RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 TRANK1O15050 2925 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 STAM2O75886 525 aa13.73□□□□□ -0.21
PDGFB-204ENST00000455790 ITGB5P18084 799 aa13.73□□□□□ -0.21
PDGFB-204ENST00000455790 HOXC8P31273 242 aa13.73□□□□□ -0.21
PDGFB-204ENST00000455790 PTK7Q13308 1070 aa13.73□□□□□ -0.21
PDGFB-204ENST00000455790 MBTPS1Q14703 1052 aa13.73□□□□□ -0.21
PDGFB-204ENST00000455790 TSGA10IPQ3SY00 556 aa13.73□□□□□ -0.21
PDGFB-204ENST00000455790 ZNF618Q5T7W0 954 aa13.73□□□□□ -0.21
PDGFB-204ENST00000455790 DHX32Q7L7V1 743 aaKnown RBP13.73□□□□□ -0.21
PDGFB-204ENST00000455790 TMCO2Q7Z6W1 182 aaPredicted RBP13.73□□□□□ -0.21
PDGFB-204ENST00000455790 CCDC136Q96JN2 1154 aa13.73□□□□□ -0.21
PDGFB-204ENST00000455790 GPR20Q99678 358 aa13.73□□□□□ -0.21
PDGFB-204ENST00000455790 SLC28A3Q9HAS3 691 aa13.73□□□□□ -0.21
PDGFB-204ENST00000455790 FAM217BQ9NTX9 383 aaPredicted RBP13.73□□□□□ -0.21
PDGFB-204ENST00000455790 PCDHA11Q9Y5I1 949 aa13.73□□□□□ -0.21
PDGFB-204ENST00000455790 TRIP12Q14669 1992 aaPredicted RBP13.72□□□□□ -0.21
PDGFB-204ENST00000455790 KLF18A0A0U1RQI7 1052 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 H3BRB1 525 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 NOP56O00567 594 aaKnown RBP13.72□□□□□ -0.21
PDGFB-204ENST00000455790 ZBTB43O43298 467 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 ATP9AO75110 1047 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 CA3P07451 260 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 SMIM10L2AP0DMW4 78 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 SMIM10L2BP0DMW5 78 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 ACTN1P12814 892 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 CDC27P30260 824 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 NEDD9Q14511 834 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 RTN1Q16799 776 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 PPP2R2DQ66LE6 453 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 SERINC5Q86VE9 423 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 COL25A1Q9BXS0 654 aaPredicted RBP13.72□□□□□ -0.21
PDGFB-204ENST00000455790 TUT1Q9H6E5 874 aaKnown RBP13.72□□□□□ -0.21
PDGFB-204ENST00000455790 PRDM6Q9NQX0 595 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 PKD2L1Q9P0L9 805 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 PTPRSQ13332 1948 aa13.72□□□□□ -0.21
PDGFB-204ENST00000455790 C17orf102A2RUQ5 167 aa13.71□□□□□ -0.21
PDGFB-204ENST00000455790 GOLGA8AA7E2F4 631 aa13.71□□□□□ -0.21
PDGFB-204ENST00000455790 GOLGA8BA8MQT2 603 aa13.71□□□□□ -0.21
PDGFB-204ENST00000455790 CXCL10P02778 98 aa13.71□□□□□ -0.21
PDGFB-204ENST00000455790 KCNA2P16389 499 aa13.71□□□□□ -0.21
PDGFB-204ENST00000455790 WDR5P61964 334 aaKnown RBP13.71□□□□□ -0.21
PDGFB-204ENST00000455790 DEFB103AP81534 67 aa13.71□□□□□ -0.21
PDGFB-204ENST00000455790 UTP14CQ5TAP6 766 aaKnown RBP13.71□□□□□ -0.21
PDGFB-204ENST00000455790 XRRA1Q6P2D8 792 aa13.71□□□□□ -0.21
PDGFB-204ENST00000455790 SYNE3Q6ZMZ3 975 aa13.71□□□□□ -0.21
PDGFB-204ENST00000455790 SPRED2Q7Z698 418 aa13.71□□□□□ -0.21
PDGFB-204ENST00000455790 HERC6Q8IVU3 1022 aa13.71□□□□□ -0.21
PDGFB-204ENST00000455790 KCNB2Q92953 911 aa13.71□□□□□ -0.21
PDGFB-204ENST00000455790 PGBD1Q96JS3 809 aa13.71□□□□□ -0.21
PDGFB-204ENST00000455790 SLC9A7Q96T83 725 aa13.71□□□□□ -0.21
PDGFB-204ENST00000455790 GAS2L1Q99501 681 aaPredicted RBP13.71□□□□□ -0.21
PDGFB-204ENST00000455790 OSBPL7Q9BZF2 842 aa13.71□□□□□ -0.21
PDGFB-204ENST00000455790 RBM28Q9NW13 759 aaKnown RBP13.71□□□□□ -0.21
PDGFB-204ENST00000455790 XIRP2A4UGR9 3374 aa13.71□□□□□ -0.22
PDGFB-204ENST00000455790 EPOPA6NHQ4 379 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 STXBP3O00186 592 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 TREHO43280 583 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 BAIAP3O94812 1187 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 THPOP40225 353 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 NAPAP54920 295 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 KRT32Q14532 448 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 NLRX1Q86UT6 975 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 PPM1EQ8WY54 764 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 ATP6V0A1Q93050 837 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 GPRASP2Q96D09 838 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 JAKMIP1Q96N16 626 aaKnown RBP13.7□□□□□ -0.22
PDGFB-204ENST00000455790 SENP7Q9BQF6 1050 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 RNPEPQ9H4A4 650 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 CERS4Q9HA82 394 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 SETD4Q9NVD3 440 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 PCDHA6Q9UN73 950 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 PCDHA8Q9Y5H6 950 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 SNX14Q9Y5W7 946 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 UBIAD1Q9Y5Z9 338 aa13.7□□□□□ -0.22
PDGFB-204ENST00000455790 V9GY48 417 aaPredicted RBP13.7□□□□□ -0.22
PDGFB-204ENST00000455790 LCHNA4D1U4 455 aa13.69□□□□□ -0.22
PDGFB-204ENST00000455790 SPDYE3A6NKU9 549 aa13.69□□□□□ -0.22
PDGFB-204ENST00000455790 RFXAPO00287 272 aa13.69□□□□□ -0.22
PDGFB-204ENST00000455790 IGFBP4P22692 258 aa13.69□□□□□ -0.22
PDGFB-204ENST00000455790 HSPA4P34932 840 aa13.69□□□□□ -0.22
PDGFB-204ENST00000455790 KCNJ6P48051 423 aa13.69□□□□□ -0.22
PDGFB-204ENST00000455790 APOBRQ0VD83 1088 aa13.69□□□□□ -0.22
PDGFB-204ENST00000455790 CNKSR3Q6P9H4 555 aa13.69□□□□□ -0.22
PDGFB-204ENST00000455790 CYP2W1Q8TAV3 490 aa13.69□□□□□ -0.22
PDGFB-204ENST00000455790 PHOSPHO2Q8TCD6 241 aa13.69□□□□□ -0.22
PDGFB-204ENST00000455790 USP26Q9BXU7 913 aa13.69□□□□□ -0.22
PDGFB-204ENST00000455790 TMEM260Q9NX78 707 aa13.69□□□□□ -0.22
PDGFB-204ENST00000455790 NAP1L2Q9ULW6 460 aaPredicted RBP13.69□□□□□ -0.22
PDGFB-204ENST00000455790 GSTTP1A0A1W2PQM5 241 aa13.68□□□□□ -0.22
PDGFB-204ENST00000455790 ADAMTS3O15072 1205 aa13.68□□□□□ -0.22
PDGFB-204ENST00000455790 CTSHP09668 335 aa13.68□□□□□ -0.22
PDGFB-204ENST00000455790 ADD1P35611 737 aaKnown RBP13.68□□□□□ -0.22
PDGFB-204ENST00000455790 TCF7P36402 384 aaPredicted RBP13.68□□□□□ -0.22
PDGFB-204ENST00000455790 ADCY7P51828 1080 aa13.68□□□□□ -0.22
PDGFB-204ENST00000455790 TAP1Q03518 808 aa13.68□□□□□ -0.22
PDGFB-204ENST00000455790 MTMR1Q13613 665 aa13.68□□□□□ -0.22
PDGFB-204ENST00000455790 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
PDGFB-204ENST00000455790 PPP1R18Q6NYC8 613 aa13.68□□□□□ -0.22
PDGFB-204ENST00000455790 Q6ZUG5 572 aa13.68□□□□□ -0.22
PDGFB-204ENST00000455790 LMBR1Q8WVP7 490 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms