RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 BEX3Q00994 111 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 NR5A1Q13285 461 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 KCNA10Q16322 511 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 GNPTABQ3T906 1256 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 CEP55Q53EZ4 464 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 EARS2Q5JPH6 523 aaKnown RBP11.46□□□□□ -0.57
ATG4A-206ENST00000457035 GNASQ5JWF2 1037 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 MYSM1Q5VVJ2 828 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 RNF180Q86T96 592 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 NLRX1Q86UT6 975 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 FAM184AQ8NB25 1140 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 TBCKQ8TEA7 893 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 GPRASP2Q96D09 838 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 C8orf76Q96K31 380 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 SENP7Q9BQF6 1050 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 TSEN34Q9BSV6 310 aaKnown RBP11.46□□□□□ -0.57
ATG4A-206ENST00000457035 TMEM121BQ9BXQ6 578 aaPredicted RBP11.46□□□□□ -0.57
ATG4A-206ENST00000457035 AP5M1Q9H0R1 490 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 SPC25Q9HBM1 224 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.46□□□□□ -0.57
ATG4A-206ENST00000457035 TRIP12Q14669 1992 aaPredicted RBP11.46□□□□□ -0.58
ATG4A-206ENST00000457035 TRIOBPQ9H2D6 2365 aa11.46□□□□□ -0.58
ATG4A-206ENST00000457035 MYH9P35579 1960 aaKnown RBP11.45□□□□□ -0.58
ATG4A-206ENST00000457035 SCN10AQ9Y5Y9 1956 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 IGLV3-22A0A075B6J6 115 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 A6NJR5 290 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 FIBPO43427 364 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 GH1P01241 217 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 ARP10275 920 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 UBA1P22314 1058 aaKnown RBP11.45□□□□□ -0.58
ATG4A-206ENST00000457035 KRT2P35908 639 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 GUCY1B3Q02153 619 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 ARHGAP1Q07960 439 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 CELF3Q5SZQ8 465 aaKnown RBP11.45□□□□□ -0.58
ATG4A-206ENST00000457035 NIPA1Q7RTP0 329 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 KRT25Q7Z3Z0 450 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 NECAB2Q7Z6G3 386 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 OR6J1Q8NGC5 347 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 EMID1Q96A84 441 aaPredicted RBP11.45□□□□□ -0.58
ATG4A-206ENST00000457035 INTS4Q96HW7 963 aaKnown RBP11.45□□□□□ -0.58
ATG4A-206ENST00000457035 KCNH7Q9NS40 1196 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 PHF24Q9UPV7 400 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 SMC3Q9UQE7 1217 aa11.45□□□□□ -0.58
ATG4A-206ENST00000457035 CYP3A7-CYP3A51PA0A087WV96 503 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 KBTBD13C9JR72 458 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 GGPS1O95749 300 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 ASGR1P07306 291 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 KCNA2P16389 499 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 CYP3A7P24462 503 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 ZNF76P36508 570 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 ACLYP53396 1101 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 MTMR1Q13613 665 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 LAMC2Q13753 1193 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 TRIM29Q14134 588 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 NEDD9Q14511 834 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 NONOQ15233 471 aaKnown RBP eCLIP11.44□□□□□ -0.58
ATG4A-206ENST00000457035 FSCN1Q16658 493 aaKnown RBP11.44□□□□□ -0.58
ATG4A-206ENST00000457035 INF2Q27J81 1249 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 DHX37Q8IY37 1157 aaKnown RBP11.44□□□□□ -0.58
ATG4A-206ENST00000457035 DIS3L2Q8IYB7 885 aaKnown RBP11.44□□□□□ -0.58
ATG4A-206ENST00000457035 PCSK9Q8NBP7 692 aaKnown RBP11.44□□□□□ -0.58
ATG4A-206ENST00000457035 FBXO22Q8NEZ5 403 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 AFG1LQ8WV93 481 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 LENG9Q96B70 501 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 CDHR1Q96JP9 859 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 MBOAT7Q96N66 472 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 SENP6Q9GZR1 1112 aaPredicted RBP11.44□□□□□ -0.58
ATG4A-206ENST00000457035 C11orf49Q9H6J7 331 aa11.44□□□□□ -0.58
ATG4A-206ENST00000457035 CCDC194A0A1B0GVG4 234 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 FAM205CA6NFA0 338 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 MOXD2PA6NHM9 499 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 HSDL1Q3SXM5 330 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 MOXD1Q6UVY6 613 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 PIK3AP1Q6ZUJ8 805 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 CYFIP1Q7L576 1253 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 PLA2G4DQ86XP0 818 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 PPTC7Q8NI37 304 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 FERMT2Q96AC1 680 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 MFRPQ9BY79 579 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 FOXP1Q9H334 677 aaPredicted RBP11.43□□□□□ -0.58
ATG4A-206ENST00000457035 MLXIPQ9HAP2 919 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 AGO4Q9HCK5 861 aaKnown RBP11.43□□□□□ -0.58
ATG4A-206ENST00000457035 BRMS1Q9HCU9 246 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 KIF3AQ9Y496 699 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 TELO2Q9Y4R8 837 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 NR2E3Q9Y5X4 410 aa11.43□□□□□ -0.58
ATG4A-206ENST00000457035 A0A1W2PQ45 241 aaPredicted RBP11.42□□□□□ -0.58
ATG4A-206ENST00000457035 A0A1W2PQY0 241 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 DHX15O43143 795 aaKnown RBP11.42□□□□□ -0.58
ATG4A-206ENST00000457035 ZEB2O60315 1214 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 EVI5O60447 810 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 SORBS3O60504 671 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 PPFIA4O75335 1185 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 MMP3P08254 477 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 HOXD8P13378 290 aaPredicted RBP11.42□□□□□ -0.58
ATG4A-206ENST00000457035 U2AF2P26368 475 aaKnown RBP eCLIP11.42□□□□□ -0.582e-7■□□□□ 9.2
ATG4A-206ENST00000457035 CPT1AP50416 773 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 PURAQ00577 322 aaKnown RBP11.42□□□□□ -0.58
ATG4A-206ENST00000457035 ITGB3BPQ13352 177 aaPredicted RBP11.42□□□□□ -0.58
ATG4A-206ENST00000457035 SAFBQ15424 915 aaKnown RBP eCLIP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms