RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 UBE3AQ05086 875 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 ARHGAP1Q07960 439 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 TDGQ13569 410 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 CES5AQ6NT32 575 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 FAM160B2Q86V87 743 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 DHX37Q8IY37 1157 aaKnown RBP12.15□□□□□ -0.46
HDAC8-215ENST00000444609 CMTR2Q8IYT2 770 aaKnown RBP12.15□□□□□ -0.46
HDAC8-215ENST00000444609 GMCL1P1Q8NEA9 526 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 NETO1Q8TDF5 533 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 CHURC1Q8WUH1 139 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 STAG1Q8WVM7 1258 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 SSH1Q8WYL5 1049 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 DLGAP2Q9P1A6 1054 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 SYNPO2Q9UMS6 1093 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 DUSP12Q9UNI6 340 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 USTQ9Y2C2 406 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 MYO5AQ9Y4I1 1855 aaKnown RBP12.14□□□□□ -0.47
HDAC8-215ENST00000444609 SPTLC1O15269 473 aa12.14□□□□□ -0.47
HDAC8-215ENST00000444609 CAND2O75155 1236 aa12.14□□□□□ -0.47
HDAC8-215ENST00000444609 PDE6AP16499 860 aa12.14□□□□□ -0.47
HDAC8-215ENST00000444609 ERVFC1P60507 584 aa12.14□□□□□ -0.47
HDAC8-215ENST00000444609 ITIH3Q06033 890 aa12.14□□□□□ -0.47
HDAC8-215ENST00000444609 SLC9C2Q5TAH2 1124 aa12.14□□□□□ -0.47
HDAC8-215ENST00000444609 SLFN13Q68D06 897 aa12.14□□□□□ -0.47
HDAC8-215ENST00000444609 PDE12Q6L8Q7 609 aaKnown RBP12.14□□□□□ -0.47
HDAC8-215ENST00000444609 AMOTL1Q8IY63 956 aa12.14□□□□□ -0.47
HDAC8-215ENST00000444609 MAML2Q8IZL2 1156 aaPredicted RBP12.14□□□□□ -0.47
HDAC8-215ENST00000444609 KDF1Q8NAX2 398 aaPredicted RBP12.14□□□□□ -0.47
HDAC8-215ENST00000444609 PARD6AQ9NPB6 346 aa12.14□□□□□ -0.47
HDAC8-215ENST00000444609 DBNLQ9UJU6 430 aaKnown RBP12.14□□□□□ -0.47
HDAC8-215ENST00000444609 GCN1Q92616 2671 aaKnown RBP12.14□□□□□ -0.47
HDAC8-215ENST00000444609 IGKV6D-41A0A0C4DH26 115 aa12.13□□□□□ -0.47
HDAC8-215ENST00000444609 KRBA1A5PL33 1030 aa12.13□□□□□ -0.47
HDAC8-215ENST00000444609 CTSHP09668 335 aa12.13□□□□□ -0.47
HDAC8-215ENST00000444609 SNAP25P60880 206 aa12.13□□□□□ -0.47
HDAC8-215ENST00000444609 LY6KQ17RY6 165 aa12.13□□□□□ -0.47
HDAC8-215ENST00000444609 ZNF528Q3MIS6 628 aa12.13□□□□□ -0.47
HDAC8-215ENST00000444609 TPRNQ4KMQ1 711 aa12.13□□□□□ -0.47
HDAC8-215ENST00000444609 N4BP2L1Q5TBK1 243 aaPredicted RBP12.13□□□□□ -0.47
HDAC8-215ENST00000444609 LLGL2Q6P1M3 1020 aa12.13□□□□□ -0.47
HDAC8-215ENST00000444609 CHST3Q7LGC8 479 aa12.13□□□□□ -0.47
HDAC8-215ENST00000444609 MPHOSPH6Q99547 160 aaKnown RBP12.13□□□□□ -0.47
HDAC8-215ENST00000444609 PRKRIP1Q9H875 184 aaPredicted RBP12.13□□□□□ -0.47
HDAC8-215ENST00000444609 ARMT1Q9H993 441 aa12.13□□□□□ -0.47
HDAC8-215ENST00000444609 WNT16Q9UBV4 365 aa12.13□□□□□ -0.47
HDAC8-215ENST00000444609 CCPG1Q9ULG6 757 aa12.13□□□□□ -0.47
HDAC8-215ENST00000444609 FRYQ5TBA9 3013 aa12.13□□□□□ -0.47
HDAC8-215ENST00000444609 ZNF532Q9HCE3 1301 aa12.12□□□□□ -0.47
HDAC8-215ENST00000444609 TCRBV5S4A2TA0A5A2 114 aa12.12□□□□□ -0.47
HDAC8-215ENST00000444609 FSCN2O14926 492 aa12.12□□□□□ -0.47
HDAC8-215ENST00000444609 PLA2G6O60733 806 aa12.12□□□□□ -0.47
HDAC8-215ENST00000444609 DCNP07585 359 aaKnown RBP12.12□□□□□ -0.47
HDAC8-215ENST00000444609 ZNF286BP0CG31 522 aa12.12□□□□□ -0.47
HDAC8-215ENST00000444609 RASA1P20936 1047 aa12.12□□□□□ -0.47
HDAC8-215ENST00000444609 MTHFRP42898 656 aa12.12□□□□□ -0.47
HDAC8-215ENST00000444609 RING1Q06587 406 aa12.12□□□□□ -0.47
HDAC8-215ENST00000444609 SPECC1Q5M775 1068 aa12.12□□□□□ -0.47
HDAC8-215ENST00000444609 ATP6V0A1Q93050 837 aa12.12□□□□□ -0.47
HDAC8-215ENST00000444609 CYP26B1Q9NR63 512 aa12.12□□□□□ -0.47
HDAC8-215ENST00000444609 TLR7Q9NYK1 1049 aaKnown RBP12.12□□□□□ -0.47
HDAC8-215ENST00000444609 LHX6Q9UPM6 363 aa12.12□□□□□ -0.47
HDAC8-215ENST00000444609 PTPDC1A2A3K4 754 aa12.11□□□□□ -0.47
HDAC8-215ENST00000444609 POTEMA6NI47 508 aa12.11□□□□□ -0.47
HDAC8-215ENST00000444609 C1QTNF9BB2RNN3 333 aa12.11□□□□□ -0.47
HDAC8-215ENST00000444609 TAF4O00268 1085 aa12.11□□□□□ -0.47
HDAC8-215ENST00000444609 NFIBO00712 420 aa12.11□□□□□ -0.47
HDAC8-215ENST00000444609 EOMESO95936 686 aa12.11□□□□□ -0.47
HDAC8-215ENST00000444609 ICAM1P05362 532 aa12.11□□□□□ -0.47
HDAC8-215ENST00000444609 C1QTNF9P0C862 333 aa12.11□□□□□ -0.47
HDAC8-215ENST00000444609 CALML3P27482 149 aa12.11□□□□□ -0.47
HDAC8-215ENST00000444609 IKQ13123 557 aaPredicted RBP12.11□□□□□ -0.47
HDAC8-215ENST00000444609 FAM26DQ5JW98 314 aa12.11□□□□□ -0.47
HDAC8-215ENST00000444609 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
HDAC8-215ENST00000444609 SLC30A10Q6XR72 485 aa12.11□□□□□ -0.47
HDAC8-215ENST00000444609 DNERQ8NFT8 737 aa12.11□□□□□ -0.47
HDAC8-215ENST00000444609 DDX1Q92499 740 aaKnown RBP12.11□□□□□ -0.47
HDAC8-215ENST00000444609 EMID1Q96A84 441 aaPredicted RBP12.11□□□□□ -0.47
HDAC8-215ENST00000444609 EPC1Q9H2F5 836 aa12.11□□□□□ -0.47
HDAC8-215ENST00000444609 SMG5Q9UPR3 1016 aaKnown RBP12.11□□□□□ -0.47
HDAC8-215ENST00000444609 SIT1Q9Y3P8 196 aa12.11□□□□□ -0.47
HDAC8-215ENST00000444609 PNMA6EA0A0J9YXQ4 647 aa12.1□□□□□ -0.47
HDAC8-215ENST00000444609 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.1□□□□□ -0.47
HDAC8-215ENST00000444609 TREHO43280 583 aa12.1□□□□□ -0.47
HDAC8-215ENST00000444609 RFX1P22670 979 aa12.1□□□□□ -0.47
HDAC8-215ENST00000444609 HOXC8P31273 242 aa12.1□□□□□ -0.47
HDAC8-215ENST00000444609 CTR9Q6PD62 1173 aa12.1□□□□□ -0.47
HDAC8-215ENST00000444609 UNQ6494/PRO21346Q6UXR6 183 aa12.1□□□□□ -0.47
HDAC8-215ENST00000444609 ATRIPQ8WXE1 791 aa12.1□□□□□ -0.47
HDAC8-215ENST00000444609 CASP10Q92851 521 aa12.1□□□□□ -0.47
HDAC8-215ENST00000444609 GMCL1Q96IK5 515 aa12.1□□□□□ -0.47
HDAC8-215ENST00000444609 CCDC8Q9H0W5 538 aaPredicted RBP12.1□□□□□ -0.47
HDAC8-215ENST00000444609 TBC1D17Q9HA65 648 aa12.1□□□□□ -0.47
HDAC8-215ENST00000444609 KCNK12Q9HB15 430 aa12.1□□□□□ -0.47
HDAC8-215ENST00000444609 MTMR4Q9NYA4 1195 aa12.1□□□□□ -0.47
HDAC8-215ENST00000444609 PRR12Q9ULL5 1215 aa12.1□□□□□ -0.47
HDAC8-215ENST00000444609 ISY1Q9ULR0 285 aaKnown RBP12.1□□□□□ -0.47
HDAC8-215ENST00000444609 PCDHGA2Q9Y5H1 932 aa12.1□□□□□ -0.47
HDAC8-215ENST00000444609 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.1□□□□□ -0.47
HDAC8-215ENST00000444609 FANCMQ8IYD8 2048 aa12.1□□□□□ -0.47
HDAC8-215ENST00000444609 C17orf102A2RUQ5 167 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms