RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 GAS7O60861 476 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 GNA14O95837 355 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 CCNE1P24864 410 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 ICAM3P32942 547 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 STAT3P40763 770 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 HMGCS2P54868 508 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 SNRPFP62306 86 aaKnown RBP7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 FANCCQ00597 558 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 GNPTABQ3T906 1256 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 KMT5BQ4FZB7 885 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 SMYD5Q6GMV2 418 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 ZNF746Q6NUN9 644 aaPredicted RBP7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 STXBP4Q6ZWJ1 553 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 VSIG10LQ86VR7 867 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 SMAP1Q8IYB5 467 aaPredicted RBP7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 KCNN1Q92952 543 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 HSD17B14Q9BPX1 270 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 ZNF577Q9BSK1 485 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 MROH8Q9H579 483 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 PXMP2Q9NR77 195 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 RNF146Q9NTX7 359 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 LIMA1Q9UHB6 759 aaKnown RBP7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 DBR1Q9UK59 544 aaKnown RBP7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 ODF2LQ9ULJ1 636 aa7.63□□□□□ -1.19
ECHDC1-210ENST00000454859 KIAA1217Q5T5P2 1943 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 SPDYE16A6NNV3 312 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 IPO5O00410 1097 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 BIN1O00499 593 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 CCP110O43303 1012 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 ALAS1P13196 640 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 ASIC1P78348 528 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 SNAPC2Q13487 334 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 ZYXQ15942 572 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 NFIL3Q16649 462 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 CENPPQ6IPU0 288 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 AGBL1Q96MI9 1066 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 CGNQ9P2M7 1197 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 NFE2L3Q9Y4A8 694 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 UTRNP46939 3433 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 A0A1B0GTH6 734 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 FOXN1O15353 648 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 SERPINC1P01008 464 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 P4HBP07237 508 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 PLA2G4BP0C869 781 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 ZBTB48P10074 688 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 TGFB3P10600 412 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 CDK11BP21127 795 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 GCLCP48506 637 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 UBASH3AP57075 661 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 RPS6P62753 249 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 PPP2R3AQ06190 1150 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 PDE4DQ08499 809 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 PGM5Q15124 567 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 TPD52L1Q16890 204 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 FCHSD1Q86WN1 690 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 ATG4CQ96DT6 458 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 CCDC51Q96ER9 411 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 CEP63Q96MT8 703 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 INPP4AQ96PE3 977 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 RMDN3Q96TC7 470 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 P2RX7Q99572 595 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 TSG101Q99816 390 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 PDCD2LQ9BRP1 358 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 HSD3B7Q9H2F3 369 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 RAVER2Q9HCJ3 691 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 AGO4Q9HCK5 861 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 OLFML3Q9NRN5 406 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 ANKEF1Q9NU02 776 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 COL4A3BPQ9Y5P4 624 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 ZNF236Q9UL36 1845 aa7.62□□□□□ -1.19
ECHDC1-210ENST00000454859 A0A1W2PQC6 194 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 POTEMA6NI47 508 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 EIF3DO15371 548 aaKnown RBP eCLIP7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 CETPP11597 493 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 GUCY2CP25092 1073 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 HOXA13P31271 388 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 CLCN1P35523 988 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 GTF2A2P52657 109 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 SLC12A3P55017 1021 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 CCNA1P78396 465 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 IRX3P78415 501 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 MYBPC2Q14324 1141 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 BMT2Q1RMZ1 405 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 EDRF1Q3B7T1 1238 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 ARHGEF16Q5VV41 709 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 SNRNP48Q6IEG0 339 aaKnown RBP7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 CATSPER3Q86XQ3 398 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 DRC7Q8IY82 874 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 EXOC8Q8IYI6 725 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 ABRAQ8N0Z2 381 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 RETREG2Q8NC44 543 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 NELFBQ8WX92 580 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 P2RX5Q93086 422 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 DNAJC19Q96DA6 116 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 EIF2AK1Q9BQI3 630 aaKnown RBP7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 ZSWIM4Q9H7M6 989 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 CYP39A1Q9NYL5 469 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 MAGEC2Q9UBF1 373 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 DAAM1Q9Y4D1 1078 aa7.61□□□□□ -1.19
ECHDC1-210ENST00000454859 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.61□□□□□ -1.191e-7■■■■□ 23.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms