RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, human

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-213	ENST00000454132	MYCN	P04198	464 aa	Predicted RBP	21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	ECHS1	P30084	290 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	DDR1	Q08345	913 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	C6orf89	Q6UWU4	347 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	TAF1	P21675	1872 aa		21.53	■■□□□ 1.04
LMBR1-213	ENST00000454132	KLRF2	D3W0D1	207 aa		21.53	■■□□□ 1.04
LMBR1-213	ENST00000454132	TSPY3	P0CV98	308 aa		21.53	■■□□□ 1.04
LMBR1-213	ENST00000454132	TSPY8	P0CW00	308 aa		21.53	■■□□□ 1.04
LMBR1-213	ENST00000454132	NONO	Q15233	471 aa	Known RBP eCLIP	21.53	■■□□□ 1.04	7e-7	■■■■□ 24.1
LMBR1-213	ENST00000454132	PARP9	Q8IXQ6	854 aa		21.53	■■□□□ 1.04
LMBR1-213	ENST00000454132	WHAMM	Q8TF30	809 aa		21.53	■■□□□ 1.04
LMBR1-213	ENST00000454132	LARP4B	Q92615	738 aa	Known RBP	21.53	■■□□□ 1.04
LMBR1-213	ENST00000454132	PNMA5	Q96PV4	448 aa		21.53	■■□□□ 1.04
LMBR1-213	ENST00000454132	TPX2	Q9ULW0	747 aa	Known RBP	21.53	■■□□□ 1.04
LMBR1-213	ENST00000454132	NPHP3-ACAD11	A0A0J9YXS1	232 aa		21.53	■■□□□ 1.04
LMBR1-213	ENST00000454132	TDP2	O95551	362 aa		21.53	■■□□□ 1.04
LMBR1-213	ENST00000454132	RPS6KA1	Q15418	735 aa		21.53	■■□□□ 1.04
LMBR1-213	ENST00000454132	CPLX4	Q7Z7G2	160 aa		21.53	■■□□□ 1.04
LMBR1-213	ENST00000454132	FUK	Q8N0W3	1084 aa		21.53	■■□□□ 1.04
LMBR1-213	ENST00000454132	RUBCN	Q92622	972 aa		21.53	■■□□□ 1.04
LMBR1-213	ENST00000454132		A6NNZ2	444 aa		21.52	■■□□□ 1.04
LMBR1-213	ENST00000454132	ELF1	P32519	619 aa		21.52	■■□□□ 1.04
LMBR1-213	ENST00000454132	TNNC1	P63316	161 aa		21.52	■■□□□ 1.04
LMBR1-213	ENST00000454132	TUBB8	Q3ZCM7	444 aa		21.52	■■□□□ 1.04
LMBR1-213	ENST00000454132	RNF10	Q8N5U6	811 aa	Known RBP	21.52	■■□□□ 1.04
LMBR1-213	ENST00000454132	UHMK1	Q8TAS1	419 aa	Known RBP	21.52	■■□□□ 1.04
LMBR1-213	ENST00000454132	NUP98	P52948	1817 aa		21.52	■■□□□ 1.04
LMBR1-213	ENST00000454132	SART1	O43290	800 aa	Known RBP	21.52	■■□□□ 1.04
LMBR1-213	ENST00000454132	SLC37A4	O43826	429 aa		21.52	■■□□□ 1.04
LMBR1-213	ENST00000454132	HSPA9	P38646	679 aa	Known RBP	21.52	■■□□□ 1.04
LMBR1-213	ENST00000454132	NEDD9	Q14511	834 aa		21.52	■■□□□ 1.04
LMBR1-213	ENST00000454132	SNCB	Q16143	134 aa		21.52	■■□□□ 1.04
LMBR1-213	ENST00000454132	KRT71	Q3SY84	523 aa		21.52	■■□□□ 1.04
LMBR1-213	ENST00000454132	SPATS2	Q86XZ4	545 aa	Known RBP	21.52	■■□□□ 1.04
LMBR1-213	ENST00000454132	GGT7	Q9UJ14	662 aa		21.52	■■□□□ 1.04
LMBR1-213	ENST00000454132	SERPING1	P05155	500 aa		21.52	■■□□□ 1.03
LMBR1-213	ENST00000454132	ECM1	Q16610	540 aa		21.52	■■□□□ 1.03
LMBR1-213	ENST00000454132	NEK8	Q86SG6	692 aa		21.52	■■□□□ 1.03
LMBR1-213	ENST00000454132	CELF1	Q92879	486 aa	Known RBP	21.52	■■□□□ 1.03
LMBR1-213	ENST00000454132	MCM8	Q9UJA3	840 aa		21.52	■■□□□ 1.03
LMBR1-213	ENST00000454132		H0YGN5	161 aa		21.51	■■□□□ 1.03
LMBR1-213	ENST00000454132	BYSL	Q13895	437 aa	Known RBP	21.51	■■□□□ 1.03
LMBR1-213	ENST00000454132	ANKRD20A8P	Q5CZ79	823 aa		21.51	■■□□□ 1.03
LMBR1-213	ENST00000454132	CD302	Q8IX05	232 aa		21.51	■■□□□ 1.03
LMBR1-213	ENST00000454132	ACSBG1	Q96GR2	724 aa		21.51	■■□□□ 1.03
LMBR1-213	ENST00000454132	ATP6V0A2	Q9Y487	856 aa		21.51	■■□□□ 1.03
LMBR1-213	ENST00000454132	NFS1	Q9Y697	457 aa		21.51	■■□□□ 1.03
LMBR1-213	ENST00000454132	TLDC2	A0PJX2	215 aa		21.51	■■□□□ 1.03
LMBR1-213	ENST00000454132	TTI1	O43156	1089 aa		21.51	■■□□□ 1.03
LMBR1-213	ENST00000454132	UNC13D	Q70J99	1090 aa		21.51	■■□□□ 1.03
LMBR1-213	ENST00000454132	SNX29	Q8TEQ0	813 aa		21.51	■■□□□ 1.03
LMBR1-213	ENST00000454132	TMEM47	Q9BQJ4	181 aa		21.51	■■□□□ 1.03
LMBR1-213	ENST00000454132	DONSON	Q9NYP3	566 aa		21.51	■■□□□ 1.03
LMBR1-213	ENST00000454132	SLC12A6	Q9UHW9	1150 aa		21.51	■■□□□ 1.03
LMBR1-213	ENST00000454132	ERVV-1	B6SEH8	477 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	SKAP2	O75563	359 aa	Predicted RBP	21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	SCTR	P47872	440 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	YTHDF3	Q7Z739	585 aa	Known RBP	21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	MREG	Q8N565	214 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	PIGS	Q96S52	555 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	ISCU	Q9H1K1	167 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	BAIAP2L1	Q9UHR4	511 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	COL5A2	P05997	1499 aa	Predicted RBP	21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	SSU72P8	A0A1W2PR75	194 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	TRAPPC3	O43617	180 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	ADAMTS2	O95450	1211 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	IL6ST	P40189	918 aa	Predicted RBP	21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	GRM4	Q14833	912 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	SLC18A3	Q16572	532 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	PPP4R3A	Q6IN85	833 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	ANKS1A	Q92625	1134 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	COA7	Q96BR5	231 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	TRIM51	Q9BSJ1	452 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	CUEDC2	Q9H467	287 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	PLCB1	Q9NQ66	1216 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	SH3GLB2	Q9NR46	395 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	TSKS	Q9UJT2	592 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	ATP8A1	Q9Y2Q0	1164 aa		21.5	■■□□□ 1.03
LMBR1-213	ENST00000454132	KRIT1	O00522	736 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	PDE6B	P35913	854 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	DHX9	Q08211	1270 aa	Known RBP	21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	PREPL	Q4J6C6	727 aa	Predicted RBP	21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	TXNRD3	Q86VQ6	643 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	GOPC	Q9HD26	462 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	COL4A3BP	Q9Y5P4	624 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	PLCH1	Q4KWH8	1693 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	PRPH	P41219	470 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	EPS15	P42566	896 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	PTK2	Q05397	1052 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	DIXDC1	Q155Q3	683 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	CALCRL	Q16602	461 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	ERFE	Q4G0M1	354 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	CACNA2D3	Q8IZS8	1091 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	AK8	Q96MA6	479 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	TSG101	Q99816	390 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	MINPP1	Q9UNW1	487 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	ZNF804B	A4D1E1	1349 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	PPP2R2A	P63151	447 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	IFFO1	Q0D2I5	559 aa		21.49	■■□□□ 1.03
LMBR1-213	ENST00000454132	PRPF4B	Q13523	1007 aa	Known RBP	21.49	■■□□□ 1.03

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