RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 TRIP12Q14669 1992 aaPredicted RBP18.56■□□□□ 0.56
CPSF6-203ENST00000456847 HAS3O00219 553 aa18.55■□□□□ 0.56
CPSF6-203ENST00000456847 PRPF3O43395 683 aaKnown RBP18.55■□□□□ 0.56
CPSF6-203ENST00000456847 PPFIA3O75145 1194 aa18.55■□□□□ 0.56
CPSF6-203ENST00000456847 FGBP02675 491 aa18.55■□□□□ 0.56
CPSF6-203ENST00000456847 AP3B2Q13367 1082 aa18.55■□□□□ 0.56
CPSF6-203ENST00000456847 SENP7Q9BQF6 1050 aa18.55■□□□□ 0.56
CPSF6-203ENST00000456847 PITPNM1O00562 1244 aa18.55■□□□□ 0.56
CPSF6-203ENST00000456847 ITGB5P18084 799 aa18.55■□□□□ 0.56
CPSF6-203ENST00000456847 UTP14CQ5TAP6 766 aaKnown RBP18.55■□□□□ 0.56
CPSF6-203ENST00000456847 DEFB128Q7Z7B8 93 aa18.55■□□□□ 0.56
CPSF6-203ENST00000456847 GPR20Q99678 358 aa18.55■□□□□ 0.56
CPSF6-203ENST00000456847 LARP6Q9BRS8 491 aaKnown RBP18.55■□□□□ 0.56
CPSF6-203ENST00000456847 C16orf70Q9BSU1 422 aa18.55■□□□□ 0.56
CPSF6-203ENST00000456847 RNF26Q9BY78 433 aaPredicted RBP18.55■□□□□ 0.56
CPSF6-203ENST00000456847 C6orf50Q9HD87 102 aa18.55■□□□□ 0.56
CPSF6-203ENST00000456847 JADE2Q9NQC1 790 aa18.55■□□□□ 0.56
CPSF6-203ENST00000456847 H3BRB1 525 aa18.54■□□□□ 0.56
CPSF6-203ENST00000456847 CPLX1O14810 134 aa18.54■□□□□ 0.56
CPSF6-203ENST00000456847 EVCP57679 992 aa18.54■□□□□ 0.56
CPSF6-203ENST00000456847 JAKMIP3Q5VZ66 844 aa18.54■□□□□ 0.56
CPSF6-203ENST00000456847 OTOP2Q7RTS6 562 aa18.54■□□□□ 0.56
CPSF6-203ENST00000456847 CAGE1Q8TC20 777 aa18.54■□□□□ 0.56
CPSF6-203ENST00000456847 FAM161BQ96MY7 647 aa18.54■□□□□ 0.56
CPSF6-203ENST00000456847 TUT1Q9H6E5 874 aaKnown RBP18.54■□□□□ 0.56
CPSF6-203ENST00000456847 ZNF215Q9UL58 517 aaPredicted RBP18.54■□□□□ 0.56
CPSF6-203ENST00000456847 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.53■□□□□ 0.56
CPSF6-203ENST00000456847 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.53■□□□□ 0.56
CPSF6-203ENST00000456847 EIF5BO60841 1220 aaKnown RBP18.53■□□□□ 0.56
CPSF6-203ENST00000456847 PFKMP08237 780 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 KCNA2P16389 499 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 IFNAR1P17181 557 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 ZNF76P36508 570 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 STK3Q13188 491 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 TRIM22Q8IYM9 498 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 CCDC148Q8NFR7 591 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 HERVK_113Q902F9 699 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 MXRA8Q9BRK3 442 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 ESYT2A0FGR8 921 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 ZBBXA8MT70 800 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 ATP9AO75110 1047 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 RFC2P35250 354 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 NTRK3Q16288 839 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 PKN1Q16512 942 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 FAM109BQ6ICB4 259 aaPredicted RBP18.53■□□□□ 0.56
CPSF6-203ENST00000456847 CPLX2Q6PUV4 134 aaKnown RBP18.53■□□□□ 0.56
CPSF6-203ENST00000456847 TRIM50Q86XT4 487 aa18.53■□□□□ 0.56
CPSF6-203ENST00000456847 GBF1Q92538 1859 aa18.52■□□□□ 0.56
CPSF6-203ENST00000456847 IQCF3P0C7M6 154 aa18.52■□□□□ 0.56
CPSF6-203ENST00000456847 SREBF1P36956 1147 aa18.52■□□□□ 0.56
CPSF6-203ENST00000456847 CLK2P49760 499 aaKnown RBP18.52■□□□□ 0.56
CPSF6-203ENST00000456847 SSRP1Q08945 709 aaKnown RBP18.52■□□□□ 0.56
CPSF6-203ENST00000456847 REXO1Q8N1G1 1221 aaKnown RBP18.52■□□□□ 0.56
CPSF6-203ENST00000456847 AFAP1L1Q8TED9 768 aa18.52■□□□□ 0.56
CPSF6-203ENST00000456847 ZNF274Q96GC6 653 aaPredicted RBP18.52■□□□□ 0.56
CPSF6-203ENST00000456847 FTOQ9C0B1 505 aaKnown RBP eCLIP18.52■□□□□ 0.56
CPSF6-203ENST00000456847 ZMYND12Q9H0C1 365 aa18.52■□□□□ 0.56
CPSF6-203ENST00000456847 MTMR10Q9NXD2 777 aa18.52■□□□□ 0.56
CPSF6-203ENST00000456847 TELO2Q9Y4R8 837 aa18.52■□□□□ 0.56
CPSF6-203ENST00000456847 C17orf102A2RUQ5 167 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 MAFGO15525 162 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 SMIM10L2AP0DMW4 78 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 SMIM10L2BP0DMW5 78 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 ACTN1P12814 892 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 GNA11P29992 359 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 TCF7P36402 384 aaPredicted RBP18.51■□□□□ 0.55
CPSF6-203ENST00000456847 ANAPC15P60006 121 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 PTK7Q13308 1070 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 DHX38Q92620 1227 aaKnown RBP18.51■□□□□ 0.55
CPSF6-203ENST00000456847 CTAGE1Q96RT6 745 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 VPS54Q9P1Q0 977 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 KAT6AQ92794 2004 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 LAMA3Q16787 3333 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 ARHGAP4P98171 946 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 ZNF200P98182 395 aaPredicted RBP18.51■□□□□ 0.55
CPSF6-203ENST00000456847 RASIP1Q5U651 963 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 MCTP2Q6DN12 878 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 LRRC8DQ7L1W4 858 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 BICD2Q8TD16 824 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 SDF4Q9BRK5 362 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 KCNH7Q9NS40 1196 aa18.51■□□□□ 0.55
CPSF6-203ENST00000456847 CXXC1Q9P0U4 656 aaPredicted RBP18.51■□□□□ 0.55
CPSF6-203ENST00000456847 SELPP16109 830 aa18.5■□□□□ 0.55
CPSF6-203ENST00000456847 DNAJB2P25686 324 aa18.5■□□□□ 0.55
CPSF6-203ENST00000456847 CEP55Q53EZ4 464 aa18.5■□□□□ 0.55
CPSF6-203ENST00000456847 SEPT1Q8WYJ6 367 aa18.5■□□□□ 0.55
CPSF6-203ENST00000456847 ATP6V0A1Q93050 837 aa18.5■□□□□ 0.55
CPSF6-203ENST00000456847 JPH1Q9HDC5 661 aaPredicted RBP18.5■□□□□ 0.55
CPSF6-203ENST00000456847 GRXCR1A8MXD5 290 aa18.49■□□□□ 0.55
CPSF6-203ENST00000456847 CYP2W1Q8TAV3 490 aa18.49■□□□□ 0.55
CPSF6-203ENST00000456847 SLC4A7Q9Y6M7 1214 aa18.49■□□□□ 0.55
CPSF6-203ENST00000456847 ARP10275 920 aa18.49■□□□□ 0.55
CPSF6-203ENST00000456847 CKBP12277 381 aa18.49■□□□□ 0.55
CPSF6-203ENST00000456847 NLRP5P59047 1200 aa18.49■□□□□ 0.55
CPSF6-203ENST00000456847 RASGRP4Q8TDF6 673 aa18.49■□□□□ 0.55
CPSF6-203ENST00000456847 GLG1Q92896 1179 aa18.49■□□□□ 0.55
CPSF6-203ENST00000456847 SLC9A2Q9UBY0 812 aa18.49■□□□□ 0.55
CPSF6-203ENST00000456847 SZT2Q5T011 3432 aa18.48■□□□□ 0.55
CPSF6-203ENST00000456847 DEXIO95424 95 aa18.48■□□□□ 0.55
CPSF6-203ENST00000456847 GNAT1P11488 350 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms