RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 GOLPH3LQ9H4A5 285 aa8.53□□□□□ -1.04
SF3A3P1-201ENST00000446317 MLXIPQ9HAP2 919 aa8.53□□□□□ -1.04
SF3A3P1-201ENST00000446317 MAP3K20Q9NYL2 800 aaKnown RBP8.53□□□□□ -1.04
SF3A3P1-201ENST00000446317 RGL1Q9NZL6 768 aa8.53□□□□□ -1.04
SF3A3P1-201ENST00000446317 TCEAL9Q9UHQ7 104 aa8.53□□□□□ -1.04
SF3A3P1-201ENST00000446317 PTPN22Q9Y2R2 807 aa8.53□□□□□ -1.04
SF3A3P1-201ENST00000446317 ATP6V1DQ9Y5K8 247 aa8.53□□□□□ -1.04
SF3A3P1-201ENST00000446317 MYH15Q9Y2K3 1946 aa8.53□□□□□ -1.04
SF3A3P1-201ENST00000446317 CASP8AP2Q9UKL3 1982 aa8.53□□□□□ -1.04
SF3A3P1-201ENST00000446317 ZNFX1Q9P2E3 1918 aaKnown RBP8.52□□□□□ -1.04
SF3A3P1-201ENST00000446317 CYP3A7-CYP3A51PA0A087WV96 503 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 A0A1B0GVL5 298 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 POTEFA5A3E0 1075 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 ZBTB39O15060 712 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 HOXC6P09630 235 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 ZNF286BP0CG31 522 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 CYP3A7P24462 503 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 GRK4P32298 578 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 CIITAP33076 1130 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 TRAPPC10P48553 1259 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 SLC39A14Q15043 492 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 ECM1Q16610 540 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 UGCGQ16739 394 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 GNPTABQ3T906 1256 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 SLC9C1Q4G0N8 1177 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 MCTP2Q6DN12 878 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 PPP4R3AQ6IN85 833 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 SHC4Q6S5L8 630 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 DTHD1Q6ZMT9 781 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 DHX37Q8IY37 1157 aaKnown RBP8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 FSIP1Q8NA03 581 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 RASSF8Q8NHQ8 419 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 AFG1LQ8WV93 481 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 STAMQ92783 540 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 SYMPKQ92797 1274 aaKnown RBP8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 SLC5A5Q92911 643 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 ZBTB10Q96DT7 871 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 DYDC2Q96IM9 177 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 MPHOSPH6Q99547 160 aaKnown RBP8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 SDF4Q9BRK5 362 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 TEKT3Q9BXF9 490 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 DOCK5Q9H7D0 1870 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 POLD4Q9HCU8 107 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 KCNMB3Q9NPA1 279 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 DDX41Q9UJV9 622 aaKnown RBP8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 VAV3Q9UKW4 847 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 CFAP45Q9UL16 551 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 CEP131Q9UPN4 1083 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 MCM3APO60318 1980 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 ZNF236Q9UL36 1845 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 SYNGAP1Q96PV0 1343 aa8.52□□□□□ -1.05
SF3A3P1-201ENST00000446317 A0A087X0B3 334 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 POTEB3A0JP26 581 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 B4DLN1 442 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 DHX15O43143 795 aaKnown RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 PSMD10O75832 226 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 YEATS4O95619 227 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 HMGCRP04035 888 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 MYL3P08590 195 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 CYBAP13498 195 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 GCFC2P16383 781 aaKnown RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 LIG1P18858 919 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 TTLL4Q14679 1199 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 KARSQ15046 597 aaKnown RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 HSDL1Q3SXM5 330 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 POTEBQ6S5H4 581 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 POTEGQ6S5H5 508 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 MIER3Q7Z3K6 550 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 CTU1Q7Z7A3 348 aaKnown RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 ZNF467Q7Z7K2 595 aaPredicted RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 GRAMD1CQ8IYS0 662 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 FAM177A1Q8N128 213 aaPredicted RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 SAMD3Q8N6K7 520 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 KRI1Q8N9T8 703 aaKnown RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 MORC4Q8TE76 937 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 SNX29Q8TEQ0 813 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 LRRC15Q8TF66 581 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 ERCC4Q92889 916 aaPredicted RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 GPRASP2Q96D09 838 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 PKNOX2Q96KN3 472 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 SPATA33Q96N06 139 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 MBOAT7Q96N66 472 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 GBP4Q96PP9 640 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 ABHD16BQ9H3Z7 469 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 VTA1Q9NP79 307 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 POLR3EQ9NVU0 708 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 WRAP73Q9P2S5 460 aaPredicted RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 LRWD1Q9UFC0 647 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 RCOR1Q9UKL0 485 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 PCDHA12Q9UN75 941 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 DIS3Q9Y2L1 958 aaKnown RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 DOCK3Q8IZD9 2030 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 GOLGA6L4A6NEF3 574 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 NOP56O00567 594 aaKnown RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 BACH1O14867 736 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 ABCB7O75027 752 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 MED24O75448 989 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 FARP2O94887 1054 aaPredicted RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 SSBP05455 408 aaKnown RBP eCLIP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms