RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 ZIM3Q96PE6 472 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 TMEM260Q9NX78 707 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 PCDHA1Q9Y5I3 950 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 PDS5AQ29RF7 1337 aaKnown RBP12.25□□□□□ -0.45
ZNF550-204ENST00000447310 SPATA31A3Q5VYP0 1347 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 GMNCA6NCL1 334 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 PLA2G4BP0C869 781 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 MAGOHP61326 146 aaKnown RBP12.25□□□□□ -0.45
ZNF550-204ENST00000447310 TMEM139Q8IV31 216 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 N4BP2L2Q92802 583 aaPredicted RBP12.25□□□□□ -0.45
ZNF550-204ENST00000447310 C8orf37Q96NL8 207 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 ACTR5Q9H9F9 607 aaPredicted RBP12.25□□□□□ -0.45
ZNF550-204ENST00000447310 BARHL2Q9NY43 387 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 PARP2Q9UGN5 583 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 MINPP1Q9UNW1 487 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 CAPN6Q9Y6Q1 641 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 PVALEFA0A1B0GWK0 134 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 DDX39AO00148 427 aaKnown RBP12.25□□□□□ -0.45
ZNF550-204ENST00000447310 LRRN2O75325 713 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 CFBP00751 764 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 HERVK_113P62684 666 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 GTF2IP78347 998 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 MESDQ14696 234 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 PROCA1Q8NCQ7 364 aaPredicted RBP12.25□□□□□ -0.45
ZNF550-204ENST00000447310 PCDHA6Q9UN73 950 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 PCDHA8Q9Y5H6 950 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 RIMS1Q86UR5 1692 aaKnown RBP12.25□□□□□ -0.45
ZNF550-204ENST00000447310 ABL1P00519 1130 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 ADCY1Q08828 1119 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 TRAF1Q13077 416 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 ZKSCAN8Q15776 578 aaPredicted RBP12.25□□□□□ -0.45
ZNF550-204ENST00000447310 ARL8AQ96BM9 186 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 CCT8L2Q96SF2 557 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 DNAJC7Q99615 494 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 TAF1DQ9H5J8 278 aaPredicted RBP12.25□□□□□ -0.45
ZNF550-204ENST00000447310 BSDC1Q9NW68 430 aaPredicted RBP12.25□□□□□ -0.45
ZNF550-204ENST00000447310 GCNT4Q9P109 453 aa12.25□□□□□ -0.45
ZNF550-204ENST00000447310 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.25□□□□□ -0.45
ZNF550-204ENST00000447310 OVOS2A0A0G2JMS6 1433 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 SIGLEC1Q9BZZ2 1709 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 CNTNAP5Q8WYK1 1306 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 LOC102724159A0A0B4J2E5 919 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 FAM237AA0A1B0GTK4 181 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 FERP16591 822 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 PWP2Q15269 919 aaKnown RBP12.24□□□□□ -0.45
ZNF550-204ENST00000447310 PAPD7Q5XG87 772 aaKnown RBP12.24□□□□□ -0.45
ZNF550-204ENST00000447310 PDXDC1Q6P996 788 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 BANK1Q8NDB2 785 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 IQCGQ9H095 443 aaKnown RBP12.24□□□□□ -0.45
ZNF550-204ENST00000447310 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.24□□□□□ -0.45
ZNF550-204ENST00000447310 GUCY2CP25092 1073 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 SH3RF3Q8TEJ3 882 aaPredicted RBP12.24□□□□□ -0.45
ZNF550-204ENST00000447310 CELF1Q92879 486 aaKnown RBP12.24□□□□□ -0.45
ZNF550-204ENST00000447310 KLHL14Q9P2G3 628 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 AGLP35573 1532 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 ORC4O43929 436 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 PRPF6O94906 941 aaKnown RBP12.24□□□□□ -0.45
ZNF550-204ENST00000447310 KRT15P19012 456 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 LSP1P33241 339 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 KCNH2Q12809 1159 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 KCTD1Q719H9 257 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 FAM178BQ8IXR5 827 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 NEK9Q8TD19 979 aa12.24□□□□□ -0.45
ZNF550-204ENST00000447310 ZNF622Q969S3 477 aaKnown RBP eCLIP12.24□□□□□ -0.45
ZNF550-204ENST00000447310 FAM84BQ96KN1 310 aaPredicted RBP12.24□□□□□ -0.45
ZNF550-204ENST00000447310 CDK8P49336 464 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 CLUL1Q15846 466 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 ARMC9Q7Z3E5 817 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 TBC1D1Q86TI0 1168 aaPredicted RBP12.23□□□□□ -0.45
ZNF550-204ENST00000447310 MMGT1Q8N4V1 131 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 SNX24Q9Y343 169 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 E9PMD0 336 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 CCDC188H7C350 402 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 TDP2O95551 362 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 MXRA7P84157 204 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 C6orf163Q5TEZ5 329 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 OR2W6PQ8NHA6 318 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 ELAC2Q9BQ52 826 aaKnown RBP12.23□□□□□ -0.45
ZNF550-204ENST00000447310 PPP1R12CQ9BZL4 782 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 AMACRQ9UHK6 382 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 KDM6AO15550 1401 aaPredicted RBP12.23□□□□□ -0.45
ZNF550-204ENST00000447310 GAS8O95995 478 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 LMNB1P20700 586 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 GCKP35557 465 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 PEX19P40855 299 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 MDH1P40925 334 aaKnown RBP12.23□□□□□ -0.45
ZNF550-204ENST00000447310 PMS1P54277 932 aaKnown RBP12.23□□□□□ -0.45
ZNF550-204ENST00000447310 GRM4Q14833 912 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 FAM186BQ8IYM0 893 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 SLFN12Q8IYM2 578 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 NBPF3Q9H094 633 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 EPN3Q9H201 632 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 HOMER2Q9NSB8 354 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 FBXL5Q9UKA1 691 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 PLAGL2Q9UPG8 496 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 USTQ9Y2C2 406 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 DR1Q01658 176 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 COASYQ13057 564 aa12.23□□□□□ -0.45
ZNF550-204ENST00000447310 UAP1Q16222 522 aaPredicted RBP12.23□□□□□ -0.45
ZNF550-204ENST00000447310 PKN1Q16512 942 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms