RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 WASF1Q92558 559 aa26.43■■□□□ 1.82
CBX3-204ENST00000456948 SDF4Q9BRK5 362 aa26.43■■□□□ 1.82
CBX3-204ENST00000456948 PPP1R12CQ9BZL4 782 aa26.43■■□□□ 1.82
CBX3-204ENST00000456948 TMEM260Q9NX78 707 aa26.43■■□□□ 1.82
CBX3-204ENST00000456948 VPS54Q9P1Q0 977 aa26.43■■□□□ 1.82
CBX3-204ENST00000456948 F2P00734 622 aa26.42■■□□□ 1.82
CBX3-204ENST00000456948 ARHGAP4P98171 946 aa26.42■■□□□ 1.82
CBX3-204ENST00000456948 SEMA3FQ13275 785 aa26.42■■□□□ 1.82
CBX3-204ENST00000456948 KIAA0753Q2KHM9 967 aa26.42■■□□□ 1.82
CBX3-204ENST00000456948 CCDC155Q8N6L0 562 aa26.42■■□□□ 1.82
CBX3-204ENST00000456948 KAT2BQ92831 832 aa26.42■■□□□ 1.82
CBX3-204ENST00000456948 PGBD1Q96JS3 809 aa26.42■■□□□ 1.82
CBX3-204ENST00000456948 TRMT13Q9NUP7 481 aaKnown RBP26.42■■□□□ 1.82
CBX3-204ENST00000456948 ZNF215Q9UL58 517 aaPredicted RBP26.42■■□□□ 1.82
CBX3-204ENST00000456948 ZNF286BP0CG31 522 aa26.41■■□□□ 1.82
CBX3-204ENST00000456948 ITGB8P26012 769 aa26.41■■□□□ 1.82
CBX3-204ENST00000456948 BFSP2Q13515 415 aa26.41■■□□□ 1.82
CBX3-204ENST00000456948 NIPA1Q7RTP0 329 aa26.41■■□□□ 1.82
CBX3-204ENST00000456948 RETREG2Q8NC44 543 aa26.41■■□□□ 1.82
CBX3-204ENST00000456948 ALG1Q9BT22 464 aa26.41■■□□□ 1.82
CBX3-204ENST00000456948 KCNH7Q9NS40 1196 aa26.41■■□□□ 1.82
CBX3-204ENST00000456948 H3BRB1 525 aa26.4■■□□□ 1.82
CBX3-204ENST00000456948 PTGISQ16647 500 aa26.4■■□□□ 1.82
CBX3-204ENST00000456948 LRIT3Q3SXY7 679 aa26.4■■□□□ 1.82
CBX3-204ENST00000456948 IL27Q8NEV9 243 aa26.4■■□□□ 1.82
CBX3-204ENST00000456948 SEPT1Q8WYJ6 367 aa26.4■■□□□ 1.82
CBX3-204ENST00000456948 GPR20Q99678 358 aa26.4■■□□□ 1.82
CBX3-204ENST00000456948 TUT1Q9H6E5 874 aaKnown RBP26.4■■□□□ 1.82
CBX3-204ENST00000456948 PCDHA4Q9UN74 947 aa26.4■■□□□ 1.82
CBX3-204ENST00000456948 STK36Q9NRP7 1315 aa26.39■■□□□ 1.82
CBX3-204ENST00000456948 LTBP2Q14767 1821 aa26.39■■□□□ 1.82
CBX3-204ENST00000456948 SZT2Q5T011 3432 aa26.39■■□□□ 1.82
CBX3-204ENST00000456948 LGALS2P05162 132 aa26.39■■□□□ 1.82
CBX3-204ENST00000456948 CYP3A4P08684 503 aa26.39■■□□□ 1.82
CBX3-204ENST00000456948 KCNA2P16389 499 aa26.39■■□□□ 1.82
CBX3-204ENST00000456948 SP4Q02446 784 aa26.39■■□□□ 1.82
CBX3-204ENST00000456948 RPUSD2Q8IZ73 545 aaKnown RBP26.39■■□□□ 1.82
CBX3-204ENST00000456948 NOC4LQ9BVI4 516 aaKnown RBP26.39■■□□□ 1.82
CBX3-204ENST00000456948 HAS3O00219 553 aa26.38■■□□□ 1.81
CBX3-204ENST00000456948 MEIS1O00470 390 aa26.38■■□□□ 1.81
CBX3-204ENST00000456948 CYP2C18P33260 490 aa26.38■■□□□ 1.81
CBX3-204ENST00000456948 SETQ01105 290 aaPredicted RBP26.38■■□□□ 1.81
CBX3-204ENST00000456948 TNPO1Q92973 898 aaKnown RBP26.38■■□□□ 1.81
CBX3-204ENST00000456948 JPH1Q9HDC5 661 aaPredicted RBP26.38■■□□□ 1.81
CBX3-204ENST00000456948 PKD2L1Q9P0L9 805 aa26.38■■□□□ 1.81
CBX3-204ENST00000456948 GTF2IRD1Q9UHL9 959 aa26.38■■□□□ 1.81
CBX3-204ENST00000456948 ATP9AO75110 1047 aa26.37■■□□□ 1.81
CBX3-204ENST00000456948 GNAT1P11488 350 aa26.37■■□□□ 1.81
CBX3-204ENST00000456948 CYP2C9P11712 490 aa26.37■■□□□ 1.81
CBX3-204ENST00000456948 PLA2G4DQ86XP0 818 aa26.37■■□□□ 1.81
CBX3-204ENST00000456948 CAGE1Q8TC20 777 aa26.37■■□□□ 1.81
CBX3-204ENST00000456948 C16orf70Q9BSU1 422 aa26.37■■□□□ 1.81
CBX3-204ENST00000456948 ORC3Q9UBD5 711 aaPredicted RBP26.37■■□□□ 1.81
CBX3-204ENST00000456948 HDAC6Q9UBN7 1215 aa26.37■■□□□ 1.81
CBX3-204ENST00000456948 SLC9A2Q9UBY0 812 aa26.37■■□□□ 1.81
CBX3-204ENST00000456948 TCEAL9Q9UHQ7 104 aa26.37■■□□□ 1.81
CBX3-204ENST00000456948 LIMCH1Q9UPQ0 1083 aa26.37■■□□□ 1.81
CBX3-204ENST00000456948 NFASCO94856 1347 aa26.37■■□□□ 1.81
CBX3-204ENST00000456948 PITPNM1O00562 1244 aa26.36■■□□□ 1.81
CBX3-204ENST00000456948 USP11P51784 963 aa26.36■■□□□ 1.81
CBX3-204ENST00000456948 SHHQ15465 462 aa26.36■■□□□ 1.81
CBX3-204ENST00000456948 ME3Q16798 604 aa26.36■■□□□ 1.81
CBX3-204ENST00000456948 UTP14CQ5TAP6 766 aaKnown RBP26.36■■□□□ 1.81
CBX3-204ENST00000456948 PSRC1Q6PGN9 363 aaPredicted RBP26.36■■□□□ 1.81
CBX3-204ENST00000456948 BLIDQ8IZY5 108 aa26.36■■□□□ 1.81
CBX3-204ENST00000456948 GTF3C6Q969F1 213 aa26.36■■□□□ 1.81
CBX3-204ENST00000456948 MTIF3Q9H2K0 278 aaKnown RBP26.36■■□□□ 1.81
CBX3-204ENST00000456948 BCAS3Q9H6U6 928 aa26.36■■□□□ 1.81
CBX3-204ENST00000456948 CSF2RAP15509 400 aa26.35■■□□□ 1.81
CBX3-204ENST00000456948 TCF7P36402 384 aaPredicted RBP26.35■■□□□ 1.81
CBX3-204ENST00000456948 GDF6Q6KF10 455 aaPredicted RBP26.35■■□□□ 1.81
CBX3-204ENST00000456948 CYP2W1Q8TAV3 490 aa26.35■■□□□ 1.81
CBX3-204ENST00000456948 GLG1Q92896 1179 aa26.35■■□□□ 1.81
CBX3-204ENST00000456948 RNPC3Q96LT9 517 aaKnown RBP26.35■■□□□ 1.81
CBX3-204ENST00000456948 SMARCAD1Q9H4L7 1026 aa26.35■■□□□ 1.81
CBX3-204ENST00000456948 AZI2Q9H6S1 392 aa26.35■■□□□ 1.81
CBX3-204ENST00000456948 AGO4Q9HCK5 861 aaKnown RBP26.35■■□□□ 1.81
CBX3-204ENST00000456948 IL23AQ9NPF7 189 aa26.35■■□□□ 1.81
CBX3-204ENST00000456948 LAMA3Q16787 3333 aa26.34■■□□□ 1.81
CBX3-204ENST00000456948 RFC2P35250 354 aa26.34■■□□□ 1.81
CBX3-204ENST00000456948 RBM25P49756 843 aaKnown RBP26.34■■□□□ 1.81
CBX3-204ENST00000456948 CCL23P55773 120 aa26.34■■□□□ 1.81
CBX3-204ENST00000456948 NECAB1Q8N987 351 aa26.34■■□□□ 1.81
CBX3-204ENST00000456948 DAGLBQ8NCG7 672 aa26.34■■□□□ 1.81
CBX3-204ENST00000456948 ZSCAN31Q96LW9 406 aaPredicted RBP26.34■■□□□ 1.81
CBX3-204ENST00000456948 BRMS1Q9HCU9 246 aa26.34■■□□□ 1.81
CBX3-204ENST00000456948 ERAP1Q9NZ08 941 aa26.34■■□□□ 1.81
CBX3-204ENST00000456948 C17orf102A2RUQ5 167 aa26.33■■□□□ 1.81
CBX3-204ENST00000456948 PARNO95453 639 aaKnown RBP26.33■■□□□ 1.81
CBX3-204ENST00000456948 PFKMP08237 780 aa26.33■■□□□ 1.81
CBX3-204ENST00000456948 ARP10275 920 aa26.33■■□□□ 1.81
CBX3-204ENST00000456948 RASGRP4Q8TDF6 673 aa26.33■■□□□ 1.81
CBX3-204ENST00000456948 PPP1R13LQ8WUF5 828 aa26.33■■□□□ 1.81
CBX3-204ENST00000456948 TBC1D22BQ9NU19 505 aa26.33■■□□□ 1.81
CBX3-204ENST00000456948 FAM86B1E9PN63 330 aa26.32■■□□□ 1.8
CBX3-204ENST00000456948 IPO5O00410 1097 aaKnown RBP26.32■■□□□ 1.8
CBX3-204ENST00000456948 FAM86B2P0C5J1 330 aa26.32■■□□□ 1.8
CBX3-204ENST00000456948 CIITAP33076 1130 aa26.32■■□□□ 1.8
CBX3-204ENST00000456948 PTK7Q13308 1070 aa26.32■■□□□ 1.8
CBX3-204ENST00000456948 TRIM29Q14134 588 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms