RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 CDHR2Q9BYE9 1310 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 KRT10P13645 584 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 ARMCX2Q7L311 632 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 POTEDQ86YR6 584 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 SYNE4Q8N205 404 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 C7orf31Q8N865 590 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 CD209Q9NNX6 404 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 NXF1Q9UBU9 619 aaKnown RBP11.07□□□□□ -0.64
SCN10A-201ENST00000449082 USP17L5A8MUK1 530 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 S100BP04271 92 aaPredicted RBP11.07□□□□□ -0.64
SCN10A-201ENST00000449082 CASP14P31944 242 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 TBC1D9BQ66K14 1250 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 RYBPQ8N488 228 aaPredicted RBP11.07□□□□□ -0.64
SCN10A-201ENST00000449082 SKA2Q8WVK7 121 aaPredicted RBP11.07□□□□□ -0.64
SCN10A-201ENST00000449082 IKBKBO14920 756 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 SRGAP2CP0DJJ0 459 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 RASSF2P50749 326 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 SATB1Q01826 763 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 STXBP2Q15833 593 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 ARL6IP4Q66PJ3 421 aaKnown RBP11.07□□□□□ -0.64
SCN10A-201ENST00000449082 LINC00301Q8NCQ3 95 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 KIF9Q9HAQ2 790 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 RWDD2AQ9UIY3 292 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 SGK1O00141 431 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 ARL4AP40617 200 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 ARHGAP25P42331 645 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 EEF2KMTQ96G04 330 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 GCNAQ96QF7 691 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.07□□□□□ -0.64
SCN10A-201ENST00000449082 PLA2R1Q13018 1463 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 K7ERI5 159 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 MARK3P27448 753 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 ELF1P32519 619 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 EHHADHQ08426 723 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 FAM167AQ96KS9 214 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 MAN1B1Q9UKM7 699 aa11.07□□□□□ -0.64
SCN10A-201ENST00000449082 KDM6BO15054 1643 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 PLCG1P19174 1290 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 INPP5BP32019 993 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 SNAP25P60880 206 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 NXNQ6DKJ4 435 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 ZNF449Q6P9G9 518 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 SIX6OS1Q8N1H7 587 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 TDRD3Q9H7E2 651 aaKnown RBP11.06□□□□□ -0.64
SCN10A-201ENST00000449082 GCNT4Q9P109 453 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 ZHX2Q9Y6X8 837 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 COBLO75128 1261 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 OSTNP61366 133 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 PKP1Q13835 747 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 DNAJC24Q6P3W2 148 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 CAPN12Q6ZSI9 719 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 WRNIP1Q96S55 665 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 UBE2TQ9NPD8 197 aaPredicted RBP11.06□□□□□ -0.64
SCN10A-201ENST00000449082 PHLPP2Q6ZVD8 1323 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 GOLGA8KD6RF30 607 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 GOLGA8SH3BPF8 625 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 LDHAP00338 332 aaKnown RBP11.06□□□□□ -0.64
SCN10A-201ENST00000449082 SAT1P21673 171 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 ECE1P42892 770 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 MXI1P50539 228 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 GTF2A1P52655 376 aaPredicted RBP11.06□□□□□ -0.64
SCN10A-201ENST00000449082 FAM83BQ5T0W9 1011 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 ARHGEF1Q92888 912 aaKnown RBP11.06□□□□□ -0.64
SCN10A-201ENST00000449082 NLRP4Q96MN2 994 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 MSTO1Q9BUK6 570 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 THAP9Q9H5L6 903 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 CDC25BP30305 580 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 YWHAGP61981 247 aaKnown RBP eCLIP11.06□□□□□ -0.64
SCN10A-201ENST00000449082 CTTNQ14247 550 aaKnown RBP11.06□□□□□ -0.64
SCN10A-201ENST00000449082 DSTYKQ6XUX3 929 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 PPP4R3CPQ6ZMV5 832 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 PPP1R16BQ96T49 567 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 ZBTB5O15062 677 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 LRRN2O75325 713 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 CACNB3P54284 484 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 TAB3Q8N5C8 712 aaPredicted RBP11.06□□□□□ -0.64
SCN10A-201ENST00000449082 GPT2Q8TD30 523 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 RCOR1Q9UKL0 485 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 PCDHA6Q9UN73 950 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 PCDHA8Q9Y5H6 950 aa11.06□□□□□ -0.64
SCN10A-201ENST00000449082 CYP19A1P11511 503 aaPredicted RBP11.05□□□□□ -0.64
SCN10A-201ENST00000449082 CCNE1P24864 410 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 SMYD4Q8IYR2 804 aaPredicted RBP11.05□□□□□ -0.64
SCN10A-201ENST00000449082 ARHGAP4P98171 946 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 RNF139Q8WU17 664 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 TTC1Q99614 292 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 HEXIM1O94992 359 aaKnown RBP11.05□□□□□ -0.64
SCN10A-201ENST00000449082 OAS2P29728 719 aaKnown RBP11.05□□□□□ -0.64
SCN10A-201ENST00000449082 DDIT3P35638 169 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 ETF1P62495 437 aaKnown RBP11.05□□□□□ -0.64
SCN10A-201ENST00000449082 PPARDQ03181 441 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 MTMR1Q13613 665 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 C10orf76Q5T2E6 689 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 OR6B2Q6IFH4 312 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 CATSPER4Q7RTX7 472 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 ANKRD13CQ8N6S4 541 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 CCNYQ8ND76 341 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 MAGOHBQ96A72 148 aaKnown RBP11.05□□□□□ -0.64
SCN10A-201ENST00000449082 GDAP1L1Q96MZ0 367 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 MCF2LO15068 1137 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms