RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 ARP10275 920 aa16.52■□□□□ 0.24
TRAPPC12-211ENST00000452495 SP2Q02086 613 aa16.52■□□□□ 0.24
TRAPPC12-211ENST00000452495 LRRC41Q15345 812 aa16.52■□□□□ 0.24
TRAPPC12-211ENST00000452495 FSCN1Q16658 493 aaKnown RBP16.52■□□□□ 0.24
TRAPPC12-211ENST00000452495 TTC38Q5R3I4 469 aa16.52■□□□□ 0.24
TRAPPC12-211ENST00000452495 TMEM63BQ5T3F8 832 aa16.52■□□□□ 0.24
TRAPPC12-211ENST00000452495 MYSM1Q5VVJ2 828 aa16.52■□□□□ 0.24
TRAPPC12-211ENST00000452495 PCSK9Q8NBP7 692 aaKnown RBP16.52■□□□□ 0.24
TRAPPC12-211ENST00000452495 KLHDC9Q8NEP7 349 aa16.52■□□□□ 0.24
TRAPPC12-211ENST00000452495 PPTC7Q8NI37 304 aa16.52■□□□□ 0.24
TRAPPC12-211ENST00000452495 COPS5Q92905 334 aa16.52■□□□□ 0.24
TRAPPC12-211ENST00000452495 ZSCAN16Q9H4T2 348 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC12-211ENST00000452495 MLXIPQ9HAP2 919 aa16.52■□□□□ 0.24
TRAPPC12-211ENST00000452495 TSHZ2Q9NRE2 1034 aa16.52■□□□□ 0.24
TRAPPC12-211ENST00000452495 TCEAL9Q9UHQ7 104 aa16.52■□□□□ 0.24
TRAPPC12-211ENST00000452495 BRCA2P51587 3418 aa16.52■□□□□ 0.23
TRAPPC12-211ENST00000452495 POTEFA5A3E0 1075 aa16.51■□□□□ 0.23
TRAPPC12-211ENST00000452495 A6NJR5 290 aa16.51■□□□□ 0.23
TRAPPC12-211ENST00000452495 CCDC85CA6NKD9 419 aa16.51■□□□□ 0.23
TRAPPC12-211ENST00000452495 MSH4O15457 936 aa16.51■□□□□ 0.23
TRAPPC12-211ENST00000452495 SLC37A4O43826 429 aa16.51■□□□□ 0.23
TRAPPC12-211ENST00000452495 ZEB2O60315 1214 aa16.51■□□□□ 0.23
TRAPPC12-211ENST00000452495 ATP9AO75110 1047 aa16.51■□□□□ 0.23
TRAPPC12-211ENST00000452495 RESTQ13127 1097 aa16.51■□□□□ 0.23
TRAPPC12-211ENST00000452495 ETNPPLQ8TBG4 499 aa16.51■□□□□ 0.23
TRAPPC12-211ENST00000452495 RIT2Q99578 217 aa16.51■□□□□ 0.23
TRAPPC12-211ENST00000452495 TSEN34Q9BSV6 310 aaKnown RBP16.51■□□□□ 0.23
TRAPPC12-211ENST00000452495 JPH1Q9HDC5 661 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC12-211ENST00000452495 TBC1D22BQ9NU19 505 aa16.51■□□□□ 0.23
TRAPPC12-211ENST00000452495 DAXXQ9UER7 740 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC12-211ENST00000452495 MYADML2A6NDP7 307 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 MOXD2PA6NHM9 499 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 NOP56O00567 594 aaKnown RBP16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 CTAGE5O15320 804 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 MMP3P08254 477 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 HOXD8P13378 290 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 ITGB3BPQ13352 177 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 CYFIP1Q7L576 1253 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 FERMT3Q86UX7 667 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 SLFN12Q8IYM2 578 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 SLC5A5Q92911 643 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 FAM20AQ96MK3 541 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 SPATA33Q96N06 139 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 KCNMB3Q9NPA1 279 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 PKD2L1Q9P0L9 805 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 SLC9A2Q9UBY0 812 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 LOXHD1Q8IVV2 1947 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 ALPK3Q96L96 1907 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 KAT6AQ92794 2004 aa16.5■□□□□ 0.23
TRAPPC12-211ENST00000452495 WNT7AO00755 349 aa16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 KPNA6O60684 536 aa16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 GAS7O60861 476 aa16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 ZSCAN22P10073 491 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 PTGS1P23219 599 aa16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 TOB1P50616 345 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 KRT76Q01546 638 aa16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 CALCRLQ16602 461 aa16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 GNASQ5JWF2 1037 aa16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 LRCH2Q5VUJ6 765 aa16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 CCSAPQ6IQ19 270 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 AFG1LQ8WV93 481 aa16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 TEKT3Q9BXF9 490 aa16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 POLR3EQ9NVU0 708 aa16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 PHF24Q9UPV7 400 aa16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 TCHHQ07283 1943 aa16.49■□□□□ 0.23
TRAPPC12-211ENST00000452495 ELP1O95163 1332 aa16.48■□□□□ 0.23
TRAPPC12-211ENST00000452495 LAD1O00515 517 aa16.48■□□□□ 0.23
TRAPPC12-211ENST00000452495 DHX15O43143 795 aaKnown RBP16.48■□□□□ 0.23
TRAPPC12-211ENST00000452495 BAG4O95429 457 aaKnown RBP16.48■□□□□ 0.23
TRAPPC12-211ENST00000452495 F13A1P00488 732 aa16.48■□□□□ 0.23
TRAPPC12-211ENST00000452495 ATP2B1P20020 1258 aa16.48■□□□□ 0.23
TRAPPC12-211ENST00000452495 MCM7P33993 719 aa16.48■□□□□ 0.23
TRAPPC12-211ENST00000452495 SOX10P56693 466 aa16.48■□□□□ 0.23
TRAPPC12-211ENST00000452495 BEX3Q00994 111 aa16.48■□□□□ 0.23
TRAPPC12-211ENST00000452495 DGKDQ16760 1214 aa16.48■□□□□ 0.23
TRAPPC12-211ENST00000452495 HSDL1Q3SXM5 330 aa16.48■□□□□ 0.23
TRAPPC12-211ENST00000452495 ZNF746Q6NUN9 644 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC12-211ENST00000452495 GPR20Q99678 358 aa16.48■□□□□ 0.23
TRAPPC12-211ENST00000452495 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.48■□□□□ 0.23
TRAPPC12-211ENST00000452495 RBM19Q9Y4C8 960 aaKnown RBP16.48■□□□□ 0.23
TRAPPC12-211ENST00000452495 ARID2Q68CP9 1835 aa16.47■□□□□ 0.23
TRAPPC12-211ENST00000452495 MARCH6O60337 910 aa16.47■□□□□ 0.23
TRAPPC12-211ENST00000452495 SORBS3O60504 671 aa16.47■□□□□ 0.23
TRAPPC12-211ENST00000452495 PSMD10O75832 226 aa16.47■□□□□ 0.23
TRAPPC12-211ENST00000452495 CABYRO75952 493 aa16.47■□□□□ 0.23
TRAPPC12-211ENST00000452495 BMP15O95972 392 aa16.47■□□□□ 0.23
TRAPPC12-211ENST00000452495 OR52Z1P0C646 297 aa16.47■□□□□ 0.23
TRAPPC12-211ENST00000452495 EN2P19622 333 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC12-211ENST00000452495 MNX1P50219 401 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC12-211ENST00000452495 ACLYP53396 1101 aa16.47■□□□□ 0.23
TRAPPC12-211ENST00000452495 KCNA10Q16322 511 aa16.47■□□□□ 0.23
TRAPPC12-211ENST00000452495 SMAP1Q8IYB5 467 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC12-211ENST00000452495 PCDHB6Q9Y5E3 794 aa16.47■□□□□ 0.23
TRAPPC12-211ENST00000452495 EMSYQ7Z589 1322 aa16.46■□□□□ 0.23
TRAPPC12-211ENST00000452495 PPFIA4O75335 1185 aa16.46■□□□□ 0.23
TRAPPC12-211ENST00000452495 BRD1O95696 1058 aa16.46■□□□□ 0.23
TRAPPC12-211ENST00000452495 ASGR1P07306 291 aa16.46■□□□□ 0.23
TRAPPC12-211ENST00000452495 COL6A1P12109 1028 aa16.46■□□□□ 0.23
TRAPPC12-211ENST00000452495 SFNP31947 248 aa16.46■□□□□ 0.23
TRAPPC12-211ENST00000452495 DDIT3P35638 169 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms