RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 CIZ1Q9ULV3 898 aaPredicted RBP16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 SYNRGQ9UMZ2 1314 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 DNM1LO00429 736 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 SLC37A4O43826 429 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 PPFIA4O75335 1185 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 BRD1O95696 1058 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 TFRCP02786 760 aaKnown RBP16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 HOXD8P13378 290 aaPredicted RBP16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 TOB1P50616 345 aaPredicted RBP16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 KRT76Q01546 638 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 ITGB3BPQ13352 177 aaPredicted RBP16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 FSCN1Q16658 493 aaKnown RBP16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 ATL3Q6DD88 541 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 FERMT3Q86UX7 667 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 ATP6V1DQ9Y5K8 247 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 MOXD2PA6NHM9 499 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 NOP56O00567 594 aaKnown RBP16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 DHX15O43143 795 aaKnown RBP16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 MARCH6O60337 910 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 CABYRO75952 493 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 F13A1P00488 732 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 C6orf222P0C671 652 aaPredicted RBP16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 ATP2B1P20020 1258 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 LRRC41Q15345 812 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 CALCRLQ16602 461 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 GNASQ5JWF2 1037 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 TMEM63BQ5T3F8 832 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 ZNF746Q6NUN9 644 aaPredicted RBP16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 CYFIP1Q7L576 1253 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 COPS5Q92905 334 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 SPATA33Q96N06 139 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 MTMR9Q96QG7 549 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 POLR3EQ9NVU0 708 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 SLC9A2Q9UBY0 812 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 CEP131Q9UPN4 1083 aa16.18■□□□□ 0.18
HMGXB4-204ENST00000455359 LRRC37A2A6NM11 1700 aa16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 CTAGE5O15320 804 aa16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 GAS7O60861 476 aa16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 PSMD10O75832 226 aa16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 PGK1P00558 417 aa16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 MCM7P33993 719 aa16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 ZNF174Q15697 407 aa16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 DGKDQ16760 1214 aa16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 LRCH2Q5VUJ6 765 aa16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 ANO1Q5XXA6 986 aa16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 CCSAPQ6IQ19 270 aaPredicted RBP16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 SMAP1Q8IYB5 467 aaPredicted RBP16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 RDM1Q8NG50 284 aa16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 AFG1LQ8WV93 481 aa16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 SEPT1Q8WYJ6 367 aa16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 LENG1Q96BZ8 264 aaPredicted RBP16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 IPO9Q96P70 1041 aaKnown RBP16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 TEKT3Q9BXF9 490 aa16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 MORC2Q9Y6X9 1032 aaPredicted RBP16.17■□□□□ 0.18
HMGXB4-204ENST00000455359 KBTBD13C9JR72 458 aa16.16■□□□□ 0.18
HMGXB4-204ENST00000455359 MMP3P08254 477 aa16.16■□□□□ 0.18
HMGXB4-204ENST00000455359 OR52Z1P0C646 297 aa16.16■□□□□ 0.18
HMGXB4-204ENST00000455359 SFNP31947 248 aa16.16■□□□□ 0.18
HMGXB4-204ENST00000455359 PRPHP41219 470 aa16.16■□□□□ 0.18
HMGXB4-204ENST00000455359 GJC2Q5T442 439 aaPredicted RBP16.16■□□□□ 0.18
HMGXB4-204ENST00000455359 B3GNT9Q6UX72 402 aa16.16■□□□□ 0.18
HMGXB4-204ENST00000455359 HAS1Q92839 578 aa16.16■□□□□ 0.18
HMGXB4-204ENST00000455359 ZNF396Q96N95 335 aaPredicted RBP16.16■□□□□ 0.18
HMGXB4-204ENST00000455359 GPR20Q99678 358 aa16.16■□□□□ 0.18
HMGXB4-204ENST00000455359 SEZ6LQ9BYH1 1024 aa16.16■□□□□ 0.18
HMGXB4-204ENST00000455359 PHF24Q9UPV7 400 aa16.16■□□□□ 0.18
HMGXB4-204ENST00000455359 PCDHB6Q9Y5E3 794 aa16.16■□□□□ 0.18
HMGXB4-204ENST00000455359 KIAA0100Q14667 2235 aaKnown RBP16.16■□□□□ 0.18
HMGXB4-204ENST00000455359 POTEFA5A3E0 1075 aa16.15■□□□□ 0.18
HMGXB4-204ENST00000455359 WDR64B1ANS9 1081 aa16.15■□□□□ 0.18
HMGXB4-204ENST00000455359 WNT7AO00755 349 aa16.15■□□□□ 0.18
HMGXB4-204ENST00000455359 JAK3P52333 1124 aa16.15■□□□□ 0.18
HMGXB4-204ENST00000455359 PTGDRQ13258 359 aa16.15■□□□□ 0.18
HMGXB4-204ENST00000455359 PKP1Q13835 747 aa16.15■□□□□ 0.18
HMGXB4-204ENST00000455359 KCNA10Q16322 511 aa16.15■□□□□ 0.18
HMGXB4-204ENST00000455359 HSDL1Q3SXM5 330 aa16.15■□□□□ 0.18
HMGXB4-204ENST00000455359 ARL6IP4Q66PJ3 421 aaKnown RBP16.15■□□□□ 0.18
HMGXB4-204ENST00000455359 C4orf32Q8N8J7 132 aa16.15■□□□□ 0.18
HMGXB4-204ENST00000455359 PKD2L1Q9P0L9 805 aa16.15■□□□□ 0.18
HMGXB4-204ENST00000455359 PCDHA12Q9UN75 941 aa16.15■□□□□ 0.18
HMGXB4-204ENST00000455359 ELP1O95163 1332 aa16.14■□□□□ 0.17
HMGXB4-204ENST00000455359 ATG7O95352 703 aa16.14■□□□□ 0.17
HMGXB4-204ENST00000455359 SLC26A2P50443 739 aa16.14■□□□□ 0.17
HMGXB4-204ENST00000455359 ACLYP53396 1101 aa16.14■□□□□ 0.17
HMGXB4-204ENST00000455359 ACTR2P61160 394 aa16.14■□□□□ 0.17
HMGXB4-204ENST00000455359 ATP2C1P98194 919 aaPredicted RBP16.14■□□□□ 0.17
HMGXB4-204ENST00000455359 PPP2R5CQ13362 524 aa16.14■□□□□ 0.17
HMGXB4-204ENST00000455359 RAB34Q9BZG1 259 aa16.14■□□□□ 0.17
HMGXB4-204ENST00000455359 TMEM60Q9H2L4 133 aa16.14■□□□□ 0.17
HMGXB4-204ENST00000455359 BCAS3Q9H6U6 928 aa16.14■□□□□ 0.17
HMGXB4-204ENST00000455359 ZDHHC9Q9Y397 364 aa16.14■□□□□ 0.17
HMGXB4-204ENST00000455359 PCDHA10Q9Y5I2 948 aa16.14■□□□□ 0.17
HMGXB4-204ENST00000455359 STK24Q9Y6E0 443 aa16.14■□□□□ 0.17
HMGXB4-204ENST00000455359 MCM3APO60318 1980 aa16.13■□□□□ 0.17
HMGXB4-204ENST00000455359 GSTTP1A0A1W2PQM5 241 aa16.13■□□□□ 0.17
HMGXB4-204ENST00000455359 MYADML2A6NDP7 307 aa16.13■□□□□ 0.17
HMGXB4-204ENST00000455359 CCDC85CA6NKD9 419 aa16.13■□□□□ 0.17
HMGXB4-204ENST00000455359 CCNE2O96020 404 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms