RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 DOCK5Q9H7D0 1870 aa31.28■■■□□ 2.6
USP42-204ENST00000451154 THEGQ9P2T0 379 aa31.28■■■□□ 2.6
USP42-204ENST00000451154 NOP56O00567 594 aaKnown RBP31.27■■■□□ 2.6
USP42-204ENST00000451154 LGALS2P05162 132 aa31.27■■■□□ 2.6
USP42-204ENST00000451154 GNAQP50148 359 aa31.27■■■□□ 2.6
USP42-204ENST00000451154 DEFB103AP81534 67 aa31.27■■■□□ 2.6
USP42-204ENST00000451154 NEDD9Q14511 834 aa31.27■■■□□ 2.6
USP42-204ENST00000451154 MBTPS1Q14703 1052 aa31.27■■■□□ 2.6
USP42-204ENST00000451154 NECTIN1Q15223 517 aa31.27■■■□□ 2.6
USP42-204ENST00000451154 SKAP1Q86WV1 359 aa31.27■■■□□ 2.6
USP42-204ENST00000451154 SERINC5Q86VE9 423 aa31.26■■■□□ 2.59
USP42-204ENST00000451154 ASB2Q96Q27 587 aa31.26■■■□□ 2.59
USP42-204ENST00000451154 ZBED2Q9BTP6 218 aa31.26■■■□□ 2.59
USP42-204ENST00000451154 ANO2Q9NQ90 1003 aa31.26■■■□□ 2.59
USP42-204ENST00000451154 TELO2Q9Y4R8 837 aa31.26■■■□□ 2.59
USP42-204ENST00000451154 hCG_1642624A0A1W2PR95 340 aa31.25■■■□□ 2.59
USP42-204ENST00000451154 C17orf102A2RUQ5 167 aa31.25■■■□□ 2.59
USP42-204ENST00000451154 PIK3CDO00329 1044 aa31.25■■■□□ 2.59
USP42-204ENST00000451154 FIBPO43427 364 aa31.25■■■□□ 2.59
USP42-204ENST00000451154 SMIM10L2AP0DMW4 78 aa31.25■■■□□ 2.59
USP42-204ENST00000451154 SMIM10L2BP0DMW5 78 aa31.25■■■□□ 2.59
USP42-204ENST00000451154 THPOP40225 353 aa31.25■■■□□ 2.59
USP42-204ENST00000451154 LIFRP42702 1097 aa31.25■■■□□ 2.59
USP42-204ENST00000451154 METTL7BQ6UX53 244 aa31.25■■■□□ 2.59
USP42-204ENST00000451154 SPRED2Q7Z698 418 aa31.25■■■□□ 2.59
USP42-204ENST00000451154 CCDC82Q8N4S0 544 aa31.25■■■□□ 2.59
USP42-204ENST00000451154 ATP6V0A1Q93050 837 aa31.25■■■□□ 2.59
USP42-204ENST00000451154 GPR20Q99678 358 aa31.25■■■□□ 2.59
USP42-204ENST00000451154 MTCH2Q9Y6C9 303 aa31.25■■■□□ 2.59
USP42-204ENST00000451154 ABHD14A-ACY1A0A1B0GW23 586 aa31.24■■■□□ 2.59
USP42-204ENST00000451154 LCHNA4D1U4 455 aa31.24■■■□□ 2.59
USP42-204ENST00000451154 MRPS5P82675 430 aaKnown RBP31.24■■■□□ 2.59
USP42-204ENST00000451154 IKBKEQ14164 716 aa31.24■■■□□ 2.59
USP42-204ENST00000451154 PCNX4Q63HM2 1172 aa31.24■■■□□ 2.59
USP42-204ENST00000451154 USP26Q9BXU7 913 aa31.24■■■□□ 2.59
USP42-204ENST00000451154 RNPEPQ9H4A4 650 aa31.24■■■□□ 2.59
USP42-204ENST00000451154 TREHO43280 583 aa31.23■■■□□ 2.59
USP42-204ENST00000451154 CALM1P0DP23 149 aa31.23■■■□□ 2.59
USP42-204ENST00000451154 CALM2P0DP24 149 aa31.23■■■□□ 2.59
USP42-204ENST00000451154 CALM3P0DP25 149 aa31.23■■■□□ 2.59
USP42-204ENST00000451154 KRT40Q6A162 431 aa31.23■■■□□ 2.59
USP42-204ENST00000451154 PSTPIP2Q9H939 334 aa31.23■■■□□ 2.59
USP42-204ENST00000451154 SLC12A7Q9Y666 1083 aa31.23■■■□□ 2.59
USP42-204ENST00000451154 MUC3AQ02505 3323 aa31.23■■■□□ 2.59
USP42-204ENST00000451154 XIRP2A4UGR9 3374 aa31.22■■■□□ 2.59
USP42-204ENST00000451154 RSPH10B2B2RC85 870 aa31.22■■■□□ 2.59
USP42-204ENST00000451154 GTPBP6O43824 516 aaPredicted RBP31.22■■■□□ 2.59
USP42-204ENST00000451154 RSPH10BP0C881 870 aa31.22■■■□□ 2.59
USP42-204ENST00000451154 POU3F3P20264 500 aaPredicted RBP31.22■■■□□ 2.59
USP42-204ENST00000451154 SP4Q02446 784 aa31.22■■■□□ 2.59
USP42-204ENST00000451154 XRRA1Q6P2D8 792 aa31.22■■■□□ 2.59
USP42-204ENST00000451154 FANCBQ8NB91 859 aa31.22■■■□□ 2.59
USP42-204ENST00000451154 LGR5O75473 907 aa31.21■■■□□ 2.59
USP42-204ENST00000451154 HOXC8P31273 242 aa31.21■■■□□ 2.59
USP42-204ENST00000451154 UTP14CQ5TAP6 766 aaKnown RBP31.21■■■□□ 2.59
USP42-204ENST00000451154 TRIM50Q86XT4 487 aa31.21■■■□□ 2.59
USP42-204ENST00000451154 TSPYL2Q9H2G4 693 aaPredicted RBP31.21■■■□□ 2.59
USP42-204ENST00000451154 SETD4Q9NVD3 440 aa31.21■■■□□ 2.59
USP42-204ENST00000451154 NCOR1O75376 2440 aa31.2■■■□□ 2.59
USP42-204ENST00000451154 SKIV2LQ15477 1246 aaKnown RBP31.2■■■□□ 2.59
USP42-204ENST00000451154 FAM117BQ6P1L5 589 aa31.2■■■□□ 2.59
USP42-204ENST00000451154 NLRX1Q86UT6 975 aa31.2■■■□□ 2.59
USP42-204ENST00000451154 SENP7Q9BQF6 1050 aa31.2■■■□□ 2.59
USP42-204ENST00000451154 GJB5O95377 273 aa31.19■■■□□ 2.58
USP42-204ENST00000451154 LIN28BQ6ZN17 250 aaKnown RBP eCLIP31.19■■■□□ 2.58
USP42-204ENST00000451154 DBF4BQ8NFT6 615 aa31.19■■■□□ 2.58
USP42-204ENST00000451154 RAD9AQ99638 391 aa31.19■■■□□ 2.58
USP42-204ENST00000451154 KAT6AQ92794 2004 aa31.19■■■□□ 2.58
USP42-204ENST00000451154 EFCAB14O75071 495 aa31.18■■■□□ 2.58
USP42-204ENST00000451154 ATP9AO75110 1047 aa31.18■■■□□ 2.58
USP42-204ENST00000451154 GRB10Q13322 594 aa31.18■■■□□ 2.58
USP42-204ENST00000451154 UBE2SQ16763 222 aa31.18■■■□□ 2.58
USP42-204ENST00000451154 TMTC3Q6ZXV5 915 aa31.18■■■□□ 2.58
USP42-204ENST00000451154 EMSYQ7Z589 1322 aa31.18■■■□□ 2.58
USP42-204ENST00000451154 BMP2KLQ5H9B9 411 aa31.17■■■□□ 2.58
USP42-204ENST00000451154 MICU3Q86XE3 530 aa31.17■■■□□ 2.58
USP42-204ENST00000451154 TCF20Q9UGU0 1960 aaKnown RBP31.17■■■□□ 2.58
USP42-204ENST00000451154 TNFRSF10AO00220 468 aa31.16■■■□□ 2.58
USP42-204ENST00000451154 GNAT1P11488 350 aa31.16■■■□□ 2.58
USP42-204ENST00000451154 ITGB5P18084 799 aa31.16■■■□□ 2.58
USP42-204ENST00000451154 TFF2Q03403 129 aa31.16■■■□□ 2.58
USP42-204ENST00000451154 SGMS1Q86VZ5 419 aa31.16■■■□□ 2.58
USP42-204ENST00000451154 ADAMTS19Q8TE59 1207 aa31.16■■■□□ 2.58
USP42-204ENST00000451154 OSBPL7Q9BZF2 842 aa31.16■■■□□ 2.58
USP42-204ENST00000451154 ZNF215Q9UL58 517 aaPredicted RBP31.16■■■□□ 2.58
USP42-204ENST00000451154 LPXNO60711 386 aa31.15■■■□□ 2.58
USP42-204ENST00000451154 CTSHP09668 335 aa31.15■■■□□ 2.58
USP42-204ENST00000451154 SYNE3Q6ZMZ3 975 aa31.15■■■□□ 2.58
USP42-204ENST00000451154 HEATR3Q7Z4Q2 680 aa31.15■■■□□ 2.58
USP42-204ENST00000451154 GIMAP8Q8ND71 665 aaPredicted RBP31.15■■■□□ 2.58
USP42-204ENST00000451154 GPRASP2Q96D09 838 aa31.15■■■□□ 2.58
USP42-204ENST00000451154 KCNA2P16389 499 aa31.14■■■□□ 2.58
USP42-204ENST00000451154 ARHGAP4P98171 946 aa31.14■■■□□ 2.58
USP42-204ENST00000451154 PLEKHG4Q58EX7 1191 aa31.14■■■□□ 2.58
USP42-204ENST00000451154 RNF20Q5VTR2 975 aa31.14■■■□□ 2.58
USP42-204ENST00000451154 IL27Q8NEV9 243 aa31.14■■■□□ 2.58
USP42-204ENST00000451154 TCEANC2Q96MN5 208 aa31.14■■■□□ 2.58
USP42-204ENST00000451154 NEK1Q96PY6 1258 aa31.14■■■□□ 2.58
USP42-204ENST00000451154 MTUS1Q9ULD2 1270 aa31.14■■■□□ 2.58
USP42-204ENST00000451154 PCDHA6Q9UN73 950 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms