RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 RNASE1P07998 156 aaKnown RBP7.47□□□□□ -1.21
CCDC50-203ENST00000460064 ZBTB48P10074 688 aaPredicted RBP7.47□□□□□ -1.21
CCDC50-203ENST00000460064 ARL4AP40617 200 aa7.47□□□□□ -1.21
CCDC50-203ENST00000460064 GALK1P51570 392 aa7.47□□□□□ -1.21
CCDC50-203ENST00000460064 SNX17Q15036 470 aa7.47□□□□□ -1.21
CCDC50-203ENST00000460064 TIGD5Q53EQ6 642 aa7.47□□□□□ -1.21
CCDC50-203ENST00000460064 HABP4Q5JVS0 413 aaKnown RBP7.47□□□□□ -1.21
CCDC50-203ENST00000460064 STEAP3Q658P3 488 aa7.47□□□□□ -1.21
CCDC50-203ENST00000460064 IQSEC1Q6DN90 963 aa7.47□□□□□ -1.21
CCDC50-203ENST00000460064 LILRA2Q8N149 483 aa7.47□□□□□ -1.21
CCDC50-203ENST00000460064 PUS7LQ9H0K6 701 aaKnown RBP7.47□□□□□ -1.21
CCDC50-203ENST00000460064 EMC7Q9NPA0 242 aa7.47□□□□□ -1.21
CCDC50-203ENST00000460064 OXSMQ9NWU1 459 aa7.47□□□□□ -1.21
CCDC50-203ENST00000460064 H2AFY2Q9P0M6 372 aaPredicted RBP7.47□□□□□ -1.21
CCDC50-203ENST00000460064 HGSO14964 777 aaPredicted RBP7.46□□□□□ -1.22
CCDC50-203ENST00000460064 EFEMP2O95967 443 aa7.46□□□□□ -1.22
CCDC50-203ENST00000460064 IRF9Q00978 393 aa7.46□□□□□ -1.22
CCDC50-203ENST00000460064 ZNF174Q15697 407 aa7.46□□□□□ -1.22
CCDC50-203ENST00000460064 CHRNA2Q15822 529 aa7.46□□□□□ -1.22
CCDC50-203ENST00000460064 ODR4Q5SWX8 454 aa7.46□□□□□ -1.22
CCDC50-203ENST00000460064 HHIPL2Q6UWX4 724 aa7.46□□□□□ -1.22
CCDC50-203ENST00000460064 NLRX1Q86UT6 975 aa7.46□□□□□ -1.22
CCDC50-203ENST00000460064 NLGN4XQ8N0W4 816 aa7.46□□□□□ -1.22
CCDC50-203ENST00000460064 SH3RF2Q8TEC5 729 aa7.46□□□□□ -1.22
CCDC50-203ENST00000460064 COG1Q8WTW3 980 aa7.46□□□□□ -1.22
CCDC50-203ENST00000460064 NUB1Q9Y5A7 615 aa7.46□□□□□ -1.22
CCDC50-203ENST00000460064 MAN2B1O00754 1011 aa7.45□□□□□ -1.22
CCDC50-203ENST00000460064 SCDO00767 359 aa7.45□□□□□ -1.22
CCDC50-203ENST00000460064 SLC27A2O14975 620 aa7.45□□□□□ -1.22
CCDC50-203ENST00000460064 GLI4P10075 376 aa7.45□□□□□ -1.22
CCDC50-203ENST00000460064 PNLIPP16233 465 aa7.45□□□□□ -1.22
CCDC50-203ENST00000460064 MTMR1Q13613 665 aa7.45□□□□□ -1.22
CCDC50-203ENST00000460064 ZNF792Q3KQV3 632 aa7.45□□□□□ -1.22
CCDC50-203ENST00000460064 PASD1Q8IV76 773 aa7.45□□□□□ -1.22
CCDC50-203ENST00000460064 RBM12BQ8IXT5 1001 aaKnown RBP7.45□□□□□ -1.22
CCDC50-203ENST00000460064 CD244Q9BZW8 370 aa7.45□□□□□ -1.22
CCDC50-203ENST00000460064 CCDC8Q9H0W5 538 aaPredicted RBP7.45□□□□□ -1.22
CCDC50-203ENST00000460064 SMOC1Q9H4F8 434 aa7.45□□□□□ -1.22
CCDC50-203ENST00000460064 CRTAC1Q9NQ79 661 aa7.45□□□□□ -1.22
CCDC50-203ENST00000460064 SRPK3Q9UPE1 567 aa7.45□□□□□ -1.22
CCDC50-203ENST00000460064 CTNND2Q9UQB3 1225 aa7.45□□□□□ -1.22
CCDC50-203ENST00000460064 HIP1RO75146 1068 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 ULK1O75385 1050 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 TADA3O75528 432 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 ALDH1L1O75891 902 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 YBX3P16989 372 aaKnown RBP eCLIP7.44□□□□□ -1.22
CCDC50-203ENST00000460064 SLC9A1P19634 815 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 CPZQ66K79 652 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 HDGFL2Q7Z4V5 671 aaPredicted RBP7.44□□□□□ -1.22
CCDC50-203ENST00000460064 DCP2Q8IU60 420 aaKnown RBP7.44□□□□□ -1.22
CCDC50-203ENST00000460064 CNTD1Q8N815 330 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 UHMK1Q8TAS1 419 aaKnown RBP7.44□□□□□ -1.22
CCDC50-203ENST00000460064 ABHD4Q8TB40 342 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 JDP2Q8WYK2 163 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 SHISA4Q96DD7 197 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 MTMR8Q96EF0 704 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 SCYL1Q96KG9 808 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 AP5M1Q9H0R1 490 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 RC3H2Q9HBD1 1191 aaKnown RBP7.44□□□□□ -1.22
CCDC50-203ENST00000460064 RXFP1Q9HBX9 757 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 DBR1Q9UK59 544 aaKnown RBP7.44□□□□□ -1.22
CCDC50-203ENST00000460064 SIT1Q9Y3P8 196 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 ATP23Q9Y6H3 246 aa7.44□□□□□ -1.22
CCDC50-203ENST00000460064 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.43□□□□□ -1.22
CCDC50-203ENST00000460064 ZC3H12DA2A288 527 aaKnown RBP7.43□□□□□ -1.22
CCDC50-203ENST00000460064 F8W031 263 aaPredicted RBP7.43□□□□□ -1.22
CCDC50-203ENST00000460064 SLC6A11P48066 632 aa7.43□□□□□ -1.22
CCDC50-203ENST00000460064 KIF11P52732 1056 aa7.43□□□□□ -1.22
CCDC50-203ENST00000460064 FAPQ12884 760 aa7.43□□□□□ -1.22
CCDC50-203ENST00000460064 EMC4Q5J8M3 183 aa7.43□□□□□ -1.22
CCDC50-203ENST00000460064 CREB3L3Q68CJ9 461 aa7.43□□□□□ -1.22
CCDC50-203ENST00000460064 KCTD1Q719H9 257 aa7.43□□□□□ -1.22
CCDC50-203ENST00000460064 MILR1Q7Z6M3 343 aa7.43□□□□□ -1.22
CCDC50-203ENST00000460064 EFHBQ8N7U6 833 aa7.43□□□□□ -1.22
CCDC50-203ENST00000460064 KIAA1958Q8N8K9 716 aa7.43□□□□□ -1.22
CCDC50-203ENST00000460064 NETO2Q8NC67 525 aa7.43□□□□□ -1.22
CCDC50-203ENST00000460064 SEC14L1Q92503 715 aa7.43□□□□□ -1.22
CCDC50-203ENST00000460064 TRIM8Q9BZR9 551 aa7.43□□□□□ -1.22
CCDC50-203ENST00000460064 PCIF1Q9H4Z3 704 aa7.43□□□□□ -1.22
CCDC50-203ENST00000460064 NUDT5Q9UKK9 219 aa7.43□□□□□ -1.22
CCDC50-203ENST00000460064 SPO11Q9Y5K1 396 aa7.43□□□□□ -1.22
CCDC50-203ENST00000460064 DVL2O14641 736 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 SGSM2O43147 1006 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 ADAM23O75077 832 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 CLASP2O75122 1294 aaKnown RBP7.42□□□□□ -1.22
CCDC50-203ENST00000460064 PRKD3O94806 890 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 PARNO95453 639 aaKnown RBP7.42□□□□□ -1.22
CCDC50-203ENST00000460064 LTFP02788 710 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 DBHP09172 617 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 AFMP43652 599 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 TMEM132BQ14DG7 1078 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 DDB1Q16531 1140 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 FIGNQ5HY92 759 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 ZMYM1Q5SVZ6 1142 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 BROXQ5VW32 411 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 CYP4F22Q6NT55 531 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 NOSTRINQ8IVI9 506 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 TRIM48Q8IWZ4 208 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 SLC5A5Q92911 643 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 ELF4Q99607 663 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms