RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	SRGAP3	O43295	1099 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	CREB3	O43889	395 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	SUSD5	O60279	629 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	ITGAV	P06756	1048 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	GLI4	P10075	376 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	TACR1	P25103	407 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	PML	P29590	882 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	SOX5	P35711	763 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	ARL4A	P40617	200 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	EPHB1	P54762	984 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	CORO7	P57737	925 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	SCRN1	Q12765	414 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	RAB3GAP1	Q15042	981 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	SF1	Q15637	639 aa	Known RBP	4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	LONRF2	Q1L5Z9	754 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	INF2	Q27J81	1249 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	PLEKHN1	Q494U1	663 aa	Predicted RBP	4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	FBLN7	Q53RD9	439 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	SYCP2L	Q5T4T6	812 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	TMEM132E	Q6IEE7	984 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	DENND5A	Q6IQ26	1287 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	DDX46	Q7L014	1031 aa	Known RBP	4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	TICAM2	Q86XR7	235 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	CHPF	Q8IZ52	775 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	AFAP1L2	Q8N4X5	818 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	KREMEN2	Q8NCW0	462 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	TTC8	Q8TAM2	541 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	NPLOC4	Q8TAT6	608 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	FRS2	Q8WU20	508 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	LEO1	Q8WVC0	666 aa	Predicted RBP	4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	TOX2	Q96NM4	488 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	DHRS4	Q9BTZ2	278 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	MTFR1L	Q9H019	292 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	ARNT2	Q9HBZ2	717 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	CYP26B1	Q9NR63	512 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	CLEC1B	Q9P126	229 aa		4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	TMEFF2	Q9UIK5	374 aa	Predicted RBP	4.2	□□□□□ -1.74
FXR1-204	ENST00000461044	CUL7	Q14999	1698 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	CCDC163	A0A0D9SF12	145 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	C7orf72	A4D263	438 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	ABLIM1	O14639	778 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	PLD2	O14939	933 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	N4BP3	O15049	544 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	AKAP10	O43572	662 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	CAND2	O75155	1236 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	RASGRP1	O95267	797 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	SCGB1D2	O95969	90 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	CYBB	P04839	570 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	THBD	P07204	575 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	PLS3	P13797	630 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	MAPKAPK2	P49137	400 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	SEPHS1	P49903	392 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	NCKAP1L	P55160	1127 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	KRTAP19-4	Q3LI73	84 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	FNDC3B	Q53EP0	1204 aa	Known RBP	4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	PAQR3	Q6TCH7	311 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	TMC6	Q7Z403	805 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	ZNF227	Q86WZ6	799 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	SIAH1	Q8IUQ4	282 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	MZB1	Q8WU39	189 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	BTN2A2	Q8WVV5	523 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	DDX1	Q92499	740 aa	Known RBP	4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	MMP19	Q99542	508 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	TRIM8	Q9BZR9	551 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	NKX2-4	Q9H2Z4	354 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	RXFP1	Q9HBX9	757 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	NCOA5	Q9HCD5	579 aa	Known RBP	4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	ARHGEF4	Q9NR80	690 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	SIRT5	Q9NXA8	310 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	ZIM2	Q9NZV7	527 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	GULP1	Q9UBP9	304 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	MCM8	Q9UJA3	840 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	MAPRE3	Q9UPY8	281 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	KCTD3	Q9Y597	815 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	SRCAP	Q6ZRS2	3230 aa		4.19	□□□□□ -1.74
FXR1-204	ENST00000461044	GRIN2B	Q13224	1484 aa		4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	NPHP3-ACAD11	A0A0J9YXS1	232 aa		4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	ZC3H12D	A2A288	527 aa	Known RBP	4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	PRPF3	O43395	683 aa	Known RBP	4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	LDHA	P00338	332 aa	Known RBP	4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	SCG5	P05408	212 aa		4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	ZSCAN22	P10073	491 aa	Predicted RBP	4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	PAM	P19021	973 aa		4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	PAX3	P23760	479 aa		4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	IGFBP6	P24592	240 aa	Predicted RBP	4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	GRIA2	P42262	883 aa		4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	STRN3	Q13033	797 aa		4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	MTMR1	Q13613	665 aa		4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	NR1I3	Q14994	352 aa		4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	BICRAL	Q6AI39	1079 aa		4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	LRRTM3	Q86VH5	581 aa		4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	CCDC103	Q8IW40	242 aa		4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	LRRC47	Q8N1G4	583 aa	Known RBP	4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	MYO1H	Q8N1T3	1032 aa		4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	PLEKHO2	Q8TD55	490 aa		4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	DACT3	Q96B18	629 aa	Predicted RBP	4.18	□□□□□ -1.74
FXR1-204	ENST00000461044	C1orf159	Q96HA4	380 aa		4.18	□□□□□ -1.74

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