RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CDKN1CP49918 316 aaPredicted RBP4.16□□□□□ -1.74
HDAC6-212ENST00000461608 NR0B2Q15466 257 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 INF2Q27J81 1249 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 ZXDCQ2QGD7 858 aaPredicted RBP4.16□□□□□ -1.74
HDAC6-212ENST00000461608 TMEM177Q53S58 311 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 GALNT18Q6P9A2 607 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 C11orf74Q86VG3 221 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 DDX42Q86XP3 938 aaKnown RBP eCLIP4.16□□□□□ -1.74
HDAC6-212ENST00000461608 PDZD8Q8NEN9 1154 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 PCDH19Q8TAB3 1148 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 CXorf38Q8TB03 319 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 WDR66Q8TBY9 1149 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 LINC01599Q8WXQ3 324 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 CHAMP1Q96JM3 812 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 PUS7LQ9H0K6 701 aaKnown RBP4.16□□□□□ -1.74
HDAC6-212ENST00000461608 SP110Q9HB58 689 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 SLAMF8Q9P0V8 285 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 B4GALT6Q9UBX8 382 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 X6R8D5 127 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 A0A1W2PQ27 194 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 A0A1W2PQ64 194 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 A0A1W2PQC6 194 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 A0A1W2PQD8 194 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 M0R2C6 588 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 KRIT1O00522 736 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 NRDCO43847 1150 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 MSCO60682 206 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 DGKIO75912 1065 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 ZGLP1P0C6A0 271 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 GNAT1P11488 350 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 LCP1P13796 627 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 LSSP48449 732 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 IL2P60568 153 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 DSG1Q02413 1049 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 STRN3Q13033 797 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 SEPT7Q16181 437 aaKnown RBP4.15□□□□□ -1.75
HDAC6-212ENST00000461608 FIGNQ5HY92 759 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 ODR4Q5SWX8 454 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 MBLAC2Q68D91 279 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 OTOP1Q7RTM1 612 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 CPNE8Q86YQ8 564 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 LILRA2Q8N149 483 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 IGSF22Q8N9C0 903 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 TRMT2BQ96GJ1 504 aaKnown RBP4.15□□□□□ -1.75
HDAC6-212ENST00000461608 G6PC3Q9BUM1 346 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 BOCQ9BWV1 1114 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 IPPKQ9H8X2 491 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 CLDND1Q9NY35 253 aa4.15□□□□□ -1.75
HDAC6-212ENST00000461608 H7C1D1 291 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 HIP1RO75146 1068 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 CKMP06732 381 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 KCNA6P17658 529 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 ARL4AP40617 200 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 BCL6P41182 706 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 SLC6A11P48066 632 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 MECP2P51608 486 aaKnown RBP4.14□□□□□ -1.75
HDAC6-212ENST00000461608 GUCY2FP51841 1108 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 EPHB1P54762 984 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 RTP1P59025 263 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 LACTBP83111 547 aaPredicted RBP4.14□□□□□ -1.75
HDAC6-212ENST00000461608 STAT4Q14765 748 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 PCBP1Q15365 356 aaKnown RBP eCLIP4.14□□□□□ -1.75
HDAC6-212ENST00000461608 GPR19Q15760 415 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 HSF5Q4G112 596 aaPredicted RBP4.14□□□□□ -1.75
HDAC6-212ENST00000461608 TIGD5Q53EQ6 642 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 CCDC181Q5TID7 509 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 HHIPL2Q6UWX4 724 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 CEP128Q6ZU80 1094 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 OVCH1Q7RTY7 1134 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 NLRP10Q86W26 655 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 DCP2Q8IU60 420 aaKnown RBP4.14□□□□□ -1.75
HDAC6-212ENST00000461608 PASD1Q8IV76 773 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 NLGN4XQ8N0W4 816 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 EFHBQ8N7U6 833 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 UBR7Q8N806 425 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 C2orf69Q8N8R5 385 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 NETO2Q8NC67 525 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 SMC1BQ8NDV3 1235 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 PHOSPHO1Q8TCT1 267 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 STAG1Q8WVM7 1258 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 MYLIPQ8WY64 445 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 HHIPL1Q96JK4 782 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 MTFR1LQ9H019 292 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 PDLIM7Q9NR12 457 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 RTEL1Q9NZ71 1219 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 MARCH2Q9P0N8 246 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 NUDT5Q9UKK9 219 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 PALD1Q9ULE6 856 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 COQ6Q9Y2Z9 468 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 SPEF1Q9Y4P9 236 aa4.14□□□□□ -1.75
HDAC6-212ENST00000461608 A0A0G2JLL6 359 aaPredicted RBP4.13□□□□□ -1.75
HDAC6-212ENST00000461608 A0A1W2PQJ5 194 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 SLC12A8A0AV02 714 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 E2F8A0AVK6 867 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 K7ESF4 209 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 ARNTLO00327 626 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 USP2O75604 605 aaPredicted RBP4.13□□□□□ -1.75
HDAC6-212ENST00000461608 SRGAP2CP0DJJ0 459 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 PYGMP11217 842 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 GJA4P35212 333 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms