RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 SPDYE3A6NKU9 549 aa18.87■□□□□ 0.61
YIPF3-205ENST00000460547 ASNSP08243 561 aa18.87■□□□□ 0.61
YIPF3-205ENST00000460547 PTPRAP18433 802 aa18.87■□□□□ 0.61
YIPF3-205ENST00000460547 CCNE1P24864 410 aa18.87■□□□□ 0.61
YIPF3-205ENST00000460547 COPB1P53618 953 aaKnown RBP18.87■□□□□ 0.61
YIPF3-205ENST00000460547 IRF2BP1Q8IU81 584 aa18.87■□□□□ 0.61
YIPF3-205ENST00000460547 SPICE1Q8N0Z3 855 aa18.87■□□□□ 0.61
YIPF3-205ENST00000460547 ETNPPLQ8TBG4 499 aa18.87■□□□□ 0.61
YIPF3-205ENST00000460547 PPP1R13BQ96KQ4 1090 aa18.87■□□□□ 0.61
YIPF3-205ENST00000460547 GINM1Q9NU53 330 aa18.87■□□□□ 0.61
YIPF3-205ENST00000460547 OTOFQ9HC10 1997 aa18.87■□□□□ 0.61
YIPF3-205ENST00000460547 MYMKA6NI61 221 aa18.86■□□□□ 0.61
YIPF3-205ENST00000460547 GPR25O00155 361 aa18.86■□□□□ 0.61
YIPF3-205ENST00000460547 CXCL11O14625 94 aa18.86■□□□□ 0.61
YIPF3-205ENST00000460547 MARCH6O60337 910 aa18.86■□□□□ 0.61
YIPF3-205ENST00000460547 CYP3A4P08684 503 aa18.86■□□□□ 0.61
YIPF3-205ENST00000460547 SNAP25P60880 206 aa18.86■□□□□ 0.61
YIPF3-205ENST00000460547 MCM6Q14566 821 aa18.86■□□□□ 0.61
YIPF3-205ENST00000460547 USH1GQ495M9 461 aa18.86■□□□□ 0.61
YIPF3-205ENST00000460547 FAM83BQ5T0W9 1011 aa18.86■□□□□ 0.61
YIPF3-205ENST00000460547 CEP135Q66GS9 1140 aa18.86■□□□□ 0.61
YIPF3-205ENST00000460547 FOXR2Q6PJQ5 311 aa18.86■□□□□ 0.61
YIPF3-205ENST00000460547 P2RX5Q93086 422 aa18.86■□□□□ 0.61
YIPF3-205ENST00000460547 BAG1Q99933 345 aaPredicted RBP18.86■□□□□ 0.61
YIPF3-205ENST00000460547 NUDT12Q9BQG2 462 aa18.86■□□□□ 0.61
YIPF3-205ENST00000460547 MAPK8IP1Q9UQF2 711 aa18.86■□□□□ 0.61
YIPF3-205ENST00000460547 AKR1B15C9JRZ8 316 aaPredicted RBP18.85■□□□□ 0.61
YIPF3-205ENST00000460547 PMS1P54277 932 aaKnown RBP18.85■□□□□ 0.61
YIPF3-205ENST00000460547 STK4Q13043 487 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 TRIM14Q14142 442 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 PTPN21Q16825 1174 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 LENG9Q96B70 501 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 CCDC51Q96ER9 411 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 TRIM47Q96LD4 638 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 FAM20AQ96MK3 541 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 KCNH4Q9UQ05 1017 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 STK24Q9Y6E0 443 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 TRIM49BA6NDI0 452 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 N4BP3O15049 544 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 FECHP22830 423 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 EHHADHQ08426 723 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 TAF1CQ15572 869 aaPredicted RBP18.85■□□□□ 0.61
YIPF3-205ENST00000460547 KCNK18Q7Z418 384 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 PPFIBP1Q86W92 1011 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 KIAA0895Q8NCT3 520 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 ZNF296Q8WUU4 475 aaPredicted RBP18.85■□□□□ 0.61
YIPF3-205ENST00000460547 DUSP9Q99956 384 aaKnown RBP18.85■□□□□ 0.61
YIPF3-205ENST00000460547 ZFYVE28Q9HCC9 887 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 TRMT1Q9NXH9 659 aaKnown RBP18.85■□□□□ 0.61
YIPF3-205ENST00000460547 FEM1BQ9UK73 627 aa18.85■□□□□ 0.61
YIPF3-205ENST00000460547 LGALS16A8MUM7 142 aa18.84■□□□□ 0.61
YIPF3-205ENST00000460547 SPIRE1Q08AE8 756 aa18.84■□□□□ 0.61
YIPF3-205ENST00000460547 PSMD2Q13200 908 aa18.84■□□□□ 0.61
YIPF3-205ENST00000460547 NAA15Q9BXJ9 866 aaKnown RBP18.84■□□□□ 0.61
YIPF3-205ENST00000460547 R3HDMLQ9H3Y0 253 aa18.84■□□□□ 0.61
YIPF3-205ENST00000460547 TAB2Q9NYJ8 693 aa18.84■□□□□ 0.61
YIPF3-205ENST00000460547 AFG3L2Q9Y4W6 797 aa18.84■□□□□ 0.61
YIPF3-205ENST00000460547 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.84■□□□□ 0.61
YIPF3-205ENST00000460547 BTBD19C9JJ37 291 aa18.83■□□□□ 0.61
YIPF3-205ENST00000460547 RIOK3O14730 519 aaKnown RBP18.83■□□□□ 0.61
YIPF3-205ENST00000460547 FKTNO75072 461 aa18.83■□□□□ 0.61
YIPF3-205ENST00000460547 MFAP3LO75121 409 aa18.83■□□□□ 0.61
YIPF3-205ENST00000460547 COBLO75128 1261 aa18.83■□□□□ 0.61
YIPF3-205ENST00000460547 CCT6AP40227 531 aaKnown RBP18.83■□□□□ 0.61
YIPF3-205ENST00000460547 GOLGA8FQ08AF8 430 aa18.83■□□□□ 0.61
YIPF3-205ENST00000460547 GOLGA8DPQ0D2H9 430 aa18.83■□□□□ 0.61
YIPF3-205ENST00000460547 CRHR2Q13324 411 aa18.83■□□□□ 0.61
YIPF3-205ENST00000460547 HAUS3Q68CZ6 603 aa18.83■□□□□ 0.61
YIPF3-205ENST00000460547 CNGA4Q8IV77 575 aa18.83■□□□□ 0.61
YIPF3-205ENST00000460547 FAM114A1Q8IWE2 563 aa18.83■□□□□ 0.61
YIPF3-205ENST00000460547 GUF1Q8N442 669 aaKnown RBP18.83■□□□□ 0.61
YIPF3-205ENST00000460547 A0A1W2PQC6 194 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 ZSCAN12O43309 604 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 FCER1AP12319 257 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 ADKP55263 362 aaKnown RBP18.82■□□□□ 0.6
YIPF3-205ENST00000460547 DGKZQ13574 1117 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 ECM1Q16610 540 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 CENPPQ6IPU0 288 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 FASTKD5Q7L8L6 764 aaKnown RBP18.82■□□□□ 0.6
YIPF3-205ENST00000460547 CSGALNACT2Q8N6G5 542 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 ZCCHC17Q9NP64 241 aaKnown RBP18.82■□□□□ 0.6
YIPF3-205ENST00000460547 MRPL11Q9Y3B7 192 aaKnown RBP18.82■□□□□ 0.6
YIPF3-205ENST00000460547 ABCB11O95342 1321 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 GOLGA6L9A6NEM1 432 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 GYPCP04921 128 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 TPM1P09493 284 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 RBL2Q08999 1139 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 PRR16Q569H4 304 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 KCTD17Q8N5Z5 321 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 DDX12PQ92771 950 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 DNAJC19Q96DA6 116 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 SRRTQ9BXP5 876 aaKnown RBP18.82■□□□□ 0.6
YIPF3-205ENST00000460547 VPS16Q9H269 839 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 AS3MTQ9HBK9 375 aa18.82■□□□□ 0.6
YIPF3-205ENST00000460547 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.82■□□□□ 0.6
YIPF3-205ENST00000460547 MAGEC2Q9UBF1 373 aaPredicted RBP18.82■□□□□ 0.6
YIPF3-205ENST00000460547 ATAD5Q96QE3 1844 aa18.81■□□□□ 0.6
YIPF3-205ENST00000460547 FAM86B1E9PN63 330 aa18.81■□□□□ 0.6
YIPF3-205ENST00000460547 FAM86B2P0C5J1 330 aa18.81■□□□□ 0.6
YIPF3-205ENST00000460547 ANKRD23Q86SG2 305 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms