RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 FKBP3Q00688 224 aaKnown RBP13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 ARID5AQ03989 594 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 ICA1Q05084 483 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 KCNMA1Q12791 1236 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 ZNF662Q6ZS27 426 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 LSM14BQ9BX40 385 aaKnown RBP13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 GBP3Q9H0R5 595 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 SH2D4AQ9H788 454 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 ARFGEF1Q9Y6D6 1849 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 KDM3AQ9Y4C1 1321 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 CKAP4Q07065 602 aaKnown RBP13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 ZCWPW2Q504Y3 356 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 SH3BP5LQ7L8J4 393 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 COG1Q8WTW3 980 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 TSGA10Q9BZW7 698 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 NT5C3AQ9H0P0 336 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 FAM198AQ9UFP1 575 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 NCK2O43639 380 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 BUB1O43683 1085 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 TACC1O75410 805 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 HNRNPH3P31942 346 aaKnown RBP13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 MATR3P43243 847 aaKnown RBP eCLIP13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 MAGEA1P43355 309 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 NAP1L1P55209 391 aaKnown RBP13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 RASSF7Q02833 373 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 GPS2Q13227 327 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 PDXDC1Q6P996 788 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 KRT27Q7Z3Y8 459 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 CCDC65Q8IXS2 484 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 CCDC17Q96LX7 622 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 EHD2Q9NZN4 543 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 ADAM21Q9UKJ8 722 aa13.53□□□□□ -0.24
SEMA4D-213ENST00000455551 EIF3JO75822 258 aaKnown RBP13.52□□□□□ -0.24
SEMA4D-213ENST00000455551 CYP11B2P19099 503 aa13.52□□□□□ -0.24
SEMA4D-213ENST00000455551 LMAN1P49257 510 aa13.52□□□□□ -0.24
SEMA4D-213ENST00000455551 DNA2P51530 1060 aa13.52□□□□□ -0.24
SEMA4D-213ENST00000455551 PSMC6P62333 389 aa13.52□□□□□ -0.24
SEMA4D-213ENST00000455551 NFRKBQ6P4R8 1299 aa13.52□□□□□ -0.24
SEMA4D-213ENST00000455551 SALL4Q9UJQ4 1053 aa13.52□□□□□ -0.24
SEMA4D-213ENST00000455551 FAN1Q9Y2M0 1017 aa13.52□□□□□ -0.24
SEMA4D-213ENST00000455551 MEIS2O14770 477 aa13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 ALDH1B1P30837 517 aa13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 HOXA13P31271 388 aaPredicted RBP13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 POLR2FP61218 127 aaKnown RBP13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 PABPC4Q13310 644 aaKnown RBP eCLIP13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 TRIM58Q8NG06 486 aa13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 SCFD1Q8WVM8 642 aa13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 ANO9A1A5B4 782 aa13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 CCDC66A2RUB6 948 aa13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 ARHGAP4P98171 946 aa13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 CYP4A11Q02928 519 aa13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 WDR93Q6P2C0 686 aa13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 SIAH1Q8IUQ4 282 aa13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 SPICE1Q8N0Z3 855 aa13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 ZDHHC15Q96MV8 337 aa13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 KCNMB3Q9NPA1 279 aa13.52□□□□□ -0.25
SEMA4D-213ENST00000455551 HSPA1LP34931 641 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 CASP5P51878 434 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 SLC30A10Q6XR72 485 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 IQCDQ96DY2 449 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 EHD4Q9H223 541 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 PI4KBQ9UBF8 816 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 SNX12Q9UMY4 172 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 ABCB11O95342 1321 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 F5H6K3 240 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 MYBL2P10244 700 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 KLRC3Q07444 240 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 EZH2Q15910 746 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 ARSHQ5FYA8 562 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 NLGN1Q8N2Q7 840 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 EMILIN3Q9NT22 766 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 PCDHA2Q9Y5H9 948 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 FAM193AP78312 1265 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 RAPGEF1Q13905 1077 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 FAM83BQ5T0W9 1011 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 CATSPER3Q86XQ3 398 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 DCAF4Q8WV16 495 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 BCAS3Q9H6U6 928 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 JRKLQ9Y4A0 524 aa13.51□□□□□ -0.25
SEMA4D-213ENST00000455551 NOL4O94818 638 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 EPS15P42566 896 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 ADAM9Q13443 819 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 HYIQ5T013 277 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 CYP2W1Q8TAV3 490 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 MASTLQ96GX5 879 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 DHX36Q9H2U1 1008 aaKnown RBP13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 TDRD3Q9H7E2 651 aaKnown RBP13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 QSER1Q2KHR3 1735 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 FAM86B1E9PN63 330 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 ECE2O60344 883 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 TLR2O60603 784 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 NDUFB10O96000 172 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 FAM86B2P0C5J1 330 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 PDE6BP35913 854 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 USP11P51784 963 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 JAG1P78504 1218 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 HSP90B2PQ58FF3 399 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 HGSNATQ68CP4 663 aa13.5□□□□□ -0.25
SEMA4D-213ENST00000455551 SAMD1Q6SPF0 538 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms