RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 NUB1Q9Y5A7 615 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 KCNK3O14649 394 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 MAFKO60675 156 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 ZGLP1P0C6A0 271 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 CD8BP10966 210 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 ATP2A2P16615 1042 aaKnown RBP4.23□□□□□ -1.73
VCL-203ENST00000461383 FUT4P22083 530 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 CCND1P24385 295 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 TACR1P25103 407 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 JAM2P57087 298 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 CORO7P57737 925 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 IRF9Q00978 393 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 CHRNEQ04844 493 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 PPP2R5AQ15172 486 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 CHRNA2Q15822 529 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 DDB1Q16531 1140 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 RALGPS1Q5JS13 557 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 MROH9Q5TGP6 573 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 SYDE2Q5VT97 1194 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 BICRALQ6AI39 1079 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 GALNT18Q6P9A2 607 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 ARHGAP36Q6ZRI8 547 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 SLCO6A1Q86UG4 719 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 SPPL2CQ8IUH8 684 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 WDR75Q8IWA0 830 aaKnown RBP4.23□□□□□ -1.73
VCL-203ENST00000461383 DPF3Q92784 378 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 ASPSCR1Q9BZE9 553 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 ADAMTS10Q9H324 1103 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 IMPACTQ9P2X3 320 aa4.23□□□□□ -1.73
VCL-203ENST00000461383 THRAP3Q9Y2W1 955 aaKnown RBP4.23□□□□□ -1.73
VCL-203ENST00000461383 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.23□□□□□ -1.73
VCL-203ENST00000461383 WASHC2AQ641Q2 1341 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.22□□□□□ -1.73
VCL-203ENST00000461383 FITM1A5D6W6 292 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 BIN1O00499 593 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 SCDO00767 359 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 PRKD3O94806 890 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 PRKCAP17252 672 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 MECP2P51608 486 aaKnown RBP4.22□□□□□ -1.73
VCL-203ENST00000461383 NEK2P51955 445 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 SESN3P58005 492 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 LACTBP83111 547 aaPredicted RBP4.22□□□□□ -1.73
VCL-203ENST00000461383 ZNF792Q3KQV3 632 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 HSF5Q4G112 596 aaPredicted RBP4.22□□□□□ -1.73
VCL-203ENST00000461383 OTOP3Q7RTS5 596 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 SPRED2Q7Z698 418 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 ATG4DQ86TL0 474 aaPredicted RBP4.22□□□□□ -1.73
VCL-203ENST00000461383 PTRH1Q86Y79 214 aaKnown RBP4.22□□□□□ -1.73
VCL-203ENST00000461383 NLGN4XQ8N0W4 816 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 EFHBQ8N7U6 833 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 PDZD8Q8NEN9 1154 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 PIP4K2CQ8TBX8 421 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 LINC01599Q8WXQ3 324 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 SLC5A5Q92911 643 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 AHCYL2Q96HN2 611 aaKnown RBP4.22□□□□□ -1.73
VCL-203ENST00000461383 YIPF4Q9BSR8 244 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 CRTAC1Q9NQ79 661 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 PDLIM7Q9NR12 457 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 TOMM22Q9NS69 142 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 OXSMQ9NWU1 459 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 H2AFY2Q9P0M6 372 aaPredicted RBP4.22□□□□□ -1.73
VCL-203ENST00000461383 DSEQ9UL01 958 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 ZNF281Q9Y2X9 895 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 X6R8D5 127 aa4.22□□□□□ -1.73
VCL-203ENST00000461383 CARMIL2Q6F5E8 1435 aa4.21□□□□□ -1.73
VCL-203ENST00000461383 ZNF561-AS1K7EIQ3 104 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 NKRFO15226 690 aaKnown RBP eCLIP4.21□□□□□ -1.74
VCL-203ENST00000461383 NTRK1P04629 796 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 CT47B1P0C2W7 299 aaPredicted RBP4.21□□□□□ -1.74
VCL-203ENST00000461383 MYBL2P10244 700 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 RAC2P15153 192 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 SLC9A1P19634 815 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 ARL4AP40617 200 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 KIF11P52732 1056 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 CYP4F8P98187 520 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 PLCL1Q15111 1095 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 PTPN21Q16825 1174 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 ABCB5Q2M3G0 1257 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 STEAP3Q658P3 488 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 ZNF574Q6ZN55 896 aaPredicted RBP4.21□□□□□ -1.74
VCL-203ENST00000461383 OTOP1Q7RTM1 612 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 Q8N1Y9 231 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 KIAA1958Q8N8K9 716 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 NLGN2Q8NFZ4 835 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 PLEKHO2Q8TD55 490 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 CHMP4CQ96CF2 233 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 G6PC3Q9BUM1 346 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 TRIM8Q9BZR9 551 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 CD244Q9BZW8 370 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 AP5M1Q9H0R1 490 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 CDIP1Q9H305 208 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 SP110Q9HB58 689 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 SLC6A20Q9NP91 592 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 PRDM7Q9NQW5 492 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 GPR160Q9UJ42 338 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 ZNF652Q9Y2D9 606 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 NOC2LQ9Y3T9 749 aaKnown RBP4.21□□□□□ -1.74
VCL-203ENST00000461383 SPEF1Q9Y4P9 236 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 ATP23Q9Y6H3 246 aa4.21□□□□□ -1.74
VCL-203ENST00000461383 E2F8A0AVK6 867 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms