RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 MAP3K14Q99558 947 aa21.65■■□□□ 1.06
COL20A1-204ENST00000455906 RAD9AQ99638 391 aa21.65■■□□□ 1.06
COL20A1-204ENST00000455906 TUT1Q9H6E5 874 aaKnown RBP21.65■■□□□ 1.06
COL20A1-204ENST00000455906 LY9Q9HBG7 655 aa21.65■■□□□ 1.06
COL20A1-204ENST00000455906 RBM8AQ9Y5S9 174 aaKnown RBP21.65■■□□□ 1.06
COL20A1-204ENST00000455906 C17orf102A2RUQ5 167 aa21.64■■□□□ 1.05
COL20A1-204ENST00000455906 STAM2O75886 525 aa21.64■■□□□ 1.05
COL20A1-204ENST00000455906 SMIM10L2AP0DMW4 78 aa21.64■■□□□ 1.05
COL20A1-204ENST00000455906 SMIM10L2BP0DMW5 78 aa21.64■■□□□ 1.05
COL20A1-204ENST00000455906 THPOP40225 353 aa21.64■■□□□ 1.05
COL20A1-204ENST00000455906 GNPTABQ3T906 1256 aa21.64■■□□□ 1.05
COL20A1-204ENST00000455906 ZNF654Q8IZM8 581 aa21.64■■□□□ 1.05
COL20A1-204ENST00000455906 MYL10Q9BUA6 226 aa21.64■■□□□ 1.05
COL20A1-204ENST00000455906 SPZ1Q9BXG8 430 aa21.64■■□□□ 1.05
COL20A1-204ENST00000455906 EMSYQ7Z589 1322 aa21.63■■□□□ 1.05
COL20A1-204ENST00000455906 LINC01553A4QN01 128 aa21.63■■□□□ 1.05
COL20A1-204ENST00000455906 RSPH10B2B2RC85 870 aa21.63■■□□□ 1.05
COL20A1-204ENST00000455906 RSPH10BP0C881 870 aa21.63■■□□□ 1.05
COL20A1-204ENST00000455906 COL9A3Q14050 684 aaPredicted RBP21.63■■□□□ 1.05
COL20A1-204ENST00000455906 AAK1Q2M2I8 961 aa21.63■■□□□ 1.05
COL20A1-204ENST00000455906 METTL7BQ6UX53 244 aa21.63■■□□□ 1.05
COL20A1-204ENST00000455906 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.63■■□□□ 1.05
COL20A1-204ENST00000455906 CYFIP1Q7L576 1253 aa21.63■■□□□ 1.05
COL20A1-204ENST00000455906 DBF4BQ8NFT6 615 aa21.63■■□□□ 1.05
COL20A1-204ENST00000455906 GDPD5Q8WTR4 605 aa21.63■■□□□ 1.05
COL20A1-204ENST00000455906 ATP6V0A1Q93050 837 aa21.63■■□□□ 1.05
COL20A1-204ENST00000455906 GPR20Q99678 358 aa21.63■■□□□ 1.05
COL20A1-204ENST00000455906 RNPEPQ9H4A4 650 aa21.63■■□□□ 1.05
COL20A1-204ENST00000455906 RTEL1Q9NZ71 1219 aa21.63■■□□□ 1.05
COL20A1-204ENST00000455906 COG5Q9UP83 839 aa21.63■■□□□ 1.05
COL20A1-204ENST00000455906 TELO2Q9Y4R8 837 aa21.63■■□□□ 1.05
COL20A1-204ENST00000455906 NOP56O00567 594 aaKnown RBP21.62■■□□□ 1.05
COL20A1-204ENST00000455906 MEIS2O14770 477 aa21.62■■□□□ 1.05
COL20A1-204ENST00000455906 TREHO43280 583 aa21.62■■□□□ 1.05
COL20A1-204ENST00000455906 FIBPO43427 364 aa21.62■■□□□ 1.05
COL20A1-204ENST00000455906 DDAH1O94760 285 aa21.62■■□□□ 1.05
COL20A1-204ENST00000455906 ERVK-21P61565 698 aa21.62■■□□□ 1.05
COL20A1-204ENST00000455906 IRX6P78412 446 aaPredicted RBP21.62■■□□□ 1.05
COL20A1-204ENST00000455906 NEDD9Q14511 834 aa21.62■■□□□ 1.05
COL20A1-204ENST00000455906 PLEKHG4Q58EX7 1191 aa21.62■■□□□ 1.05
COL20A1-204ENST00000455906 FAM117BQ6P1L5 589 aa21.62■■□□□ 1.05
COL20A1-204ENST00000455906 USP17L6PQ6QN14 398 aa21.62■■□□□ 1.05
COL20A1-204ENST00000455906 USP26Q9BXU7 913 aa21.62■■□□□ 1.05
COL20A1-204ENST00000455906 SUGCTQ9HAC7 445 aa21.62■■□□□ 1.05
COL20A1-204ENST00000455906 PIK3CDO00329 1044 aa21.61■■□□□ 1.05
COL20A1-204ENST00000455906 SMARCA1P28370 1054 aa21.61■■□□□ 1.05
COL20A1-204ENST00000455906 CTCFLQ8NI51 663 aaPredicted RBP21.61■■□□□ 1.05
COL20A1-204ENST00000455906 RRP36Q96EU6 259 aaKnown RBP21.61■■□□□ 1.05
COL20A1-204ENST00000455906 TGS1Q96RS0 853 aaKnown RBP21.61■■□□□ 1.05
COL20A1-204ENST00000455906 OSBPL7Q9BZF2 842 aa21.61■■□□□ 1.05
COL20A1-204ENST00000455906 LMCD1Q9NZU5 365 aa21.61■■□□□ 1.05
COL20A1-204ENST00000455906 MTUS1Q9ULD2 1270 aa21.61■■□□□ 1.05
COL20A1-204ENST00000455906 PRC1O43663 620 aa21.6■■□□□ 1.05
COL20A1-204ENST00000455906 PLEKHA8P1O95397 391 aa21.6■■□□□ 1.05
COL20A1-204ENST00000455906 KIF5BP33176 963 aa21.6■■□□□ 1.05
COL20A1-204ENST00000455906 PCNX4Q63HM2 1172 aa21.6■■□□□ 1.05
COL20A1-204ENST00000455906 TRIM50Q86XT4 487 aa21.6■■□□□ 1.05
COL20A1-204ENST00000455906 SMARCC2Q8TAQ2 1214 aa21.6■■□□□ 1.05
COL20A1-204ENST00000455906 MTA3Q9BTC8 594 aa21.6■■□□□ 1.05
COL20A1-204ENST00000455906 SETD4Q9NVD3 440 aa21.6■■□□□ 1.05
COL20A1-204ENST00000455906 SH2B2O14492 632 aaPredicted RBP21.59■■□□□ 1.05
COL20A1-204ENST00000455906 ADAM17P78536 824 aa21.59■■□□□ 1.05
COL20A1-204ENST00000455906 HTRA4P83105 476 aaPredicted RBP21.59■■□□□ 1.05
COL20A1-204ENST00000455906 XRRA1Q6P2D8 792 aa21.59■■□□□ 1.05
COL20A1-204ENST00000455906 SRBD1Q8N5C6 995 aaKnown RBP21.59■■□□□ 1.05
COL20A1-204ENST00000455906 KAT6AQ92794 2004 aa21.59■■□□□ 1.05
COL20A1-204ENST00000455906 HLA-CQ95604 372 aa21.59■■□□□ 1.05
COL20A1-204ENST00000455906 SENP7Q9BQF6 1050 aa21.59■■□□□ 1.05
COL20A1-204ENST00000455906 LZTS2Q9BRK4 669 aa21.59■■□□□ 1.05
COL20A1-204ENST00000455906 LSG1Q9H089 658 aaKnown RBP21.59■■□□□ 1.05
COL20A1-204ENST00000455906 CAND2O75155 1236 aa21.58■■□□□ 1.05
COL20A1-204ENST00000455906 AMHP03971 560 aa21.58■■□□□ 1.05
COL20A1-204ENST00000455906 COL9A1P20849 921 aa21.58■■□□□ 1.05
COL20A1-204ENST00000455906 CASC1Q6TDU7 716 aa21.58■■□□□ 1.05
COL20A1-204ENST00000455906 CUL5Q93034 780 aa21.58■■□□□ 1.05
COL20A1-204ENST00000455906 SEC63Q9UGP8 760 aaKnown RBP21.58■■□□□ 1.05
COL20A1-204ENST00000455906 INSL6Q9Y581 213 aa21.58■■□□□ 1.05
COL20A1-204ENST00000455906 CTSHP09668 335 aa21.57■■□□□ 1.04
COL20A1-204ENST00000455906 UTP14CQ5TAP6 766 aaKnown RBP21.57■■□□□ 1.04
COL20A1-204ENST00000455906 MYOCDQ8IZQ8 938 aa21.57■■□□□ 1.04
COL20A1-204ENST00000455906 CMTR1Q8N1G2 835 aaKnown RBP21.57■■□□□ 1.04
COL20A1-204ENST00000455906 SP7Q8TDD2 431 aaPredicted RBP21.57■■□□□ 1.04
COL20A1-204ENST00000455906 TMEM87BQ96K49 555 aa21.57■■□□□ 1.04
COL20A1-204ENST00000455906 C17orf80Q9BSJ5 609 aa21.57■■□□□ 1.04
COL20A1-204ENST00000455906 GNAT1P11488 350 aa21.56■■□□□ 1.04
COL20A1-204ENST00000455906 RXRAP19793 462 aa21.56■■□□□ 1.04
COL20A1-204ENST00000455906 MCM5P33992 734 aa21.56■■□□□ 1.04
COL20A1-204ENST00000455906 GNAQP50148 359 aa21.56■■□□□ 1.04
COL20A1-204ENST00000455906 SP4Q02446 784 aa21.56■■□□□ 1.04
COL20A1-204ENST00000455906 TMTC2Q8N394 836 aa21.56■■□□□ 1.04
COL20A1-204ENST00000455906 LMBR1Q8WVP7 490 aa21.56■■□□□ 1.04
COL20A1-204ENST00000455906 SEPT8Q92599 483 aa21.56■■□□□ 1.04
COL20A1-204ENST00000455906 ZNF215Q9UL58 517 aaPredicted RBP21.56■■□□□ 1.04
COL20A1-204ENST00000455906 CCDC69A6NI79 296 aa21.55■■□□□ 1.04
COL20A1-204ENST00000455906 SLC27A2O14975 620 aa21.55■■□□□ 1.04
COL20A1-204ENST00000455906 ATP9AO75110 1047 aa21.55■■□□□ 1.04
COL20A1-204ENST00000455906 KCNA2P16389 499 aa21.55■■□□□ 1.04
COL20A1-204ENST00000455906 LIFRP42702 1097 aa21.55■■□□□ 1.04
COL20A1-204ENST00000455906 NFXL1Q6ZNB6 911 aa21.55■■□□□ 1.04
COL20A1-204ENST00000455906 NLRX1Q86UT6 975 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms