RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 MUM1L1Q5H9M0 696 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 LRRC8DQ7L1W4 858 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 DGLUCYQ7Z3D6 616 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 RETREG3Q86VR2 466 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 TMEM192Q8IY95 271 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 MSLNLQ96KJ4 702 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 POP1Q99575 1024 aaKnown RBP8.44□□□□□ -1.06
HDAC9-216ENST00000446646 API5Q9BZZ5 524 aaKnown RBP8.44□□□□□ -1.06
HDAC9-216ENST00000446646 CCDC8Q9H0W5 538 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-216ENST00000446646 SH2D4AQ9H788 454 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 INCENPQ9NQS7 918 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 PKD2L1Q9P0L9 805 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 CLEC1BQ9P126 229 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 PCDHGC3Q9UN70 934 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 HDAC5Q9UQL6 1122 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 WDFY3Q8IZQ1 3526 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 F5H6K3 240 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 SPTLC1O15269 473 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 CKBP12277 381 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 SELPP16109 830 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 RRP1P56182 461 aaKnown RBP8.43□□□□□ -1.06
HDAC9-216ENST00000446646 RBM10P98175 930 aaKnown RBP8.43□□□□□ -1.06
HDAC9-216ENST00000446646 KLRC3Q07444 240 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 CAMK1Q14012 370 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 COL9A2Q14055 689 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-216ENST00000446646 MCM6Q14566 821 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 PTGISQ16647 500 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 DUSP28Q4G0W2 176 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 CCDC158Q5M9N0 1113 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 IQSEC1Q6DN90 963 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 NFRKBQ6P4R8 1299 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 MYOCDQ8IZQ8 938 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 ZNF512BQ96KM6 892 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-216ENST00000446646 BCL11AQ9H165 835 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 ARMT1Q9H993 441 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 CD207Q9UJ71 328 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 NOB1Q9ULX3 412 aaKnown RBP8.43□□□□□ -1.06
HDAC9-216ENST00000446646 TNNQ9UQP3 1299 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 Q9Y3F1 56 aa8.43□□□□□ -1.06
HDAC9-216ENST00000446646 ABHD14A-ACY1A0A1B0GW23 586 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 TCRBV5S4A2TA0A5A2 114 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 ZBED4O75132 1171 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 EYA4O95677 639 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 PDE6AP16499 860 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 JUNDP17535 347 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 RFC5P40937 340 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 ZNF200P98182 395 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-216ENST00000446646 G3BP1Q13283 466 aaKnown RBP eCLIP8.42□□□□□ -1.06
HDAC9-216ENST00000446646 TRIM71Q2Q1W2 868 aaKnown RBP8.42□□□□□ -1.06
HDAC9-216ENST00000446646 ZNF618Q5T7W0 954 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 RASGRP2Q7LDG7 609 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 ADGRD2Q7Z7M1 963 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 FBXO11Q86XK2 927 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 STK11IPQ8N1F8 1099 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 PRPF38AQ8NAV1 312 aaKnown RBP8.42□□□□□ -1.06
HDAC9-216ENST00000446646 CHST13Q8NET6 341 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 OR6J1Q8NGC5 347 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 AFAP1L1Q8TED9 768 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 KAT2BQ92831 832 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 NKD2Q969F2 451 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-216ENST00000446646 EAF2Q96CJ1 260 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-216ENST00000446646 RPGRIP1Q96KN7 1286 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 WDR11Q9BZH6 1224 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 CRNKL1Q9BZJ0 848 aaKnown RBP8.42□□□□□ -1.06
HDAC9-216ENST00000446646 KANSL2Q9H9L4 492 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 RNF146Q9NTX7 359 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 SWAP70Q9UH65 585 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 CTNNA3Q9UI47 895 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 INSL6Q9Y581 213 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 PCDHGC5Q9Y5F6 944 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 LCTP09848 1927 aa8.42□□□□□ -1.06
HDAC9-216ENST00000446646 ZNF532Q9HCE3 1301 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 ASB14A6NK59 587 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 USP17L12C9JPN9 530 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 USP17L21D6R901 530 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 DGAT1O75907 488 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 UPP2O95045 317 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 ARIH2O95376 493 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 SP100P23497 879 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-216ENST00000446646 DNAJB1P25685 340 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 RARSP54136 660 aaKnown RBP8.41□□□□□ -1.06
HDAC9-216ENST00000446646 ADAM15Q13444 863 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 C12orf60Q5U649 245 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 C16orf86Q6ZW13 317 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 FTSJ3Q8IY81 847 aaKnown RBP8.41□□□□□ -1.06
HDAC9-216ENST00000446646 KIAA2013Q8IYS2 634 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 SMRP1Q8NCR6 262 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 DBF4BQ8NFT6 615 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 ARHGAP45Q92619 1136 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 RIPOR3Q96MK2 946 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 ACAD9Q9H845 621 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 CYP39A1Q9NYL5 469 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 FBXO40Q9UH90 709 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 CDH22Q9UJ99 828 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 BARX2Q9UMQ3 279 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-216ENST00000446646 NOD1Q9Y239 953 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 COG6Q9Y2V7 657 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 USP15Q9Y4E8 981 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-216ENST00000446646 LAMA5O15230 3695 aa8.41□□□□□ -1.06
HDAC9-216ENST00000446646 MICAL3Q7RTP6 2002 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms