RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-209ENST00000459963 PLEKHG4Q58EX7 1191 aa9.73□□□□□ -0.85
NCSTN-209ENST00000459963 ANKRD54Q6NXT1 300 aa9.73□□□□□ -0.85
NCSTN-209ENST00000459963 CLEC10AQ8IUN9 316 aa9.73□□□□□ -0.85
NCSTN-209ENST00000459963 ZDHHC14Q8IZN3 488 aa9.73□□□□□ -0.85
NCSTN-209ENST00000459963 SLF1Q9BQI6 1058 aa9.73□□□□□ -0.85
NCSTN-209ENST00000459963 APOL5Q9BWW9 433 aa9.73□□□□□ -0.85
NCSTN-209ENST00000459963 SMG5Q9UPR3 1016 aaKnown RBP9.73□□□□□ -0.85
NCSTN-209ENST00000459963 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.73□□□□□ -0.85
NCSTN-209ENST00000459963 ADGRA3Q8IWK6 1321 aa9.73□□□□□ -0.85
NCSTN-209ENST00000459963 BPTFQ12830 3046 aa9.72□□□□□ -0.85
NCSTN-209ENST00000459963 NBEAQ8NFP9 2946 aa9.72□□□□□ -0.85
NCSTN-209ENST00000459963 ITGB1P05556 798 aa9.72□□□□□ -0.85
NCSTN-209ENST00000459963 SRGAP2BP0DMP2 458 aa9.72□□□□□ -0.85
NCSTN-209ENST00000459963 TECP42680 631 aa9.72□□□□□ -0.85
NCSTN-209ENST00000459963 DUSP6Q16828 381 aa9.72□□□□□ -0.85
NCSTN-209ENST00000459963 TRIM71Q2Q1W2 868 aaKnown RBP9.72□□□□□ -0.85
NCSTN-209ENST00000459963 NAALADL2Q58DX5 795 aa9.72□□□□□ -0.85
NCSTN-209ENST00000459963 FAM83BQ5T0W9 1011 aa9.72□□□□□ -0.85
NCSTN-209ENST00000459963 SYCE2Q6PIF2 218 aa9.72□□□□□ -0.85
NCSTN-209ENST00000459963 TMEM184AQ6ZMB5 413 aa9.72□□□□□ -0.85
NCSTN-209ENST00000459963 POF1BQ8WVV4 589 aa9.72□□□□□ -0.85
NCSTN-209ENST00000459963 CDCA3Q99618 268 aaPredicted RBP9.72□□□□□ -0.85
NCSTN-209ENST00000459963 WDR11Q9BZH6 1224 aa9.72□□□□□ -0.85
NCSTN-209ENST00000459963 POMKQ9H5K3 350 aa9.72□□□□□ -0.85
NCSTN-209ENST00000459963 RAVER2Q9HCJ3 691 aaKnown RBP9.72□□□□□ -0.85
NCSTN-209ENST00000459963 RAD50Q92878 1312 aa9.72□□□□□ -0.85
NCSTN-209ENST00000459963 A6NJR5 290 aa9.71□□□□□ -0.86
NCSTN-209ENST00000459963 PTK7Q13308 1070 aa9.71□□□□□ -0.86
NCSTN-209ENST00000459963 WDR43Q15061 677 aaKnown RBP eCLIP9.71□□□□□ -0.86
NCSTN-209ENST00000459963 ZNF528Q3MIS6 628 aa9.71□□□□□ -0.86
NCSTN-209ENST00000459963 SPECC1Q5M775 1068 aa9.71□□□□□ -0.86
NCSTN-209ENST00000459963 NYAP1Q6ZVC0 841 aa9.71□□□□□ -0.86
NCSTN-209ENST00000459963 TDRD5Q8NAT2 981 aaKnown RBP9.71□□□□□ -0.86
NCSTN-209ENST00000459963 ADAM32Q8TC27 787 aa9.71□□□□□ -0.86
NCSTN-209ENST00000459963 SEPT8Q92599 483 aa9.71□□□□□ -0.86
NCSTN-209ENST00000459963 NECTIN4Q96NY8 510 aa9.71□□□□□ -0.86
NCSTN-209ENST00000459963 HNRNPABQ99729 332 aaKnown RBP9.71□□□□□ -0.86
NCSTN-209ENST00000459963 EPC1Q9H2F5 836 aa9.71□□□□□ -0.86
NCSTN-209ENST00000459963 RC3H2Q9HBD1 1191 aaKnown RBP9.71□□□□□ -0.86
NCSTN-209ENST00000459963 CDH22Q9UJ99 828 aa9.71□□□□□ -0.86
NCSTN-209ENST00000459963 GMEB2Q9UKD1 530 aa9.71□□□□□ -0.86
NCSTN-209ENST00000459963 DUSP12Q9UNI6 340 aa9.71□□□□□ -0.86
NCSTN-209ENST00000459963 COG6Q9Y2V7 657 aa9.71□□□□□ -0.86
NCSTN-209ENST00000459963 APAF1O14727 1248 aa9.7□□□□□ -0.86
NCSTN-209ENST00000459963 ZBED4O75132 1171 aa9.7□□□□□ -0.86
NCSTN-209ENST00000459963 DCNP07585 359 aaKnown RBP9.7□□□□□ -0.86
NCSTN-209ENST00000459963 MMP3P08254 477 aa9.7□□□□□ -0.86
NCSTN-209ENST00000459963 HOXB8P17481 243 aaPredicted RBP9.7□□□□□ -0.86
NCSTN-209ENST00000459963 RFX1P22670 979 aa9.7□□□□□ -0.86
NCSTN-209ENST00000459963 ARID4AP29374 1257 aaPredicted RBP9.7□□□□□ -0.86
NCSTN-209ENST00000459963 TDGQ13569 410 aa9.7□□□□□ -0.86
NCSTN-209ENST00000459963 KCNC3Q14003 757 aa9.7□□□□□ -0.86
NCSTN-209ENST00000459963 BTG3Q14201 252 aaPredicted RBP9.7□□□□□ -0.86
NCSTN-209ENST00000459963 MAML2Q8IZL2 1156 aaPredicted RBP9.7□□□□□ -0.86
NCSTN-209ENST00000459963 KLHL23Q8NBE8 558 aa9.7□□□□□ -0.86
NCSTN-209ENST00000459963 ATRIPQ8WXE1 791 aa9.7□□□□□ -0.86
NCSTN-209ENST00000459963 WNT8BQ93098 351 aa9.7□□□□□ -0.86
NCSTN-209ENST00000459963 GOPCQ9HD26 462 aa9.7□□□□□ -0.86
NCSTN-209ENST00000459963 A1CFQ9NQ94 594 aaKnown RBP9.7□□□□□ -0.86
NCSTN-209ENST00000459963 HOMER2Q9NSB8 354 aa9.7□□□□□ -0.86
NCSTN-209ENST00000459963 DLGAP2Q9P1A6 1054 aa9.7□□□□□ -0.86
NCSTN-209ENST00000459963 GTF2IRD1Q9UHL9 959 aa9.7□□□□□ -0.86
NCSTN-209ENST00000459963 CTDP1Q9Y5B0 961 aaPredicted RBP9.7□□□□□ -0.86
NCSTN-209ENST00000459963 PCDHGA2Q9Y5H1 932 aa9.7□□□□□ -0.86
NCSTN-209ENST00000459963 RSPH10B2B2RC85 870 aa9.69□□□□□ -0.86
NCSTN-209ENST00000459963 SMAPO00193 183 aa9.69□□□□□ -0.86
NCSTN-209ENST00000459963 RAD21O60216 631 aa9.69□□□□□ -0.86
NCSTN-209ENST00000459963 POLR3DP05423 398 aaPredicted RBP9.69□□□□□ -0.86
NCSTN-209ENST00000459963 RSPH10BP0C881 870 aa9.69□□□□□ -0.86
NCSTN-209ENST00000459963 MLLT3P42568 568 aaPredicted RBP9.69□□□□□ -0.86
NCSTN-209ENST00000459963 SPEM2Q0P670 501 aa9.69□□□□□ -0.86
NCSTN-209ENST00000459963 PRPF38AQ8NAV1 312 aaKnown RBP9.69□□□□□ -0.86
NCSTN-209ENST00000459963 MICAL1Q8TDZ2 1067 aa9.69□□□□□ -0.86
NCSTN-209ENST00000459963 MORC4Q8TE76 937 aa9.69□□□□□ -0.86
NCSTN-209ENST00000459963 ACAD9Q9H845 621 aa9.69□□□□□ -0.86
NCSTN-209ENST00000459963 RBM47A0AV96 593 aaKnown RBP9.68□□□□□ -0.86
NCSTN-209ENST00000459963 KRBA1A5PL33 1030 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 TBC1D4O60343 1298 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 RNF40O75150 1001 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 VAMP4O75379 141 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 EEF2P13639 858 aaKnown RBP9.68□□□□□ -0.86
NCSTN-209ENST00000459963 AKR1B1P15121 316 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 OAZ1P54368 228 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 IL31Q6EBC2 164 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 CES5AQ6NT32 575 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 CERS3Q8IU89 383 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 TATDN2Q93075 761 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 ZNF689Q96CS4 500 aaPredicted RBP9.68□□□□□ -0.86
NCSTN-209ENST00000459963 TBC1D17Q9HA65 648 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 SLC38A10Q9HBR0 1119 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 HDAC6Q9UBN7 1215 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 WNT16Q9UBV4 365 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 TSR3Q9UJK0 312 aaKnown RBP9.68□□□□□ -0.86
NCSTN-209ENST00000459963 USTQ9Y2C2 406 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 AKAP2Q9Y2D5 859 aa9.68□□□□□ -0.86
NCSTN-209ENST00000459963 HELZ2Q9BYK8 2649 aaKnown RBP9.68□□□□□ -0.86
NCSTN-209ENST00000459963 EIF4E1BA6NMX2 242 aaKnown RBP9.67□□□□□ -0.86
NCSTN-209ENST00000459963 NKRFO15226 690 aaKnown RBP eCLIP9.67□□□□□ -0.86
NCSTN-209ENST00000459963 ITIH3Q06033 890 aa9.67□□□□□ -0.86
NCSTN-209ENST00000459963 PADI6Q6TGC4 694 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms