RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 CSADQ9Y600 493 aa6.85□□□□□ -1.31
SPTA1-202ENST00000461624 CACNA1BQ00975 2339 aa6.85□□□□□ -1.31
SPTA1-202ENST00000461624 ZFHX2Q9C0A1 2572 aaPredicted RBP6.85□□□□□ -1.31
SPTA1-202ENST00000461624 AK9Q5TCS8 1911 aa6.84□□□□□ -1.31
SPTA1-202ENST00000461624 KMT2BQ9UMN6 2715 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-202ENST00000461624 GADD45BO75293 160 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-202ENST00000461624 FKBP1AP62942 108 aaKnown RBP6.84□□□□□ -1.31
SPTA1-202ENST00000461624 RPS26P11Q5JNZ5 115 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-202ENST00000461624 DYMQ7RTS9 669 aa6.84□□□□□ -1.31
SPTA1-202ENST00000461624 ANKRD18AQ8IVF6 992 aa6.84□□□□□ -1.31
SPTA1-202ENST00000461624 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-202ENST00000461624 AGBL5Q8NDL9 886 aa6.84□□□□□ -1.31
SPTA1-202ENST00000461624 NPHS2Q9NP85 383 aa6.84□□□□□ -1.31
SPTA1-202ENST00000461624 FAM105AQ9NUU6 356 aa6.84□□□□□ -1.31
SPTA1-202ENST00000461624 PPP4R2Q9NY27 417 aa6.84□□□□□ -1.31
SPTA1-202ENST00000461624 ZNF70Q9UC06 446 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-202ENST00000461624 CACNA1GO43497 2377 aa6.84□□□□□ -1.31
SPTA1-202ENST00000461624 VPS13AQ96RL7 3174 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 CACNA1HO95180 2353 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 ZNF318Q5VUA4 2279 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 TCF20Q9UGU0 1960 aaKnown RBP6.83□□□□□ -1.32
SPTA1-202ENST00000461624 MYO1BO43795 1136 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 PDE8AO60658 829 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 PCCAP05165 728 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-202ENST00000461624 U2AF1L5P0DN76 240 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-202ENST00000461624 CYP2C8P10632 490 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 ASPAP45381 313 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 SMAD3P84022 425 aaKnown RBP6.83□□□□□ -1.32
SPTA1-202ENST00000461624 HNRNPUQ00839 825 aaKnown RBP eCLIP6.83□□□□□ -1.32
SPTA1-202ENST00000461624 U2AF1Q01081 240 aaKnown RBP eCLIP6.83□□□□□ -1.32
SPTA1-202ENST00000461624 TNFAIP1Q13829 316 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 MAP3K21Q5TCX8 1036 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 SEZ6L2Q6UXD5 910 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 TP53INP2Q8IXH6 220 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 ZKSCAN4Q969J2 545 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-202ENST00000461624 UHRF1Q96T88 793 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-202ENST00000461624 PARK7Q99497 189 aaKnown RBP6.83□□□□□ -1.32
SPTA1-202ENST00000461624 LRFN3Q9BTN0 628 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 BCL11AQ9H165 835 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 CD209Q9NNX6 404 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 ABCB6Q9NP58 842 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 CHPF2Q9P2E5 772 aa6.83□□□□□ -1.32
SPTA1-202ENST00000461624 PKD1L2Q7Z442 2459 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 ECEL1O95672 775 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 HMGCRP04035 888 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 IL1R1P14778 569 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 PPATQ06203 517 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 PDE3AQ14432 1141 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 NFE2L2Q16236 605 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 KRT24Q2M2I5 525 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 C9orf50Q5SZB4 431 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 C15orf52Q6ZUT6 534 aaKnown RBP6.82□□□□□ -1.32
SPTA1-202ENST00000461624 ZNF765Q7L2R6 523 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 FLCNQ8NFG4 579 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 ATXN2LQ8WWM7 1075 aaKnown RBP6.82□□□□□ -1.32
SPTA1-202ENST00000461624 ASB2Q96Q27 587 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 WRNIP1Q96S55 665 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 PLEKHF1Q96S99 279 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 WDR18Q9BV38 432 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 C1QTNF1Q9BXJ1 281 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 BABAM1Q9NWV8 329 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 TSPYL4Q9UJ04 414 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 PHIPQ8WWQ0 1821 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 ZNF292O60281 2723 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 RLFQ13129 1914 aa6.82□□□□□ -1.32
SPTA1-202ENST00000461624 RPAP1Q9BWH6 1393 aaPredicted RBP6.82□□□□□ -1.32
SPTA1-202ENST00000461624 ANKRD11Q6UB99 2663 aaPredicted RBP6.81□□□□□ -1.32
SPTA1-202ENST00000461624 F8W031 263 aaPredicted RBP6.81□□□□□ -1.32
SPTA1-202ENST00000461624 LDHBP07195 334 aaKnown RBP6.81□□□□□ -1.32
SPTA1-202ENST00000461624 P4HBP07237 508 aaKnown RBP6.81□□□□□ -1.32
SPTA1-202ENST00000461624 HSP90B1P14625 803 aaKnown RBP6.81□□□□□ -1.32
SPTA1-202ENST00000461624 ITGB5P18084 799 aa6.81□□□□□ -1.32
SPTA1-202ENST00000461624 CTSWP56202 376 aa6.81□□□□□ -1.32
SPTA1-202ENST00000461624 SHHQ15465 462 aa6.81□□□□□ -1.32
SPTA1-202ENST00000461624 DNAJC14Q6Y2X3 702 aaPredicted RBP6.81□□□□□ -1.32
SPTA1-202ENST00000461624 TTLL11Q8NHH1 800 aa6.81□□□□□ -1.32
SPTA1-202ENST00000461624 FRMD6Q96NE9 622 aa6.81□□□□□ -1.32
SPTA1-202ENST00000461624 CDC5LQ99459 802 aaKnown RBP6.81□□□□□ -1.32
SPTA1-202ENST00000461624 GREM2Q9H772 168 aa6.81□□□□□ -1.32
SPTA1-202ENST00000461624 TDRD3Q9H7E2 651 aaKnown RBP6.81□□□□□ -1.32
SPTA1-202ENST00000461624 C1GALT1Q9NS00 363 aa6.81□□□□□ -1.32
SPTA1-202ENST00000461624 ZC3H7BQ9UGR2 993 aaKnown RBP6.81□□□□□ -1.32
SPTA1-202ENST00000461624 RIF1Q5UIP0 2472 aaKnown RBP6.81□□□□□ -1.32
SPTA1-202ENST00000461624 BAHCC1Q9P281 2608 aa6.8□□□□□ -1.32
SPTA1-202ENST00000461624 TCP10L2B9ZVM9 353 aa6.8□□□□□ -1.32
SPTA1-202ENST00000461624 SNAP23O00161 211 aa6.8□□□□□ -1.32
SPTA1-202ENST00000461624 TNPO2O14787 897 aaKnown RBP6.8□□□□□ -1.32
SPTA1-202ENST00000461624 GIPC1O14908 333 aa6.8□□□□□ -1.32
SPTA1-202ENST00000461624 JUNBP17275 347 aaPredicted RBP6.8□□□□□ -1.32
SPTA1-202ENST00000461624 OGFOD3Q6PK18 319 aa6.8□□□□□ -1.32
SPTA1-202ENST00000461624 CCDC191Q8NCU4 936 aa6.8□□□□□ -1.32
SPTA1-202ENST00000461624 JARID2Q92833 1246 aaPredicted RBP6.8□□□□□ -1.32
SPTA1-202ENST00000461624 ASIC4Q96FT7 647 aa6.8□□□□□ -1.32
SPTA1-202ENST00000461624 NECAB3Q96P71 396 aaPredicted RBP6.8□□□□□ -1.32
SPTA1-202ENST00000461624 LRRC4CQ9HCJ2 640 aa6.8□□□□□ -1.32
SPTA1-202ENST00000461624 THEGQ9P2T0 379 aa6.8□□□□□ -1.32
SPTA1-202ENST00000461624 ZNF112Q9UJU3 913 aa6.8□□□□□ -1.32
SPTA1-202ENST00000461624 GJD2Q9UKL4 321 aa6.8□□□□□ -1.32
SPTA1-202ENST00000461624 NUDCQ9Y266 331 aa6.8□□□□□ -1.32
SPTA1-202ENST00000461624 DAGLAQ9Y4D2 1042 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms