RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 KRT32Q14532 448 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 GRM4Q14833 912 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 PTPROQ16827 1216 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 CCDC144BQ3MJ40 725 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 TCEAL5Q5H9L2 206 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 MUM1L1Q5H9M0 696 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 GPATCH4Q5T3I0 446 aaKnown RBP10.71□□□□□ -0.69
LINC00642-203ENST00000444942 BTNL9Q6UXG8 535 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 DHX32Q7L7V1 743 aaKnown RBP10.71□□□□□ -0.69
LINC00642-203ENST00000444942 HOMER1Q86YM7 354 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 ADGRF4Q8IZF3 695 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 BANK1Q8NDB2 785 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 DDX11Q96FC9 970 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 TMEM87BQ96K49 555 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 TRERF1Q96PN7 1200 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 ZBED2Q9BTP6 218 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 RANBP17Q9H2T7 1088 aaKnown RBP10.71□□□□□ -0.69
LINC00642-203ENST00000444942 CLDND1Q9NY35 253 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 MAD2L2Q9UI95 211 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 RALYQ9UKM9 306 aaKnown RBP10.71□□□□□ -0.69
LINC00642-203ENST00000444942 CIZ1Q9ULV3 898 aaPredicted RBP10.71□□□□□ -0.69
LINC00642-203ENST00000444942 LCTP09848 1927 aa10.7□□□□□ -0.7
LINC00642-203ENST00000444942 WDR5P61964 334 aaKnown RBP10.7□□□□□ -0.7
LINC00642-203ENST00000444942 CDC37Q16543 378 aaPredicted RBP10.7□□□□□ -0.7
LINC00642-203ENST00000444942 BLOC1S2Q6QNY1 142 aa10.7□□□□□ -0.7
LINC00642-203ENST00000444942 NSMFQ6X4W1 530 aa10.7□□□□□ -0.7
LINC00642-203ENST00000444942 Q6ZUG5 572 aa10.7□□□□□ -0.7
LINC00642-203ENST00000444942 TMCO2Q7Z6W1 182 aaPredicted RBP10.7□□□□□ -0.7
LINC00642-203ENST00000444942 MICU3Q86XE3 530 aa10.7□□□□□ -0.7
LINC00642-203ENST00000444942 CMTR1Q8N1G2 835 aaKnown RBP10.7□□□□□ -0.7
LINC00642-203ENST00000444942 ANKRD35Q8N283 1001 aa10.7□□□□□ -0.7
LINC00642-203ENST00000444942 CCDC82Q8N4S0 544 aa10.7□□□□□ -0.7
LINC00642-203ENST00000444942 FBXO22Q8NEZ5 403 aa10.7□□□□□ -0.7
LINC00642-203ENST00000444942 RAD9AQ99638 391 aa10.7□□□□□ -0.7
LINC00642-203ENST00000444942 LARP6Q9BRS8 491 aaKnown RBP10.7□□□□□ -0.7
LINC00642-203ENST00000444942 FTOQ9C0B1 505 aaKnown RBP eCLIP10.7□□□□□ -0.7
LINC00642-203ENST00000444942 ALDH8A1Q9H2A2 487 aaPredicted RBP10.7□□□□□ -0.7
LINC00642-203ENST00000444942 SLC12A7Q9Y666 1083 aa10.7□□□□□ -0.7
LINC00642-203ENST00000444942 ATP2A1O14983 1001 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 CD2BP2O95400 341 aaKnown RBP10.69□□□□□ -0.7
LINC00642-203ENST00000444942 ICAM1P05362 532 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 SUPT20HL2P0C7V6 817 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 FDX1P10109 184 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 CYP2C9P11712 490 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 COPB2P35606 906 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 OAZ1P54368 228 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 EXOSC10Q01780 885 aaKnown RBP10.69□□□□□ -0.7
LINC00642-203ENST00000444942 APOBRQ0VD83 1088 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 SMAD4Q13485 552 aaKnown RBP10.69□□□□□ -0.7
LINC00642-203ENST00000444942 CTC1Q2NKJ3 1217 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 TSGA10IPQ3SY00 556 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 SYNE3Q6ZMZ3 975 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 RPAINQ86UA6 219 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 CTCFLQ8NI51 663 aaPredicted RBP10.69□□□□□ -0.7
LINC00642-203ENST00000444942 KCNB2Q92953 911 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 PURBQ96QR8 312 aaKnown RBP10.69□□□□□ -0.7
LINC00642-203ENST00000444942 ABHD16BQ9H3Z7 469 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 ACAD9Q9H845 621 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 JMJD4Q9H9V9 463 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 DLL3Q9NYJ7 618 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 RALGAPA2Q2PPJ7 1873 aa10.69□□□□□ -0.7
LINC00642-203ENST00000444942 MICAL3Q7RTP6 2002 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 OTOGLQ3ZCN5 2332 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 KLF18A0A0U1RQI7 1052 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 PTPDC1A2A3K4 754 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 PALM3A6NDB9 673 aaPredicted RBP10.68□□□□□ -0.7
LINC00642-203ENST00000444942 LOC730098B7Z3J9 87 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 NFIBO00712 420 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 NCK2O43639 380 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 GJB5O95377 273 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 PLEKHA8P1O95397 391 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 IQCF3P0C7M6 154 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 RPS6KB1P23443 525 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 MCM2P49736 904 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 PSMC6P62333 389 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 CNTN2Q02246 1040 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 TROAPQ12815 778 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 CBX2Q14781 532 aaPredicted RBP10.68□□□□□ -0.7
LINC00642-203ENST00000444942 CLUL1Q15846 466 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 SLC35G1Q2M3R5 365 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 QRICH1Q2TAL8 776 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 CHST13Q8NET6 341 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 IL17RAQ96F46 866 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 PIGSQ96S52 555 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 C17orf80Q9BSJ5 609 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 NSUN3Q9H649 340 aaKnown RBP10.68□□□□□ -0.7
LINC00642-203ENST00000444942 BRPF3Q9ULD4 1205 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 DDX49Q9Y6V7 483 aaKnown RBP10.68□□□□□ -0.7
LINC00642-203ENST00000444942 ASTN1O14525 1302 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 ZFYVE26Q68DK2 2539 aa10.68□□□□□ -0.7
LINC00642-203ENST00000444942 hCG_1642624A0A1W2PR95 340 aa10.67□□□□□ -0.7
LINC00642-203ENST00000444942 PITPNM1O00562 1244 aa10.67□□□□□ -0.7
LINC00642-203ENST00000444942 DDAH1O94760 285 aa10.67□□□□□ -0.7
LINC00642-203ENST00000444942 HMGB1P09429 215 aaKnown RBP10.67□□□□□ -0.7
LINC00642-203ENST00000444942 PSMA5P28066 241 aa10.67□□□□□ -0.7
LINC00642-203ENST00000444942 LIFRP42702 1097 aa10.67□□□□□ -0.7
LINC00642-203ENST00000444942 DEFB103AP81534 67 aa10.67□□□□□ -0.7
LINC00642-203ENST00000444942 DLX2Q07687 328 aaPredicted RBP10.67□□□□□ -0.7
LINC00642-203ENST00000444942 ZNF467Q7Z7K2 595 aaPredicted RBP10.67□□□□□ -0.7
LINC00642-203ENST00000444942 FBXO11Q86XK2 927 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms