RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TBC1D32Q96NH3 1257 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 GUCD1Q96NT3 240 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 CDX2Q99626 313 aaPredicted RBP15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 MLXIPQ9HAP2 919 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 C6orf50Q9HD87 102 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 KIAA1217Q5T5P2 1943 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 ESYT2A0FGR8 921 aa15.14■□□□□ 0.01
RAB11FIP3-207ENST00000461009 PITPNM1O00562 1244 aa15.14■□□□□ 0.01
RAB11FIP3-207ENST00000461009 PPFIA4O75335 1185 aa15.14■□□□□ 0.01
RAB11FIP3-207ENST00000461009 XBP1P17861 261 aa15.14■□□□□ 0.01
RAB11FIP3-207ENST00000461009 PTGISQ16647 500 aa15.14■□□□□ 0.01
RAB11FIP3-207ENST00000461009 OTOP2Q7RTS6 562 aa15.14■□□□□ 0.01
RAB11FIP3-207ENST00000461009 GTF3C6Q969F1 213 aa15.14■□□□□ 0.01
RAB11FIP3-207ENST00000461009 SPATA33Q96N06 139 aa15.14■□□□□ 0.01
RAB11FIP3-207ENST00000461009 ZMYND12Q9H0C1 365 aa15.14■□□□□ 0.01
RAB11FIP3-207ENST00000461009 SH2B1Q9NRF2 756 aaPredicted RBP15.14■□□□□ 0.01
RAB11FIP3-207ENST00000461009 SLC4A7Q9Y6M7 1214 aa15.14■□□□□ 0.01
RAB11FIP3-207ENST00000461009 UMODL1Q5DID0 1318 aa15.14■□□□□ 0.01
RAB11FIP3-207ENST00000461009 ZBBXA8MT70 800 aa15.13■□□□□ 0.01
RAB11FIP3-207ENST00000461009 UBE2SQ16763 222 aa15.13■□□□□ 0.01
RAB11FIP3-207ENST00000461009 CELF3Q5SZQ8 465 aaKnown RBP15.13■□□□□ 0.01
RAB11FIP3-207ENST00000461009 RASIP1Q5U651 963 aa15.13■□□□□ 0.01
RAB11FIP3-207ENST00000461009 SESTD1Q86VW0 696 aa15.13■□□□□ 0.01
RAB11FIP3-207ENST00000461009 CAGE1Q8TC20 777 aa15.13■□□□□ 0.01
RAB11FIP3-207ENST00000461009 WNT8AQ9H1J5 351 aa15.13■□□□□ 0.01
RAB11FIP3-207ENST00000461009 ZNF576Q9H609 170 aa15.13■□□□□ 0.01
RAB11FIP3-207ENST00000461009 PCDHA6Q9UN73 950 aa15.13■□□□□ 0.01
RAB11FIP3-207ENST00000461009 PCDHA8Q9Y5H6 950 aa15.13■□□□□ 0.01
RAB11FIP3-207ENST00000461009 NOP56O00567 594 aaKnown RBP15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 PPFIA3O75145 1194 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 PARNO95453 639 aaKnown RBP15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 GGPS1O95749 300 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 FOSL2P15408 326 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 MCM2P49736 904 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 PSEN2P49810 448 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 NLRP5P59047 1200 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 AP3B2Q13367 1082 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 NEDD9Q14511 834 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 MYSM1Q5VVJ2 828 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 PCNX4Q63HM2 1172 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 TYW1BQ6NUM6 668 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 DEFB128Q7Z7B8 93 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 NECAB1Q8N987 351 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 SCLYQ96I15 445 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 FTOQ9C0B1 505 aaKnown RBP eCLIP15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 TTYH1Q9H313 450 aaPredicted RBP15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 FRMPD4Q14CM0 1322 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 STK36Q9NRP7 1315 aa15.12■□□□□ 0.01
RAB11FIP3-207ENST00000461009 SCN10AQ9Y5Y9 1956 aa15.11■□□□□ 0.01
RAB11FIP3-207ENST00000461009 IQCF3P0C7M6 154 aa15.11■□□□□ 0.01
RAB11FIP3-207ENST00000461009 MFSD10Q14728 455 aa15.11■□□□□ 0.01
RAB11FIP3-207ENST00000461009 GALNT17Q6IS24 598 aa15.11■□□□□ 0.01
RAB11FIP3-207ENST00000461009 NLRX1Q86UT6 975 aa15.11■□□□□ 0.01
RAB11FIP3-207ENST00000461009 AFAP1L1Q8TED9 768 aa15.11■□□□□ 0.01
RAB11FIP3-207ENST00000461009 ALG1Q9BT22 464 aa15.11■□□□□ 0.01
RAB11FIP3-207ENST00000461009 PBX4Q9BYU1 374 aa15.11■□□□□ 0.01
RAB11FIP3-207ENST00000461009 VPS54Q9P1Q0 977 aa15.11■□□□□ 0.01
RAB11FIP3-207ENST00000461009 ORC3Q9UBD5 711 aaPredicted RBP15.11■□□□□ 0.01
RAB11FIP3-207ENST00000461009 MYH7BA7E2Y1 1941 aa15.11■□□□□ 0.01
RAB11FIP3-207ENST00000461009 FIBPO43427 364 aa15.1■□□□□ 0.01
RAB11FIP3-207ENST00000461009 CLK2P49760 499 aaKnown RBP15.1■□□□□ 0.01
RAB11FIP3-207ENST00000461009 KIAA0753Q2KHM9 967 aa15.1■□□□□ 0.01
RAB11FIP3-207ENST00000461009 REXO1Q8N1G1 1221 aaKnown RBP15.1■□□□□ 0.01
RAB11FIP3-207ENST00000461009 GIMAP8Q8ND71 665 aaPredicted RBP15.1■□□□□ 0.01
RAB11FIP3-207ENST00000461009 MAFAQ8NHW3 353 aaPredicted RBP15.1■□□□□ 0.01
RAB11FIP3-207ENST00000461009 MYLIPQ8WY64 445 aa15.1■□□□□ 0.01
RAB11FIP3-207ENST00000461009 KAT2BQ92831 832 aa15.1■□□□□ 0.01
RAB11FIP3-207ENST00000461009 CDHR1Q96JP9 859 aa15.1■□□□□ 0.01
RAB11FIP3-207ENST00000461009 GAS2L1Q99501 681 aaPredicted RBP15.1■□□□□ 0.01
RAB11FIP3-207ENST00000461009 LLPHQ9BRT6 129 aaKnown RBP15.1■□□□□ 0.01
RAB11FIP3-207ENST00000461009 SLC28A3Q9HAS3 691 aa15.1■□□□□ 0.01
RAB11FIP3-207ENST00000461009 GTF2IRD1Q9UHL9 959 aa15.1■□□□□ 0.01
RAB11FIP3-207ENST00000461009 GRXCR1A8MXD5 290 aa15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 MAFGO15525 162 aa15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 RGS20O76081 388 aa15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 LARGE1O95461 756 aa15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 CTDNEP1O95476 244 aa15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 F2P00734 622 aa15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 ZNF286BP0CG31 522 aa15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 ATP2A2P16615 1042 aaKnown RBP15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 UBA1P22314 1058 aaKnown RBP15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 ICAM3P32942 547 aa15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 MRPS9P82933 396 aaKnown RBP15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 JAKMIP3Q5VZ66 844 aa15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 GDF6Q6KF10 455 aaPredicted RBP15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 IL31RAQ8NI17 732 aa15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 PPP1R13LQ8WUF5 828 aa15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 ANO3Q9BYT9 981 aa15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 RTEL1Q9NZ71 1219 aa15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 CXXC1Q9P0U4 656 aaPredicted RBP15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 HDAC6Q9UBN7 1215 aa15.09■□□□□ 0.01
RAB11FIP3-207ENST00000461009 SPATA31C2B4DYI2 1134 aa15.08■□□□□ 0
RAB11FIP3-207ENST00000461009 KIF28PB7ZC32 967 aa15.08■□□□□ 0
RAB11FIP3-207ENST00000461009 DLL1O00548 723 aa15.08■□□□□ 0
RAB11FIP3-207ENST00000461009 SORBS3O60504 671 aa15.08■□□□□ 0
RAB11FIP3-207ENST00000461009 GNAT1P11488 350 aa15.08■□□□□ 0
RAB11FIP3-207ENST00000461009 HOXD8P13378 290 aaPredicted RBP15.08■□□□□ 0
RAB11FIP3-207ENST00000461009 SELPP16109 830 aa15.08■□□□□ 0
RAB11FIP3-207ENST00000461009 ZNF76P36508 570 aa15.08■□□□□ 0
RAB11FIP3-207ENST00000461009 PBX2P40425 430 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms