RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 UBA1P22314 1058 aaKnown RBP17.24■□□□□ 0.35
UBE2F-216ENST00000445676 HSD17B4P51659 736 aa17.24■□□□□ 0.35
UBE2F-216ENST00000445676 SP2Q02086 613 aa17.24■□□□□ 0.35
UBE2F-216ENST00000445676 SMAD2Q15796 467 aaKnown RBP17.24■□□□□ 0.35
UBE2F-216ENST00000445676 CLUL1Q15846 466 aa17.24■□□□□ 0.35
UBE2F-216ENST00000445676 DGKHQ86XP1 1220 aa17.24■□□□□ 0.35
UBE2F-216ENST00000445676 IL31RAQ8NI17 732 aa17.24■□□□□ 0.35
UBE2F-216ENST00000445676 IFIH1Q9BYX4 1025 aaKnown RBP17.24■□□□□ 0.35
UBE2F-216ENST00000445676 CCDC171Q6TFL3 1326 aa17.23■□□□□ 0.35
UBE2F-216ENST00000445676 MBTPS2O43462 519 aa17.23■□□□□ 0.35
UBE2F-216ENST00000445676 SMIM10L2AP0DMW4 78 aa17.23■□□□□ 0.35
UBE2F-216ENST00000445676 SMIM10L2BP0DMW5 78 aa17.23■□□□□ 0.35
UBE2F-216ENST00000445676 MYCLP12524 364 aaPredicted RBP17.23■□□□□ 0.35
UBE2F-216ENST00000445676 CTNNB1P35222 781 aa17.23■□□□□ 0.35
UBE2F-216ENST00000445676 GHRHRQ02643 423 aa17.23■□□□□ 0.35
UBE2F-216ENST00000445676 HYAL1Q12794 435 aa17.23■□□□□ 0.35
UBE2F-216ENST00000445676 NMIQ13287 307 aaPredicted RBP17.23■□□□□ 0.35
UBE2F-216ENST00000445676 ASPRV1Q53RT3 343 aa17.23■□□□□ 0.35
UBE2F-216ENST00000445676 HERC4Q5GLZ8 1057 aaPredicted RBP17.23■□□□□ 0.35
UBE2F-216ENST00000445676 ESR2Q92731 530 aa17.23■□□□□ 0.35
UBE2F-216ENST00000445676 GPKOWQ92917 476 aaPredicted RBP eCLIP17.23■□□□□ 0.352e-6■■■■■ 37.1
UBE2F-216ENST00000445676 SNX27Q96L92 541 aa17.23■□□□□ 0.35
UBE2F-216ENST00000445676 UPF3BQ9BZI7 483 aaKnown RBP17.23■□□□□ 0.35
UBE2F-216ENST00000445676 JMJD4Q9H9V9 463 aa17.23■□□□□ 0.35
UBE2F-216ENST00000445676 TBX10O75333 385 aa17.22■□□□□ 0.35
UBE2F-216ENST00000445676 LGALS2P05162 132 aa17.22■□□□□ 0.35
UBE2F-216ENST00000445676 MFSD14AQ96MC6 490 aa17.22■□□□□ 0.35
UBE2F-216ENST00000445676 RNPEPQ9H4A4 650 aa17.22■□□□□ 0.35
UBE2F-216ENST00000445676 RNF41Q9H4P4 317 aaPredicted RBP17.22■□□□□ 0.35
UBE2F-216ENST00000445676 VAT1LQ9HCJ6 419 aa17.22■□□□□ 0.35
UBE2F-216ENST00000445676 C5orf67F2Z3F1 127 aa17.21■□□□□ 0.35
UBE2F-216ENST00000445676 H3BRB1 525 aa17.21■□□□□ 0.35
UBE2F-216ENST00000445676 GRM6O15303 877 aa17.21■□□□□ 0.35
UBE2F-216ENST00000445676 NCK2O43639 380 aa17.21■□□□□ 0.35
UBE2F-216ENST00000445676 DHX16O60231 1041 aaKnown RBP17.21■□□□□ 0.35
UBE2F-216ENST00000445676 CAND2O75155 1236 aa17.21■□□□□ 0.35
UBE2F-216ENST00000445676 GTF2F1P35269 517 aaKnown RBP eCLIP17.21■□□□□ 0.35
UBE2F-216ENST00000445676 PGM5Q15124 567 aa17.21■□□□□ 0.35
UBE2F-216ENST00000445676 KCNV1Q6PIU1 500 aa17.21■□□□□ 0.35
UBE2F-216ENST00000445676 STOX1Q6ZVD7 989 aa17.21■□□□□ 0.35
UBE2F-216ENST00000445676 VSIG10LQ86VR7 867 aa17.21■□□□□ 0.35
UBE2F-216ENST00000445676 RNF135Q8IUD6 432 aa17.21■□□□□ 0.35
UBE2F-216ENST00000445676 PRSS33Q8NF86 280 aa17.21■□□□□ 0.35
UBE2F-216ENST00000445676 ZFP91Q96JP5 570 aaPredicted RBP17.21■□□□□ 0.35
UBE2F-216ENST00000445676 POP1Q99575 1024 aaKnown RBP17.21■□□□□ 0.35
UBE2F-216ENST00000445676 LMAN2LQ9H0V9 348 aa17.21■□□□□ 0.35
UBE2F-216ENST00000445676 TUT1Q9H6E5 874 aaKnown RBP17.21■□□□□ 0.35
UBE2F-216ENST00000445676 BCAS3Q9H6U6 928 aa17.21■□□□□ 0.35
UBE2F-216ENST00000445676 KAT14Q9H8E8 782 aa17.21■□□□□ 0.35
UBE2F-216ENST00000445676 RC3H2Q9HBD1 1191 aaKnown RBP17.21■□□□□ 0.35
UBE2F-216ENST00000445676 SPTBN4Q9H254 2564 aa17.21■□□□□ 0.35
UBE2F-216ENST00000445676 PPP1R11O60927 126 aaPredicted RBP17.2■□□□□ 0.34
UBE2F-216ENST00000445676 KDM4AO75164 1064 aa17.2■□□□□ 0.34
UBE2F-216ENST00000445676 PDE1AP54750 535 aa17.2■□□□□ 0.34
UBE2F-216ENST00000445676 SMAD4Q13485 552 aaKnown RBP17.2■□□□□ 0.34
UBE2F-216ENST00000445676 IQCA1Q86XH1 822 aa17.2■□□□□ 0.34
UBE2F-216ENST00000445676 FIBCD1Q8N539 461 aa17.2■□□□□ 0.34
UBE2F-216ENST00000445676 ENAHQ8N8S7 591 aaPredicted RBP17.2■□□□□ 0.34
UBE2F-216ENST00000445676 APBB2Q92870 758 aa17.2■□□□□ 0.34
UBE2F-216ENST00000445676 IL17RAQ96F46 866 aa17.2■□□□□ 0.34
UBE2F-216ENST00000445676 C11orf84Q9BUA3 381 aaPredicted RBP17.2■□□□□ 0.34
UBE2F-216ENST00000445676 PLXNA4Q9HCM2 1894 aa17.2■□□□□ 0.34
UBE2F-216ENST00000445676 ADGRA3Q8IWK6 1321 aa17.2■□□□□ 0.34
UBE2F-216ENST00000445676 B4E1Z4 1266 aa17.19■□□□□ 0.34
UBE2F-216ENST00000445676 LINC01565O15544 149 aa17.19■□□□□ 0.34
UBE2F-216ENST00000445676 RB1P06400 928 aa17.19■□□□□ 0.34
UBE2F-216ENST00000445676 PARP1P09874 1014 aaKnown RBP17.19■□□□□ 0.34
UBE2F-216ENST00000445676 TGFB3P10600 412 aa17.19■□□□□ 0.34
UBE2F-216ENST00000445676 HOXA13P31271 388 aaPredicted RBP17.19■□□□□ 0.34
UBE2F-216ENST00000445676 BMPR1AP36894 532 aa17.19■□□□□ 0.34
UBE2F-216ENST00000445676 STAG2Q8N3U4 1231 aa17.19■□□□□ 0.34
UBE2F-216ENST00000445676 AMNQ9BXJ7 453 aa17.19■□□□□ 0.34
UBE2F-216ENST00000445676 MLXIPQ9HAP2 919 aa17.19■□□□□ 0.34
UBE2F-216ENST00000445676 PTPRZ1P23471 2315 aaPredicted RBP17.19■□□□□ 0.34
UBE2F-216ENST00000445676 STXBP3O00186 592 aa17.18■□□□□ 0.34
UBE2F-216ENST00000445676 CSPG5O95196 566 aa17.18■□□□□ 0.34
UBE2F-216ENST00000445676 ADAM17P78536 824 aa17.18■□□□□ 0.34
UBE2F-216ENST00000445676 CCDC178Q5BJE1 867 aa17.18■□□□□ 0.34
UBE2F-216ENST00000445676 FAM26DQ5JW98 314 aa17.18■□□□□ 0.34
UBE2F-216ENST00000445676 IER5LQ5T953 404 aa17.18■□□□□ 0.34
UBE2F-216ENST00000445676 TRIM50Q86XT4 487 aa17.18■□□□□ 0.34
UBE2F-216ENST00000445676 EDAQ92838 391 aa17.18■□□□□ 0.34
UBE2F-216ENST00000445676 CLP1Q92989 425 aaKnown RBP17.18■□□□□ 0.34
UBE2F-216ENST00000445676 MTMR8Q96EF0 704 aa17.18■□□□□ 0.34
UBE2F-216ENST00000445676 ZSCAN10Q96SZ4 725 aaPredicted RBP17.18■□□□□ 0.34
UBE2F-216ENST00000445676 SETD4Q9NVD3 440 aa17.18■□□□□ 0.34
UBE2F-216ENST00000445676 ZFHX2Q9C0A1 2572 aaPredicted RBP17.17■□□□□ 0.34
UBE2F-216ENST00000445676 MMP1P03956 469 aa17.17■□□□□ 0.34
UBE2F-216ENST00000445676 CCND2P30279 289 aa17.17■□□□□ 0.34
UBE2F-216ENST00000445676 ANKRD45Q5TZF3 282 aa17.17■□□□□ 0.34
UBE2F-216ENST00000445676 BMP8AQ7Z5Y6 402 aa17.17■□□□□ 0.34
UBE2F-216ENST00000445676 TICAM2Q86XR7 235 aa17.17■□□□□ 0.34
UBE2F-216ENST00000445676 IGFLR1Q9H665 355 aa17.17■□□□□ 0.34
UBE2F-216ENST00000445676 MAP3K20Q9NYL2 800 aaKnown RBP17.17■□□□□ 0.34
UBE2F-216ENST00000445676 CD207Q9UJ71 328 aa17.17■□□□□ 0.34
UBE2F-216ENST00000445676 RWDD3Q9Y3V2 267 aa17.17■□□□□ 0.34
UBE2F-216ENST00000445676 TELO2Q9Y4R8 837 aa17.17■□□□□ 0.34
UBE2F-216ENST00000445676 SUPT16HQ9Y5B9 1047 aaKnown RBP17.17■□□□□ 0.34
UBE2F-216ENST00000445676 TRIM6-TRIM34B2RNG4 842 aa17.16■□□□□ 0.34
UBE2F-216ENST00000445676 ZNF213O14771 459 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms