RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 TDRD3Q9H7E2 651 aaKnown RBP6.74□□□□□ -1.33
PTPN12-209ENST00000460731 DCP1AQ9NPI6 582 aaPredicted RBP6.74□□□□□ -1.33
PTPN12-209ENST00000460731 DDX4Q9NQI0 724 aaKnown RBP6.74□□□□□ -1.33
PTPN12-209ENST00000460731 USP40Q9NVE5 1235 aa6.74□□□□□ -1.33
PTPN12-209ENST00000460731 AATFQ9NY61 560 aaKnown RBP eCLIP6.74□□□□□ -1.33
PTPN12-209ENST00000460731 PPP2R3BQ9Y5P8 575 aa6.74□□□□□ -1.33
PTPN12-209ENST00000460731 AK9Q5TCS8 1911 aa6.74□□□□□ -1.33
PTPN12-209ENST00000460731 ASTN2O75129 1339 aaPredicted RBP6.74□□□□□ -1.33
PTPN12-209ENST00000460731 ECM29Q5VYK3 1845 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 MYO1BO43795 1136 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 MBD4O95243 580 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 HSPD1P10809 573 aaKnown RBP6.73□□□□□ -1.33
PTPN12-209ENST00000460731 ESRRAP11474 423 aaPredicted RBP6.73□□□□□ -1.33
PTPN12-209ENST00000460731 YY1P25490 414 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 MFAP1P55081 439 aaKnown RBP6.73□□□□□ -1.33
PTPN12-209ENST00000460731 ZNF124Q15973 351 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 C8orf34Q49A92 452 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 CWC27Q6UX04 472 aaKnown RBP6.73□□□□□ -1.33
PTPN12-209ENST00000460731 SEZ6L2Q6UXD5 910 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 CDC37L1Q7L3B6 337 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 APOBEC3FQ8IUX4 373 aaKnown RBP6.73□□□□□ -1.33
PTPN12-209ENST00000460731 ZFPM1Q8IX07 1006 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 MIGA1Q8NAN2 632 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 OSMRQ99650 979 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 CRNKL1Q9BZJ0 848 aaKnown RBP6.73□□□□□ -1.33
PTPN12-209ENST00000460731 DEFB129Q9H1M3 183 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 DHX36Q9H2U1 1008 aaKnown RBP6.73□□□□□ -1.33
PTPN12-209ENST00000460731 DIAPH3Q9NSV4 1193 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 ANAPC4Q9UJX5 808 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 FOCADQ5VW36 1801 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 CCDC171Q6TFL3 1326 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 CDK5RAP2Q96SN8 1893 aa6.73□□□□□ -1.33
PTPN12-209ENST00000460731 UNCXA6NJT0 531 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 PRKAB2O43741 272 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 TOMM70O94826 608 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 FGAP02671 866 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 ADH5P11766 374 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 NT5C2P49902 561 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 CYP27A1Q02318 531 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 GABPAQ06546 454 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 TNFAIP1Q13829 316 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 RASA3Q14644 834 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 NECTIN1Q15223 517 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 MAP3K11Q16584 847 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 ZNF792Q3KQV3 632 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 C12orf60Q5U649 245 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 VPS53Q5VIR6 699 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 ANGEL2Q5VTE6 544 aaKnown RBP6.72□□□□□ -1.33
PTPN12-209ENST00000460731 CTR9Q6PD62 1173 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 ZNF765Q7L2R6 523 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 SPRED2Q7Z698 418 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 FOXP4Q8IVH2 680 aaPredicted RBP6.72□□□□□ -1.33
PTPN12-209ENST00000460731 TEX11Q8IYF3 940 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 IFNL3Q8IZI9 196 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 YIPF2Q9BWQ6 316 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 LSG1Q9H089 658 aaKnown RBP6.72□□□□□ -1.33
PTPN12-209ENST00000460731 OSBPL5Q9H0X9 879 aaPredicted RBP6.72□□□□□ -1.33
PTPN12-209ENST00000460731 EHD4Q9H223 541 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 ARMT1Q9H993 441 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 EPB41L4AQ9HCS5 686 aaPredicted RBP6.72□□□□□ -1.33
PTPN12-209ENST00000460731 GGA3Q9NZ52 723 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 ZNF112Q9UJU3 913 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 ACTL7BQ9Y614 415 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 FLT1P17948 1338 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 PASKQ96RG2 1323 aa6.72□□□□□ -1.33
PTPN12-209ENST00000460731 DDTLA6NHG4 134 aaPredicted RBP6.71□□□□□ -1.34
PTPN12-209ENST00000460731 EIF5BO60841 1220 aaKnown RBP6.71□□□□□ -1.34
PTPN12-209ENST00000460731 RBM5P52756 815 aaKnown RBP eCLIP6.71□□□□□ -1.34
PTPN12-209ENST00000460731 PTH1RQ03431 593 aa6.71□□□□□ -1.34
PTPN12-209ENST00000460731 FSTL1Q12841 308 aa6.71□□□□□ -1.34
PTPN12-209ENST00000460731 TATDN1Q6P1N9 297 aa6.71□□□□□ -1.34
PTPN12-209ENST00000460731 KRT26Q7Z3Y9 468 aa6.71□□□□□ -1.34
PTPN12-209ENST00000460731 TGFBRAP1Q8WUH2 860 aa6.71□□□□□ -1.34
PTPN12-209ENST00000460731 CLP1Q92989 425 aaKnown RBP6.71□□□□□ -1.34
PTPN12-209ENST00000460731 DCPSQ96C86 337 aaKnown RBP6.71□□□□□ -1.34
PTPN12-209ENST00000460731 NOL10Q9BSC4 688 aaKnown RBP6.71□□□□□ -1.34
PTPN12-209ENST00000460731 SEMA6CQ9H3T2 930 aa6.71□□□□□ -1.34
PTPN12-209ENST00000460731 GSX1Q9H4S2 264 aaPredicted RBP6.71□□□□□ -1.34
PTPN12-209ENST00000460731 PI4KBQ9UBF8 816 aa6.71□□□□□ -1.34
PTPN12-209ENST00000460731 SLC5A6Q9Y289 635 aa6.71□□□□□ -1.34
PTPN12-209ENST00000460731 SLC4A4Q9Y6R1 1079 aa6.71□□□□□ -1.34
PTPN12-209ENST00000460731 ROBO3Q96MS0 1386 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 DDX60LQ5H9U9 1706 aaKnown RBP6.7□□□□□ -1.34
PTPN12-209ENST00000460731 CLRN2A0PK11 232 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 BIN1O00499 593 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 EIF4EBP3O60516 100 aaPredicted RBP6.7□□□□□ -1.34
PTPN12-209ENST00000460731 NFICP08651 508 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 PCP11498 1178 aaKnown RBP6.7□□□□□ -1.34
PTPN12-209ENST00000460731 NOVP48745 357 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 TNNI2P48788 182 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 PLCD1P51178 756 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 CACNB3P54284 484 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 FKBP1BP68106 108 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 MAP7Q14244 749 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 SUPT20HL1Q3ZLR7 823 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 LDLRAD1Q5T700 205 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 CST9Q5W186 159 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 CASC1Q6TDU7 716 aa6.7□□□□□ -1.34
PTPN12-209ENST00000460731 ZNF574Q6ZN55 896 aaPredicted RBP6.7□□□□□ -1.34
PTPN12-209ENST00000460731 CCDC129Q6ZRS4 1044 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms