RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 BOLA3Q53S33 107 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 C12orf60Q5U649 245 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 THOC7Q6I9Y2 204 aaKnown RBP7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 OLFML1Q6UWY5 402 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 RSRC2Q7L4I2 434 aaKnown RBP7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 MAATS1Q7Z4T9 603 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 SAPCD2Q86UD0 394 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 EFCAB3Q8N7B9 438 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 NECAB1Q8N987 351 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 CNNM3Q8NE01 707 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 IRGQQ8WZA9 623 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 MPP4Q96JB8 637 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 LLPHQ9BRT6 129 aaKnown RBP7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 TCHPQ9BT92 498 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 LY9Q9HBG7 655 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 TMEM165Q9HC07 324 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 ZSWIM5Q9P217 1185 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 VPS18Q9P253 973 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 PCSK1NQ9UHG2 260 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 HOOK1Q9UJC3 728 aaKnown RBP7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 HPS5Q9UPZ3 1129 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 CAPN7Q9Y6W3 813 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 LTBP3Q9NS15 1303 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 SBF1O95248 1867 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 USP17L3A6NCW0 530 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 USP17L4A6NCW7 530 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 PALM3A6NDB9 673 aaPredicted RBP7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 H3BQF6 201 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 PPIP5K2O43314 1243 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 PARP1P09874 1014 aaKnown RBP7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 CCDC192P0DO97 292 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 CCNG1P51959 295 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 RCAN1P53805 252 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 LONRF2Q1L5Z9 754 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 CHST3Q7LGC8 479 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 USP17L1Q7RTZ2 530 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 TTC30AQ86WT1 665 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 LRRC8AQ8IWT6 810 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 TRIML1Q8N9V2 468 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 WHAMMQ8TF30 809 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 SREK1Q8WXA9 508 aaKnown RBP7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 ZDHHC15Q96MV8 337 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 GSDMAQ96QA5 445 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 CD248Q9HCU0 757 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 GPHNQ9NQX3 736 aaPredicted RBP7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 KCNQ5Q9NR82 932 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 GINM1Q9NU53 330 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 TTF2Q9UNY4 1162 aaKnown RBP7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 MAPK8IP1Q9UQF2 711 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 FLT1P17948 1338 aa7.52□□□□□ -1.21
CUBNP3-201ENST00000457461 CYP2D7A0A087X1C5 515 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 MGEA5O60502 916 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 CTDNEP1O95476 244 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 RPSAP08865 295 aaKnown RBP7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 SKIP12755 728 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 ENPP1P22413 925 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 GJB2P29033 226 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 OXCT1P55809 520 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 TUBA1BP68363 451 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 EVX2Q03828 476 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 MAP7Q14244 749 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 SEC23AQ15436 765 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 ENOX2Q16206 610 aaKnown RBP7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 TRIM71Q2Q1W2 868 aaKnown RBP7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 CCDC144BQ3MJ40 725 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 GNPTABQ3T906 1256 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 DALRD3Q5D0E6 543 aaKnown RBP7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 APOBEC3HQ6NTF7 200 aaKnown RBP7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 TUBA1AQ71U36 451 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 TMC6Q7Z403 805 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 CCDC144CPQ8IYA2 1237 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 NSUN7Q8NE18 718 aaKnown RBP7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 SNX27Q96L92 541 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 GMLQ99445 158 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 SLC39A3Q9BRY0 314 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 MXD3Q9BW11 206 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 CAPS2Q9BXY5 557 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 EIF2AQ9BY44 585 aaKnown RBP7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 SYNCQ9H7C4 482 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 IMPACTQ9P2X3 320 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 SEL1LQ9UBV2 794 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 G3BP2Q9UN86 482 aaKnown RBP7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 ASB3Q9Y575 518 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 BZW2Q9Y6E2 419 aaKnown RBP7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 MYO3BQ8WXR4 1341 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 COL2A1P02458 1487 aaPredicted RBP7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 WDR33Q9C0J8 1336 aaKnown RBP7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 GOLGA6L10A0A0M3HER8 536 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 KLF18A0A0U1RQI7 1052 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 PABPN1LA6NDY0 278 aaKnown RBP7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 RASSF10A6NK89 507 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 MINDY4BA8MYZ0 360 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 PPP1R12BO60237 982 aaPredicted RBP7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 PEX14O75381 377 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 WDHD1O75717 1129 aaPredicted RBP7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 USP17L8P0C7I0 530 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 CYP2D6P10635 497 aa7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 MYCLP1P12525 358 aaPredicted RBP7.51□□□□□ -1.21
CUBNP3-201ENST00000457461 CCNCP24863 283 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms