RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 CENPPQ6IPU0 288 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 SYT10Q6XYQ8 523 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 MTERF4Q7Z6M4 381 aaKnown RBP10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 FAM114A1Q8IWE2 563 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 TPH2Q8IWU9 490 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 PANX2Q96RD6 677 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 EIF2AK1Q9BQI3 630 aaKnown RBP10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 ZNF577Q9BSK1 485 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 DESI2Q9BSY9 194 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 NOC4LQ9BVI4 516 aaKnown RBP10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 POLD4Q9HCU8 107 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 EMILIN3Q9NT22 766 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 PKD2L1Q9P0L9 805 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 VAV3Q9UKW4 847 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 ITIH6Q6UXX5 1313 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 LGALS16A8MUM7 142 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 DYNC1I1O14576 645 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 GAS7O60861 476 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 EPS15P42566 896 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 SLC12A3P55017 1021 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 CEP55Q53EZ4 464 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 ARSHQ5FYA8 562 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 FAM26FQ5R3K3 315 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 OTOP1Q7RTM1 612 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 CNGA4Q8IV77 575 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 NELFCDQ8IXH7 590 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 MYOCDQ8IZQ8 938 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 GUF1Q8N442 669 aaKnown RBP10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 KIF18AQ8NI77 898 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 FGFBP2Q9BYJ0 223 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 GGA3Q9NZ52 723 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 PPP2R2CQ9Y2T4 447 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 ZHX2Q9Y6X8 837 aa10.59□□□□□ -0.71
COL6A4P1-201ENST00000446690 RNF225M0QZC1 329 aaPredicted RBP10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 DDX39AO00148 427 aaKnown RBP10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 ARP10275 920 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 TBC1D8BQ0IIM8 1120 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 COBLL1Q53SF7 1204 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 MUM1L1Q5H9M0 696 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 APOBEC3FQ8IUX4 373 aaKnown RBP10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 SCYL3Q8IZE3 742 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 PIGOQ8TEQ8 1089 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 UPF1Q92900 1129 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 TSG101Q99816 390 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 BHMT2Q9H2M3 363 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 GPRC5DQ9NZD1 345 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 COL20A1Q9P218 1284 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 NKRFO15226 690 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 ZBED4O75132 1171 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 KRT9P35527 623 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 DNM2P50570 870 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 USP14P54578 494 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 MCF2L2Q86YR7 1114 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 REXO1L1PQ8IX06 675 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 SYT2Q8N9I0 419 aaPredicted RBP10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 ZNF280CQ8ND82 737 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 CLEC4DQ8WXI8 215 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 DYDC2Q96IM9 177 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 SLC38A10Q9HBR0 1119 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 STK24Q9Y6E0 443 aa10.58□□□□□ -0.72
COL6A4P1-201ENST00000446690 KIF2AO00139 706 aaPredicted RBP10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 TRAF5O00463 557 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 SLC26A4O43511 780 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 PSMD10O75832 226 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 FGFR1OPO95684 399 aaKnown RBP10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 PTPRAP18433 802 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 KLK7P49862 253 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 HMGCS2P54868 508 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 BACE1P56817 501 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 EHHADHQ08426 723 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 ZNF507Q8TCN5 953 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 AS3MTQ9HBK9 375 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 GINM1Q9NU53 330 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 ABHD10Q9NUJ1 306 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 DNAI1Q9UI46 699 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 PPP1R9AQ9ULJ8 1098 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 RABGAP1Q9Y3P9 1069 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 TTC26A0AVF1 554 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 IPO5O00410 1097 aaKnown RBP10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 ZBTB39O15060 712 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 SLITRK3O94933 977 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 TRIM21P19474 475 aaKnown RBP10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 LMNB1P20700 586 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 HSD17B4P51659 736 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 HIRAP54198 1017 aaPredicted RBP10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 LRRC63Q05C16 580 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 TRIM14Q14142 442 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 GIT2Q14161 759 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 SYCP1Q15431 976 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 FKBP15Q5T1M5 1219 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 DLK2Q6UY11 383 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 RAD9BQ6WBX8 426 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 GPC2Q8N158 579 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 SLC5A5Q92911 643 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 WNK4Q96J92 1243 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 TRERF1Q96PN7 1200 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 REEP2Q9BRK0 252 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 MXRA8Q9BRK3 442 aa10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 POLR3CQ9BUI4 534 aaPredicted RBP10.57□□□□□ -0.72
COL6A4P1-201ENST00000446690 NAA15Q9BXJ9 866 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms