RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 NPY5RQ15761 445 aa16.93■□□□□ 0.3
HDAC4-204ENST00000446876 METTL7BQ6UX53 244 aa16.93■□□□□ 0.3
HDAC4-204ENST00000446876 BICD2Q8TD16 824 aa16.93■□□□□ 0.3
HDAC4-204ENST00000446876 CRYGNQ8WXF5 182 aa16.93■□□□□ 0.3
HDAC4-204ENST00000446876 UIMC1Q96RL1 719 aa16.93■□□□□ 0.3
HDAC4-204ENST00000446876 ALG1Q9BT22 464 aa16.93■□□□□ 0.3
HDAC4-204ENST00000446876 ORC3Q9UBD5 711 aaPredicted RBP16.93■□□□□ 0.3
HDAC4-204ENST00000446876 TRIP12Q14669 1992 aaPredicted RBP16.93■□□□□ 0.3
HDAC4-204ENST00000446876 UMODL1Q5DID0 1318 aa16.93■□□□□ 0.3
HDAC4-204ENST00000446876 NOP56O00567 594 aaKnown RBP16.92■□□□□ 0.3
HDAC4-204ENST00000446876 F2P00734 622 aa16.92■□□□□ 0.3
HDAC4-204ENST00000446876 CYP2C9P11712 490 aa16.92■□□□□ 0.3
HDAC4-204ENST00000446876 FDPSP14324 419 aaKnown RBP16.92■□□□□ 0.3
HDAC4-204ENST00000446876 ZNF76P36508 570 aa16.92■□□□□ 0.3
HDAC4-204ENST00000446876 FOSBP53539 338 aa16.92■□□□□ 0.3
HDAC4-204ENST00000446876 MFSD10Q14728 455 aa16.92■□□□□ 0.3
HDAC4-204ENST00000446876 CEP55Q53EZ4 464 aa16.92■□□□□ 0.3
HDAC4-204ENST00000446876 TRIM50Q86XT4 487 aa16.92■□□□□ 0.3
HDAC4-204ENST00000446876 NSUN7Q8NE18 718 aaKnown RBP16.92■□□□□ 0.3
HDAC4-204ENST00000446876 CDHR1Q96JP9 859 aa16.92■□□□□ 0.3
HDAC4-204ENST00000446876 GPR20Q99678 358 aa16.92■□□□□ 0.3
HDAC4-204ENST00000446876 SENP7Q9BQF6 1050 aa16.92■□□□□ 0.3
HDAC4-204ENST00000446876 KCNH7Q9NS40 1196 aa16.92■□□□□ 0.3
HDAC4-204ENST00000446876 PCDHA4Q9UN74 947 aa16.92■□□□□ 0.3
HDAC4-204ENST00000446876 FAM86B1E9PN63 330 aa16.91■□□□□ 0.3
HDAC4-204ENST00000446876 LGALS2P05162 132 aa16.91■□□□□ 0.3
HDAC4-204ENST00000446876 FAM86B2P0C5J1 330 aa16.91■□□□□ 0.3
HDAC4-204ENST00000446876 BMP8BP34820 402 aa16.91■□□□□ 0.3
HDAC4-204ENST00000446876 KIAA0753Q2KHM9 967 aa16.91■□□□□ 0.3
HDAC4-204ENST00000446876 UTP14CQ5TAP6 766 aaKnown RBP16.91■□□□□ 0.3
HDAC4-204ENST00000446876 NFRKBQ6P4R8 1299 aa16.91■□□□□ 0.3
HDAC4-204ENST00000446876 CCDC83Q8IWF9 413 aa16.91■□□□□ 0.3
HDAC4-204ENST00000446876 C16orf70Q9BSU1 422 aa16.91■□□□□ 0.3
HDAC4-204ENST00000446876 UPF2Q9HAU5 1272 aaKnown RBP16.91■□□□□ 0.3
HDAC4-204ENST00000446876 LIMCH1Q9UPQ0 1083 aa16.91■□□□□ 0.3
HDAC4-204ENST00000446876 RANBP2P49792 3224 aaKnown RBP16.91■□□□□ 0.3
HDAC4-204ENST00000446876 HAS3O00219 553 aa16.9■□□□□ 0.3
HDAC4-204ENST00000446876 MEIS1O00470 390 aa16.9■□□□□ 0.3
HDAC4-204ENST00000446876 EDIL3O43854 480 aa16.9■□□□□ 0.3
HDAC4-204ENST00000446876 PPFIA4O75335 1185 aa16.9■□□□□ 0.3
HDAC4-204ENST00000446876 TIMP1P01033 207 aa16.9■□□□□ 0.3
HDAC4-204ENST00000446876 CYP3A4P08684 503 aa16.9■□□□□ 0.3
HDAC4-204ENST00000446876 CYP2C18P33260 490 aa16.9■□□□□ 0.3
HDAC4-204ENST00000446876 EPHB4P54760 987 aa16.9■□□□□ 0.3
HDAC4-204ENST00000446876 ITGB3BPQ13352 177 aaPredicted RBP16.9■□□□□ 0.3
HDAC4-204ENST00000446876 GDF6Q6KF10 455 aaPredicted RBP16.9■□□□□ 0.3
HDAC4-204ENST00000446876 PLA2G4DQ86XP0 818 aa16.9■□□□□ 0.3
HDAC4-204ENST00000446876 BLIDQ8IZY5 108 aa16.9■□□□□ 0.3
HDAC4-204ENST00000446876 DAGLBQ8NCG7 672 aa16.9■□□□□ 0.3
HDAC4-204ENST00000446876 NOC4LQ9BVI4 516 aaKnown RBP16.9■□□□□ 0.3
HDAC4-204ENST00000446876 SEZ6LQ9BYH1 1024 aa16.9■□□□□ 0.3
HDAC4-204ENST00000446876 HIPK3Q9H422 1215 aa16.9■□□□□ 0.3
HDAC4-204ENST00000446876 AGO4Q9HCK5 861 aaKnown RBP16.9■□□□□ 0.3
HDAC4-204ENST00000446876 HDAC6Q9UBN7 1215 aa16.9■□□□□ 0.3
HDAC4-204ENST00000446876 SCN5AQ14524 2016 aa16.9■□□□□ 0.3
HDAC4-204ENST00000446876 TANC1Q9C0D5 1861 aa16.89■□□□□ 0.29
HDAC4-204ENST00000446876 IGLV3-22A0A075B6J6 115 aa16.89■□□□□ 0.29
HDAC4-204ENST00000446876 M0R2N6 131 aa16.89■□□□□ 0.29
HDAC4-204ENST00000446876 DDX39AO00148 427 aaKnown RBP16.89■□□□□ 0.29
HDAC4-204ENST00000446876 RABEP1Q15276 862 aa16.89■□□□□ 0.29
HDAC4-204ENST00000446876 MCTP2Q6DN12 878 aa16.89■□□□□ 0.29
HDAC4-204ENST00000446876 GIMAP8Q8ND71 665 aaPredicted RBP16.89■□□□□ 0.29
HDAC4-204ENST00000446876 OXER1Q8TDS5 423 aa16.89■□□□□ 0.29
HDAC4-204ENST00000446876 TBC1D32Q96NH3 1257 aa16.89■□□□□ 0.29
HDAC4-204ENST00000446876 PHF20Q9BVI0 1012 aa16.89■□□□□ 0.29
HDAC4-204ENST00000446876 KATNAL1Q9BW62 490 aa16.89■□□□□ 0.29
HDAC4-204ENST00000446876 GSTTP1A0A1W2PQM5 241 aa16.88■□□□□ 0.29
HDAC4-204ENST00000446876 H3BRB1 525 aa16.88■□□□□ 0.29
HDAC4-204ENST00000446876 RBAK-RBAKDNI3L0D1 243 aa16.88■□□□□ 0.29
HDAC4-204ENST00000446876 MAFGO15525 162 aa16.88■□□□□ 0.29
HDAC4-204ENST00000446876 TCF7P36402 384 aaPredicted RBP16.88■□□□□ 0.29
HDAC4-204ENST00000446876 ZNF200P98182 395 aaPredicted RBP16.88■□□□□ 0.29
HDAC4-204ENST00000446876 FPGSQ05932 587 aa16.88■□□□□ 0.29
HDAC4-204ENST00000446876 PTPN11Q06124 597 aaPredicted RBP16.88■□□□□ 0.29
HDAC4-204ENST00000446876 HIC1Q14526 733 aa16.88■□□□□ 0.29
HDAC4-204ENST00000446876 PTGISQ16647 500 aa16.88■□□□□ 0.29
HDAC4-204ENST00000446876 C9orf50Q5SZB4 431 aa16.88■□□□□ 0.29
HDAC4-204ENST00000446876 SESTD1Q86VW0 696 aa16.88■□□□□ 0.29
HDAC4-204ENST00000446876 TDHQ8IZJ6 230 aa16.88■□□□□ 0.29
HDAC4-204ENST00000446876 C7orf31Q8N865 590 aa16.88■□□□□ 0.29
HDAC4-204ENST00000446876 TBCKQ8TEA7 893 aa16.88■□□□□ 0.29
HDAC4-204ENST00000446876 CTAGE1Q96RT6 745 aa16.88■□□□□ 0.29
HDAC4-204ENST00000446876 WNT8AQ9H1J5 351 aa16.88■□□□□ 0.29
HDAC4-204ENST00000446876 TUT1Q9H6E5 874 aaKnown RBP16.88■□□□□ 0.29
HDAC4-204ENST00000446876 JPH1Q9HDC5 661 aaPredicted RBP16.88■□□□□ 0.29
HDAC4-204ENST00000446876 GTF2IRD1Q9UHL9 959 aa16.88■□□□□ 0.29
HDAC4-204ENST00000446876 CD2BP2O95400 341 aaKnown RBP16.87■□□□□ 0.29
HDAC4-204ENST00000446876 CSF2RAP15509 400 aa16.87■□□□□ 0.29
HDAC4-204ENST00000446876 CCL23P55773 120 aa16.87■□□□□ 0.29
HDAC4-204ENST00000446876 PRR16Q569H4 304 aa16.87■□□□□ 0.29
HDAC4-204ENST00000446876 MFSD5Q6N075 450 aa16.87■□□□□ 0.29
HDAC4-204ENST00000446876 NIPA1Q7RTP0 329 aa16.87■□□□□ 0.29
HDAC4-204ENST00000446876 LENG9Q96B70 501 aa16.87■□□□□ 0.29
HDAC4-204ENST00000446876 SDF4Q9BRK5 362 aa16.87■□□□□ 0.29
HDAC4-204ENST00000446876 SLC9A2Q9UBY0 812 aa16.87■□□□□ 0.29
HDAC4-204ENST00000446876 NOD1Q9Y239 953 aa16.87■□□□□ 0.29
HDAC4-204ENST00000446876 NFASCO94856 1347 aa16.87■□□□□ 0.29
HDAC4-204ENST00000446876 KAT6AQ92794 2004 aa16.86■□□□□ 0.29
HDAC4-204ENST00000446876 A0A1W2PPC1 479 aa16.86■□□□□ 0.29
HDAC4-204ENST00000446876 SOX1O00570 391 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms