RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 DAXXQ9UER7 740 aaPredicted RBP10.09□□□□□ -0.79
COL8A1-203ENST00000452013 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.09□□□□□ -0.79
COL8A1-203ENST00000452013 NFASCO94856 1347 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 DOCK3Q8IZD9 2030 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 CYP3A7-CYP3A51PA0A087WV96 503 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 FAM86B1E9PN63 330 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 H0YGN5 161 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 PQBP1O60828 265 aaKnown RBP10.08□□□□□ -0.8
COL8A1-203ENST00000452013 MMP1P03956 469 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 CLTBP09497 229 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 FAM86B2P0C5J1 330 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 HOXD8P13378 290 aaPredicted RBP10.08□□□□□ -0.8
COL8A1-203ENST00000452013 CYP3A7P24462 503 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 CHMP4BP1P59074 171 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 PSMC6P62333 389 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 NPY5RQ15761 445 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 NBPF20Q3BBV1 942 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 PRR16Q569H4 304 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 FAM47CQ5HY64 1035 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 NFRKBQ6P4R8 1299 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 MOXD1Q6UVY6 613 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 C7orf31Q8N865 590 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 TNPO1Q92973 898 aaKnown RBP10.08□□□□□ -0.8
COL8A1-203ENST00000452013 GPR20Q99678 358 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 LBHD1Q9BQE6 289 aaPredicted RBP10.08□□□□□ -0.8
COL8A1-203ENST00000452013 ZNF577Q9BSK1 485 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 BCAS3Q9H6U6 928 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 GJB4Q9NTQ9 266 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 PKD2L1Q9P0L9 805 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 SLC9A2Q9UBY0 812 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 TCEAL9Q9UHQ7 104 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 SMC3Q9UQE7 1217 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 HTTP42858 3142 aa10.08□□□□□ -0.8
COL8A1-203ENST00000452013 IGLV3-22A0A075B6J6 115 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 BTBD18B2RXH4 712 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 H3BRB1 525 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 IPO5O00410 1097 aaKnown RBP10.07□□□□□ -0.8
COL8A1-203ENST00000452013 GCFC2P16383 781 aaKnown RBP10.07□□□□□ -0.8
COL8A1-203ENST00000452013 PSEN2P49810 448 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 SP4Q02446 784 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 FAAP100Q0VG06 881 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 GNL2Q13823 731 aaKnown RBP10.07□□□□□ -0.8
COL8A1-203ENST00000452013 MFSD10Q14728 455 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 INF2Q27J81 1249 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 LETM2Q2VYF4 491 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 Q4G0T1 1027 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 UTP14CQ5TAP6 766 aaKnown RBP10.07□□□□□ -0.8
COL8A1-203ENST00000452013 PPP4R3AQ6IN85 833 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 PIK3AP1Q6ZUJ8 805 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 NEK8Q86SG6 692 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 DIS3L2Q8IYB7 885 aaKnown RBP10.07□□□□□ -0.8
COL8A1-203ENST00000452013 FBXO18Q8NFZ0 1043 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 OXER1Q8TDS5 423 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 KAT2BQ92831 832 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 SMARCAD1Q9H4L7 1026 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 TUT1Q9H6E5 874 aaKnown RBP10.07□□□□□ -0.8
COL8A1-203ENST00000452013 AZI2Q9H6S1 392 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 JPH1Q9HDC5 661 aaPredicted RBP10.07□□□□□ -0.8
COL8A1-203ENST00000452013 PRDM5Q9NQX1 630 aaPredicted RBP10.07□□□□□ -0.8
COL8A1-203ENST00000452013 ZNF215Q9UL58 517 aaPredicted RBP10.07□□□□□ -0.8
COL8A1-203ENST00000452013 ZMYND8Q9ULU4 1186 aaPredicted RBP10.07□□□□□ -0.8
COL8A1-203ENST00000452013 GRIN2DO15399 1336 aa10.07□□□□□ -0.8
COL8A1-203ENST00000452013 GSTTP1A0A1W2PQM5 241 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 HAS3O00219 553 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 KIAA0355O15063 1070 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 MARCH6O60337 910 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 CD2BP2O95400 341 aaKnown RBP10.06□□□□□ -0.8
COL8A1-203ENST00000452013 BAG4O95429 457 aaKnown RBP10.06□□□□□ -0.8
COL8A1-203ENST00000452013 F2P00734 622 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 CD4P01730 458 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 LGALS2P05162 132 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 GNAT1P11488 350 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 RAG1P15918 1043 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 SYN1P17600 705 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 TCF7P36402 384 aaPredicted RBP10.06□□□□□ -0.8
COL8A1-203ENST00000452013 FOSBP53539 338 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 GUCY1B3Q02153 619 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 NR5A1Q13285 461 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 KIAA0753Q2KHM9 967 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 SESTD1Q86VW0 696 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 FAM126BQ8IXS8 530 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 GLG1Q92896 1179 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 RIT2Q99578 217 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 C16orf70Q9BSU1 422 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 FOXP1Q9H334 677 aaPredicted RBP10.06□□□□□ -0.8
COL8A1-203ENST00000452013 DDX25Q9UHL0 483 aaKnown RBP10.06□□□□□ -0.8
COL8A1-203ENST00000452013 NOD1Q9Y239 953 aa10.06□□□□□ -0.8
COL8A1-203ENST00000452013 H3BQV1 296 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 MSH4O15457 936 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 DHX15O43143 795 aaKnown RBP10.05□□□□□ -0.8
COL8A1-203ENST00000452013 EDIL3O43854 480 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 CCNT1O60563 726 aaKnown RBP10.05□□□□□ -0.8
COL8A1-203ENST00000452013 ATG7O95352 703 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 ZNF286BP0CG31 522 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 GJB2P29033 226 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 STAT5BP51692 787 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 ACTR2P61160 394 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 KRT76Q01546 638 aa10.05□□□□□ -0.8
COL8A1-203ENST00000452013 ITGB3BPQ13352 177 aaPredicted RBP10.05□□□□□ -0.8
COL8A1-203ENST00000452013 CUL4AQ13619 759 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms