RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 SLC5A5Q92911 643 aa12.79□□□□□ -0.36
SSBP1-202ENST00000461433 GJA10Q969M2 543 aa12.79□□□□□ -0.36
SSBP1-202ENST00000461433 NAP1L4Q99733 375 aaKnown RBP12.79□□□□□ -0.36
SSBP1-202ENST00000461433 TMEM106CQ9BVX2 250 aa12.79□□□□□ -0.36
SSBP1-202ENST00000461433 KCNMB3Q9NPA1 279 aa12.79□□□□□ -0.36
SSBP1-202ENST00000461433 PCDHB6Q9Y5E3 794 aa12.79□□□□□ -0.36
SSBP1-202ENST00000461433 NFASCO94856 1347 aa12.78□□□□□ -0.36
SSBP1-202ENST00000461433 IPO5O00410 1097 aaKnown RBP12.78□□□□□ -0.36
SSBP1-202ENST00000461433 SORBS3O60504 671 aa12.78□□□□□ -0.36
SSBP1-202ENST00000461433 BRD1O95696 1058 aa12.78□□□□□ -0.36
SSBP1-202ENST00000461433 NEDD9Q14511 834 aa12.78□□□□□ -0.36
SSBP1-202ENST00000461433 LRRC41Q15345 812 aa12.78□□□□□ -0.36
SSBP1-202ENST00000461433 ZNF174Q15697 407 aa12.78□□□□□ -0.36
SSBP1-202ENST00000461433 HSDL1Q3SXM5 330 aa12.78□□□□□ -0.36
SSBP1-202ENST00000461433 RILPL1Q5EBL4 403 aa12.78□□□□□ -0.36
SSBP1-202ENST00000461433 TTC38Q5R3I4 469 aa12.78□□□□□ -0.36
SSBP1-202ENST00000461433 METTL7BQ6UX53 244 aa12.78□□□□□ -0.36
SSBP1-202ENST00000461433 DHX37Q8IY37 1157 aaKnown RBP12.78□□□□□ -0.36
SSBP1-202ENST00000461433 C4orf32Q8N8J7 132 aa12.78□□□□□ -0.36
SSBP1-202ENST00000461433 OR6J1Q8NGC5 347 aa12.78□□□□□ -0.36
SSBP1-202ENST00000461433 ZNF577Q9BSK1 485 aa12.78□□□□□ -0.36
SSBP1-202ENST00000461433 TMEM60Q9H2L4 133 aa12.78□□□□□ -0.36
SSBP1-202ENST00000461433 ZSCAN16Q9H4T2 348 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-202ENST00000461433 NOL7Q9UMY1 257 aaKnown RBP12.78□□□□□ -0.36
SSBP1-202ENST00000461433 KIAA0100Q14667 2235 aaKnown RBP12.78□□□□□ -0.36
SSBP1-202ENST00000461433 A6NJR5 290 aa12.77□□□□□ -0.36
SSBP1-202ENST00000461433 PSMD10O75832 226 aa12.77□□□□□ -0.36
SSBP1-202ENST00000461433 C6orf222P0C671 652 aaPredicted RBP12.77□□□□□ -0.36
SSBP1-202ENST00000461433 CST5P28325 142 aaPredicted RBP12.77□□□□□ -0.36
SSBP1-202ENST00000461433 MCM7P33993 719 aa12.77□□□□□ -0.36
SSBP1-202ENST00000461433 BEX3Q00994 111 aa12.77□□□□□ -0.36
SSBP1-202ENST00000461433 LAMC2Q13753 1193 aa12.77□□□□□ -0.36
SSBP1-202ENST00000461433 FOXD4L5Q5VV16 416 aaPredicted RBP12.77□□□□□ -0.36
SSBP1-202ENST00000461433 GIMAP8Q8ND71 665 aaPredicted RBP12.77□□□□□ -0.36
SSBP1-202ENST00000461433 AFG1LQ8WV93 481 aa12.77□□□□□ -0.36
SSBP1-202ENST00000461433 FOXD4L4Q8WXT5 416 aaPredicted RBP12.77□□□□□ -0.36
SSBP1-202ENST00000461433 MTMR9Q96QG7 549 aa12.77□□□□□ -0.36
SSBP1-202ENST00000461433 MLXIPQ9HAP2 919 aa12.77□□□□□ -0.36
SSBP1-202ENST00000461433 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.77□□□□□ -0.36
SSBP1-202ENST00000461433 WDR81Q562E7 1941 aa12.77□□□□□ -0.37
SSBP1-202ENST00000461433 TBX3O15119 743 aa12.77□□□□□ -0.37
SSBP1-202ENST00000461433 CCNE2O96020 404 aa12.77□□□□□ -0.37
SSBP1-202ENST00000461433 F13A1P00488 732 aa12.77□□□□□ -0.37
SSBP1-202ENST00000461433 TFRCP02786 760 aaKnown RBP12.77□□□□□ -0.37
SSBP1-202ENST00000461433 EN2P19622 333 aaPredicted RBP12.77□□□□□ -0.37
SSBP1-202ENST00000461433 ORC2Q13416 577 aaPredicted RBP12.77□□□□□ -0.37
SSBP1-202ENST00000461433 FSCN1Q16658 493 aaKnown RBP12.77□□□□□ -0.37
SSBP1-202ENST00000461433 B3GNT9Q6UX72 402 aa12.77□□□□□ -0.37
SSBP1-202ENST00000461433 PPTC7Q8NI37 304 aa12.77□□□□□ -0.37
SSBP1-202ENST00000461433 FAM20AQ96MK3 541 aa12.77□□□□□ -0.37
SSBP1-202ENST00000461433 SPATA33Q96N06 139 aa12.77□□□□□ -0.37
SSBP1-202ENST00000461433 RIT2Q99578 217 aa12.77□□□□□ -0.37
SSBP1-202ENST00000461433 AP5M1Q9H0R1 490 aa12.77□□□□□ -0.37
SSBP1-202ENST00000461433 TBC1D22BQ9NU19 505 aa12.77□□□□□ -0.37
SSBP1-202ENST00000461433 GSTTP1A0A1W2PQM5 241 aa12.76□□□□□ -0.37
SSBP1-202ENST00000461433 NEMFO60524 1076 aa12.76□□□□□ -0.37
SSBP1-202ENST00000461433 MMP3P08254 477 aa12.76□□□□□ -0.37
SSBP1-202ENST00000461433 HOXD8P13378 290 aaPredicted RBP12.76□□□□□ -0.37
SSBP1-202ENST00000461433 KCNA10Q16322 511 aa12.76□□□□□ -0.37
SSBP1-202ENST00000461433 GNASQ5JWF2 1037 aa12.76□□□□□ -0.37
SSBP1-202ENST00000461433 RNF180Q86T96 592 aa12.76□□□□□ -0.37
SSBP1-202ENST00000461433 ARRDC4Q8NCT1 418 aa12.76□□□□□ -0.37
SSBP1-202ENST00000461433 GPR20Q99678 358 aa12.76□□□□□ -0.37
SSBP1-202ENST00000461433 SDF4Q9BRK5 362 aa12.76□□□□□ -0.37
SSBP1-202ENST00000461433 JPH1Q9HDC5 661 aaPredicted RBP12.76□□□□□ -0.37
SSBP1-202ENST00000461433 SLC9A2Q9UBY0 812 aa12.76□□□□□ -0.37
SSBP1-202ENST00000461433 CCDC85CA6NKD9 419 aa12.75□□□□□ -0.37
SSBP1-202ENST00000461433 DDX39AO00148 427 aaKnown RBP12.75□□□□□ -0.37
SSBP1-202ENST00000461433 DNM1LO00429 736 aa12.75□□□□□ -0.37
SSBP1-202ENST00000461433 ATG7O95352 703 aa12.75□□□□□ -0.37
SSBP1-202ENST00000461433 CPT1AP50416 773 aa12.75□□□□□ -0.37
SSBP1-202ENST00000461433 PTGDRQ13258 359 aa12.75□□□□□ -0.37
SSBP1-202ENST00000461433 CALCRLQ16602 461 aa12.75□□□□□ -0.37
SSBP1-202ENST00000461433 LRCH2Q5VUJ6 765 aa12.75□□□□□ -0.37
SSBP1-202ENST00000461433 IPO9Q96P70 1041 aaKnown RBP12.75□□□□□ -0.37
SSBP1-202ENST00000461433 FTOQ9C0B1 505 aaKnown RBP eCLIP12.75□□□□□ -0.37
SSBP1-202ENST00000461433 SPC25Q9HBM1 224 aa12.75□□□□□ -0.37
SSBP1-202ENST00000461433 VAV3Q9UKW4 847 aa12.75□□□□□ -0.37
SSBP1-202ENST00000461433 PPFIA4O75335 1185 aa12.74□□□□□ -0.37
SSBP1-202ENST00000461433 ASGR1P07306 291 aa12.74□□□□□ -0.37
SSBP1-202ENST00000461433 CAPN2P17655 700 aa12.74□□□□□ -0.37
SSBP1-202ENST00000461433 ACTR2P61160 394 aa12.74□□□□□ -0.37
SSBP1-202ENST00000461433 SP4Q02446 784 aa12.74□□□□□ -0.37
SSBP1-202ENST00000461433 SPIRE1Q08AE8 756 aa12.74□□□□□ -0.37
SSBP1-202ENST00000461433 UBE2Q1Q7Z7E8 422 aa12.74□□□□□ -0.37
SSBP1-202ENST00000461433 ANKLE1Q8NAG6 615 aa12.74□□□□□ -0.37
SSBP1-202ENST00000461433 DIS3LQ8TF46 1054 aaKnown RBP12.74□□□□□ -0.37
SSBP1-202ENST00000461433 TSEN34Q9BSV6 310 aaKnown RBP12.74□□□□□ -0.37
SSBP1-202ENST00000461433 UNC45AQ9H3U1 944 aa12.74□□□□□ -0.37
SSBP1-202ENST00000461433 DAXXQ9UER7 740 aaPredicted RBP12.74□□□□□ -0.37
SSBP1-202ENST00000461433 CLIC4Q9Y696 253 aa12.74□□□□□ -0.37
SSBP1-202ENST00000461433 GAS7O60861 476 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 MYCNP04198 464 aaPredicted RBP12.73□□□□□ -0.37
SSBP1-202ENST00000461433 COL6A1P12109 1028 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 ACLYP53396 1101 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 SOX10P56693 466 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 ATP2C1P98194 919 aaPredicted RBP12.73□□□□□ -0.37
SSBP1-202ENST00000461433 PURAQ00577 322 aaKnown RBP12.73□□□□□ -0.37
SSBP1-202ENST00000461433 PPP2R5CQ13362 524 aa12.73□□□□□ -0.37
SSBP1-202ENST00000461433 PTPAQ15257 358 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms