RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 PRB1P04280 392 aa6.72□□□□□ -1.33
CDKN3-205ENST00000458126 SSTR4P31391 388 aa6.72□□□□□ -1.33
CDKN3-205ENST00000458126 SERPINB4P48594 390 aa6.72□□□□□ -1.33
CDKN3-205ENST00000458126 NLRP12P59046 1061 aa6.72□□□□□ -1.33
CDKN3-205ENST00000458126 TLE2Q04725 743 aa6.72□□□□□ -1.33
CDKN3-205ENST00000458126 PPIGQ13427 754 aaKnown RBP eCLIP6.72□□□□□ -1.33
CDKN3-205ENST00000458126 VGLL4Q14135 290 aa6.72□□□□□ -1.33
CDKN3-205ENST00000458126 ECM1Q16610 540 aa6.72□□□□□ -1.33
CDKN3-205ENST00000458126 HSP90AB2PQ58FF8 381 aa6.72□□□□□ -1.33
CDKN3-205ENST00000458126 FDX2Q6P4F2 183 aa6.72□□□□□ -1.33
CDKN3-205ENST00000458126 ZNF365Q70YC5 407 aa6.72□□□□□ -1.33
CDKN3-205ENST00000458126 CCER1Q8TC90 406 aaPredicted RBP6.72□□□□□ -1.33
CDKN3-205ENST00000458126 KRTAP9-2Q9BYQ4 174 aa6.72□□□□□ -1.33
CDKN3-205ENST00000458126 BSDC1Q9NW68 430 aaPredicted RBP6.72□□□□□ -1.33
CDKN3-205ENST00000458126 ZNF652Q9Y2D9 606 aa6.72□□□□□ -1.33
CDKN3-205ENST00000458126 ASXL3Q9C0F0 2248 aa6.72□□□□□ -1.33
CDKN3-205ENST00000458126 PHIPQ8WWQ0 1821 aa6.71□□□□□ -1.33
CDKN3-205ENST00000458126 HMX2A2RU54 273 aa6.71□□□□□ -1.34
CDKN3-205ENST00000458126 BBOX1O75936 387 aa6.71□□□□□ -1.34
CDKN3-205ENST00000458126 SASH1O94885 1247 aa6.71□□□□□ -1.34
CDKN3-205ENST00000458126 BMP3P12645 472 aa6.71□□□□□ -1.34
CDKN3-205ENST00000458126 CCND3P30281 292 aaPredicted RBP6.71□□□□□ -1.34
CDKN3-205ENST00000458126 GRIK1P39086 918 aa6.71□□□□□ -1.34
CDKN3-205ENST00000458126 PREPP48147 710 aa6.71□□□□□ -1.34
CDKN3-205ENST00000458126 ANGPT1Q15389 498 aa6.71□□□□□ -1.34
CDKN3-205ENST00000458126 NBPF12Q5TAG4 269 aaPredicted RBP6.71□□□□□ -1.34
CDKN3-205ENST00000458126 BEND4Q6ZU67 534 aa6.71□□□□□ -1.34
CDKN3-205ENST00000458126 GLYCTKQ8IVS8 523 aa6.71□□□□□ -1.34
CDKN3-205ENST00000458126 SMG8Q8ND04 991 aaKnown RBP6.71□□□□□ -1.34
CDKN3-205ENST00000458126 ARNTL2Q8WYA1 636 aa6.71□□□□□ -1.34
CDKN3-205ENST00000458126 MTIF3Q9H2K0 278 aaKnown RBP6.71□□□□□ -1.34
CDKN3-205ENST00000458126 SUGCTQ9HAC7 445 aa6.71□□□□□ -1.34
CDKN3-205ENST00000458126 FOXD3Q9UJU5 478 aaPredicted RBP6.71□□□□□ -1.34
CDKN3-205ENST00000458126 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.7□□□□□ -1.34
CDKN3-205ENST00000458126 H3BRB1 525 aa6.7□□□□□ -1.34
CDKN3-205ENST00000458126 BRD1O95696 1058 aa6.7□□□□□ -1.34
CDKN3-205ENST00000458126 TGFB1P01137 390 aa6.7□□□□□ -1.34
CDKN3-205ENST00000458126 CA3P07451 260 aa6.7□□□□□ -1.34
CDKN3-205ENST00000458126 RRP1BQ14684 758 aaKnown RBP6.7□□□□□ -1.34
CDKN3-205ENST00000458126 PEAR1Q5VY43 1037 aaPredicted RBP6.7□□□□□ -1.34
CDKN3-205ENST00000458126 TMPRSS13Q9BYE2 586 aa6.7□□□□□ -1.34
CDKN3-205ENST00000458126 TUT1Q9H6E5 874 aaKnown RBP6.7□□□□□ -1.34
CDKN3-205ENST00000458126 GJD2Q9UKL4 321 aa6.7□□□□□ -1.34
CDKN3-205ENST00000458126 NF1P21359 2839 aa6.7□□□□□ -1.34
CDKN3-205ENST00000458126 ABCC4O15439 1325 aa6.7□□□□□ -1.34
CDKN3-205ENST00000458126 CENPJQ9HC77 1338 aaPredicted RBP6.7□□□□□ -1.34
CDKN3-205ENST00000458126 PTPRQQ9UMZ3 2332 aa6.7□□□□□ -1.34
CDKN3-205ENST00000458126 EDC4Q6P2E9 1401 aaKnown RBP6.69□□□□□ -1.34
CDKN3-205ENST00000458126 PRR19A6NJB7 356 aa6.69□□□□□ -1.34
CDKN3-205ENST00000458126 MED26O95402 600 aa6.69□□□□□ -1.34
CDKN3-205ENST00000458126 CYP2C8P10632 490 aa6.69□□□□□ -1.34
CDKN3-205ENST00000458126 ESRRAP11474 423 aaPredicted RBP6.69□□□□□ -1.34
CDKN3-205ENST00000458126 CACNB2Q08289 660 aaPredicted RBP6.69□□□□□ -1.34
CDKN3-205ENST00000458126 HGSNATQ68CP4 663 aa6.69□□□□□ -1.34
CDKN3-205ENST00000458126 MFSD5Q6N075 450 aa6.69□□□□□ -1.34
CDKN3-205ENST00000458126 SUMF1Q8NBK3 374 aa6.69□□□□□ -1.34
CDKN3-205ENST00000458126 SLC44A5Q8NCS7 719 aa6.69□□□□□ -1.34
CDKN3-205ENST00000458126 DDX1Q92499 740 aaKnown RBP6.69□□□□□ -1.34
CDKN3-205ENST00000458126 LPAR1Q92633 364 aa6.69□□□□□ -1.34
CDKN3-205ENST00000458126 KCNF1Q9H3M0 494 aa6.69□□□□□ -1.34
CDKN3-205ENST00000458126 CYP4F12Q9HCS2 524 aa6.69□□□□□ -1.34
CDKN3-205ENST00000458126 R4GN57 208 aa6.69□□□□□ -1.34
CDKN3-205ENST00000458126 PSME4Q14997 1843 aa6.69□□□□□ -1.34
CDKN3-205ENST00000458126 LOC100289279A0A1B0GTE1 492 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 TIAF1O95411 115 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 TIMP1P01033 207 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 NEFLP07196 543 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 ARHGAP4P98171 946 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 EXOSC6Q5RKV6 272 aaKnown RBP6.68□□□□□ -1.34
CDKN3-205ENST00000458126 C19orf48Q6RUI8 117 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 NPM2Q86SE8 214 aaKnown RBP6.68□□□□□ -1.34
CDKN3-205ENST00000458126 ERO1BQ86YB8 467 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 ZFPM1Q8IX07 1006 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 GALNT12Q8IXK2 581 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.68□□□□□ -1.34
CDKN3-205ENST00000458126 NETO1Q8TDF5 533 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 ASAP3Q8TDY4 903 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 GATA6Q92908 595 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 ZBED3Q96IU2 234 aaPredicted RBP6.68□□□□□ -1.34
CDKN3-205ENST00000458126 NYXQ9GZU5 481 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 TMEM39AQ9NV64 488 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 BRPF3Q9ULD4 1205 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 GNEQ9Y223 722 aaKnown RBP6.68□□□□□ -1.34
CDKN3-205ENST00000458126 CSADQ9Y600 493 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 ZNF804BA4D1E1 1349 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 AK9Q5TCS8 1911 aa6.68□□□□□ -1.34
CDKN3-205ENST00000458126 KRTAP9-6A0A140TA67 174 aa6.67□□□□□ -1.34
CDKN3-205ENST00000458126 A0A1B0GUL7 405 aa6.67□□□□□ -1.34
CDKN3-205ENST00000458126 STXBP3O00186 592 aa6.67□□□□□ -1.34
CDKN3-205ENST00000458126 GAS2O43903 313 aaKnown RBP6.67□□□□□ -1.34
CDKN3-205ENST00000458126 ACRP10323 421 aa6.67□□□□□ -1.34
CDKN3-205ENST00000458126 SPINK2P20155 84 aa6.67□□□□□ -1.34
CDKN3-205ENST00000458126 MAP4P27816 1152 aaKnown RBP6.67□□□□□ -1.34
CDKN3-205ENST00000458126 TAP1Q03518 808 aa6.67□□□□□ -1.34
CDKN3-205ENST00000458126 PPIL2Q13356 520 aa6.67□□□□□ -1.34
CDKN3-205ENST00000458126 CBX2Q14781 532 aaPredicted RBP6.67□□□□□ -1.34
CDKN3-205ENST00000458126 COL19A1Q14993 1142 aa6.67□□□□□ -1.34
CDKN3-205ENST00000458126 COL28A1Q2UY09 1125 aa6.67□□□□□ -1.34
CDKN3-205ENST00000458126 TMEM67Q5HYA8 995 aa6.67□□□□□ -1.34
CDKN3-205ENST00000458126 DTX1Q86Y01 620 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms