.32□□□□□ -0.28
CPNE1-221ENST00000462352 BRD1O95696 1058 aa13.32□□□□□ -0.28
CPNE1-221ENST00000462352 F13A1P00488 732 aa13.32□□□□□ -0.28
CPNE1-221ENST00000462352 TCF7P36402 384 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-221ENST00000462352 KRT76Q01546 638 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms