RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 TGFB3P10600 412 aa14.57□□□□□ -0.08
COL18A1-206ENST00000459895 CAPN2P17655 700 aa14.57□□□□□ -0.08
COL18A1-206ENST00000459895 PURAQ00577 322 aaKnown RBP14.57□□□□□ -0.08
COL18A1-206ENST00000459895 GNL2Q13823 731 aaKnown RBP14.57□□□□□ -0.08
COL18A1-206ENST00000459895 MOXD1Q6UVY6 613 aa14.57□□□□□ -0.08
COL18A1-206ENST00000459895 CXCL17Q6UXB2 119 aa14.57□□□□□ -0.08
COL18A1-206ENST00000459895 NECAB2Q7Z6G3 386 aa14.57□□□□□ -0.08
COL18A1-206ENST00000459895 POTEDQ86YR6 584 aa14.57□□□□□ -0.08
COL18A1-206ENST00000459895 NOSTRINQ8IVI9 506 aa14.57□□□□□ -0.08
COL18A1-206ENST00000459895 SPATA33Q96N06 139 aa14.57□□□□□ -0.08
COL18A1-206ENST00000459895 FOXP1Q9H334 677 aaPredicted RBP14.57□□□□□ -0.08
COL18A1-206ENST00000459895 JPH1Q9HDC5 661 aaPredicted RBP14.57□□□□□ -0.08
COL18A1-206ENST00000459895 H3BQV1 296 aa14.56□□□□□ -0.08
COL18A1-206ENST00000459895 DDX39AO00148 427 aaKnown RBP14.56□□□□□ -0.08
COL18A1-206ENST00000459895 MSH4O15457 936 aa14.56□□□□□ -0.08
COL18A1-206ENST00000459895 MYL3P08590 195 aa14.56□□□□□ -0.08
COL18A1-206ENST00000459895 HOXD8P13378 290 aaPredicted RBP14.56□□□□□ -0.08
COL18A1-206ENST00000459895 USP11P51784 963 aa14.56□□□□□ -0.08
COL18A1-206ENST00000459895 LAMC2Q13753 1193 aa14.56□□□□□ -0.08
COL18A1-206ENST00000459895 NEDD9Q14511 834 aa14.56□□□□□ -0.08
COL18A1-206ENST00000459895 IFFO2Q5TF58 517 aa14.56□□□□□ -0.08
COL18A1-206ENST00000459895 TRIM50Q86XT4 487 aa14.56□□□□□ -0.08
COL18A1-206ENST00000459895 PCSK9Q8NBP7 692 aaKnown RBP14.56□□□□□ -0.08
COL18A1-206ENST00000459895 ETNPPLQ8TBG4 499 aa14.56□□□□□ -0.08
COL18A1-206ENST00000459895 GJA10Q969M2 543 aa14.56□□□□□ -0.08
COL18A1-206ENST00000459895 GPR20Q99678 358 aa14.56□□□□□ -0.08
COL18A1-206ENST00000459895 SENP7Q9BQF6 1050 aa14.56□□□□□ -0.08
COL18A1-206ENST00000459895 ZNF577Q9BSK1 485 aa14.56□□□□□ -0.08
COL18A1-206ENST00000459895 TSEN34Q9BSV6 310 aaKnown RBP14.56□□□□□ -0.08
COL18A1-206ENST00000459895 SENP6Q9GZR1 1112 aaPredicted RBP14.56□□□□□ -0.08
COL18A1-206ENST00000459895 MLXIPQ9HAP2 919 aa14.56□□□□□ -0.08
COL18A1-206ENST00000459895 DDX25Q9UHL0 483 aaKnown RBP14.56□□□□□ -0.08
COL18A1-206ENST00000459895 NFASCO94856 1347 aa14.56□□□□□ -0.08
COL18A1-206ENST00000459895 CYP3A7-CYP3A51PA0A087WV96 503 aa14.55□□□□□ -0.08
COL18A1-206ENST00000459895 IPO5O00410 1097 aaKnown RBP14.55□□□□□ -0.08
COL18A1-206ENST00000459895 NOP56O00567 594 aaKnown RBP14.55□□□□□ -0.08
COL18A1-206ENST00000459895 CCNT1O60563 726 aaKnown RBP14.55□□□□□ -0.08
COL18A1-206ENST00000459895 GCFC2P16383 781 aaKnown RBP14.55□□□□□ -0.08
COL18A1-206ENST00000459895 CYP3A7P24462 503 aa14.55□□□□□ -0.08
COL18A1-206ENST00000459895 U2AF2P26368 475 aaKnown RBP eCLIP14.55□□□□□ -0.08
COL18A1-206ENST00000459895 ATN1P54259 1190 aaPredicted RBP14.55□□□□□ -0.08
COL18A1-206ENST00000459895 PSMC6P62333 389 aa14.55□□□□□ -0.08
COL18A1-206ENST00000459895 NBR1Q14596 966 aa14.55□□□□□ -0.08
COL18A1-206ENST00000459895 LRRC26Q2I0M4 334 aa14.55□□□□□ -0.08
COL18A1-206ENST00000459895 Q4G0T1 1027 aa14.55□□□□□ -0.08
COL18A1-206ENST00000459895 MCTP1Q6DN14 999 aa14.55□□□□□ -0.08
COL18A1-206ENST00000459895 SPRYD3Q8NCJ5 442 aa14.55□□□□□ -0.08
COL18A1-206ENST00000459895 PPP1R13LQ8WUF5 828 aa14.55□□□□□ -0.08
COL18A1-206ENST00000459895 SDF4Q9BRK5 362 aa14.55□□□□□ -0.08
COL18A1-206ENST00000459895 STARD7Q9NQZ5 370 aa14.55□□□□□ -0.08
COL18A1-206ENST00000459895 POLR3EQ9NVU0 708 aa14.55□□□□□ -0.08
COL18A1-206ENST00000459895 MAFGO15525 162 aa14.54□□□□□ -0.08
COL18A1-206ENST00000459895 DHX15O43143 795 aaKnown RBP14.54□□□□□ -0.08
COL18A1-206ENST00000459895 CCNE2O96020 404 aa14.54□□□□□ -0.08
COL18A1-206ENST00000459895 F2P00734 622 aa14.54□□□□□ -0.08
COL18A1-206ENST00000459895 LGALS2P05162 132 aa14.54□□□□□ -0.08
COL18A1-206ENST00000459895 HSP90AA1P07900 732 aaKnown RBP14.54□□□□□ -0.08
COL18A1-206ENST00000459895 RGS19P49795 217 aa14.54□□□□□ -0.08
COL18A1-206ENST00000459895 SNX17Q15036 470 aa14.54□□□□□ -0.08
COL18A1-206ENST00000459895 LARP1BQ659C4 914 aaKnown RBP14.54□□□□□ -0.08
COL18A1-206ENST00000459895 PPP4R3AQ6IN85 833 aa14.54□□□□□ -0.08
COL18A1-206ENST00000459895 GIMAP8Q8ND71 665 aaPredicted RBP14.54□□□□□ -0.08
COL18A1-206ENST00000459895 SLC5A5Q92911 643 aa14.54□□□□□ -0.08
COL18A1-206ENST00000459895 KCNMB3Q9NPA1 279 aa14.54□□□□□ -0.08
COL18A1-206ENST00000459895 SLC9A2Q9UBY0 812 aa14.54□□□□□ -0.08
COL18A1-206ENST00000459895 ELP1O95163 1332 aa14.54□□□□□ -0.08
COL18A1-206ENST00000459895 SIP14410 1827 aa14.54□□□□□ -0.08
COL18A1-206ENST00000459895 GRIN2DO15399 1336 aa14.53□□□□□ -0.08
COL18A1-206ENST00000459895 EMSYQ7Z589 1322 aa14.53□□□□□ -0.08
COL18A1-206ENST00000459895 ZEB2O60315 1214 aa14.53□□□□□ -0.08
COL18A1-206ENST00000459895 NEMFO60524 1076 aa14.53□□□□□ -0.08
COL18A1-206ENST00000459895 SYT1P21579 422 aa14.53□□□□□ -0.08
COL18A1-206ENST00000459895 TCF7P36402 384 aaPredicted RBP14.53□□□□□ -0.08
COL18A1-206ENST00000459895 ACTR2P61160 394 aa14.53□□□□□ -0.08
COL18A1-206ENST00000459895 DGKDQ16760 1214 aa14.53□□□□□ -0.08
COL18A1-206ENST00000459895 TRIM60Q495X7 471 aa14.53□□□□□ -0.08
COL18A1-206ENST00000459895 BRDTQ58F21 947 aaPredicted RBP14.53□□□□□ -0.08
COL18A1-206ENST00000459895 LRCH2Q5VUJ6 765 aa14.53□□□□□ -0.08
COL18A1-206ENST00000459895 FERMT3Q86UX7 667 aa14.53□□□□□ -0.08
COL18A1-206ENST00000459895 KAT2BQ92831 832 aa14.53□□□□□ -0.08
COL18A1-206ENST00000459895 GLT1D1Q96MS3 346 aa14.53□□□□□ -0.08
COL18A1-206ENST00000459895 MTG1Q9BT17 334 aaPredicted RBP14.53□□□□□ -0.08
COL18A1-206ENST00000459895 PCDH10Q9P2E7 1040 aa14.53□□□□□ -0.08
COL18A1-206ENST00000459895 A0A0U1RQG5 324 aaPredicted RBP14.52□□□□□ -0.09
COL18A1-206ENST00000459895 CHMP2AO43633 222 aa14.52□□□□□ -0.09
COL18A1-206ENST00000459895 GAS7O60861 476 aa14.52□□□□□ -0.09
COL18A1-206ENST00000459895 ATP2B1P20020 1258 aa14.52□□□□□ -0.09
COL18A1-206ENST00000459895 PDCP20941 246 aa14.52□□□□□ -0.09
COL18A1-206ENST00000459895 RTP1P59025 263 aa14.52□□□□□ -0.09
COL18A1-206ENST00000459895 RESTQ13127 1097 aa14.52□□□□□ -0.09
COL18A1-206ENST00000459895 TTC38Q5R3I4 469 aa14.52□□□□□ -0.09
COL18A1-206ENST00000459895 NAP1L4Q99733 375 aaKnown RBP14.52□□□□□ -0.09
COL18A1-206ENST00000459895 C16orf70Q9BSU1 422 aa14.52□□□□□ -0.09
COL18A1-206ENST00000459895 UNC45AQ9H3U1 944 aa14.52□□□□□ -0.09
COL18A1-206ENST00000459895 VAV3Q9UKW4 847 aa14.52□□□□□ -0.09
COL18A1-206ENST00000459895 NOL7Q9UMY1 257 aaKnown RBP14.52□□□□□ -0.09
COL18A1-206ENST00000459895 MTMR6Q9Y217 621 aa14.52□□□□□ -0.09
COL18A1-206ENST00000459895 IGSF9BQ9UPX0 1349 aa14.51□□□□□ -0.09
COL18A1-206ENST00000459895 GSTTP1A0A1W2PQM5 241 aa14.51□□□□□ -0.09
COL18A1-206ENST00000459895 PSMD10O75832 226 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms