RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 H3BRB1 525 aa21.56■■□□□ 1.04
ATPAF2-201ENST00000444058 CLK2P49760 499 aaKnown RBP21.56■■□□□ 1.04
ATPAF2-201ENST00000444058 MTMR1Q13613 665 aa21.56■■□□□ 1.04
ATPAF2-201ENST00000444058 NTRK3Q16288 839 aa21.56■■□□□ 1.04
ATPAF2-201ENST00000444058 MCTP2Q6DN12 878 aa21.56■■□□□ 1.04
ATPAF2-201ENST00000444058 GPR20Q99678 358 aa21.56■■□□□ 1.04
ATPAF2-201ENST00000444058 RNF26Q9BY78 433 aaPredicted RBP21.56■■□□□ 1.04
ATPAF2-201ENST00000444058 TUT1Q9H6E5 874 aaKnown RBP21.56■■□□□ 1.04
ATPAF2-201ENST00000444058 BCAS3Q9H6U6 928 aa21.56■■□□□ 1.04
ATPAF2-201ENST00000444058 JADE2Q9NQC1 790 aa21.56■■□□□ 1.04
ATPAF2-201ENST00000444058 MYH7BA7E2Y1 1941 aa21.56■■□□□ 1.04
ATPAF2-201ENST00000444058 LGALS2P05162 132 aa21.55■■□□□ 1.04
ATPAF2-201ENST00000444058 IQCF3P0C7M6 154 aa21.55■■□□□ 1.04
ATPAF2-201ENST00000444058 IFNAR1P17181 557 aa21.55■■□□□ 1.04
ATPAF2-201ENST00000444058 ANAPC15P60006 121 aa21.55■■□□□ 1.04
ATPAF2-201ENST00000444058 TOB2Q14106 344 aaPredicted RBP21.55■■□□□ 1.04
ATPAF2-201ENST00000444058 ZNF697Q5TEC3 545 aa21.55■■□□□ 1.04
ATPAF2-201ENST00000444058 Q7L0L9 218 aa21.55■■□□□ 1.04
ATPAF2-201ENST00000444058 AFAP1L1Q8TED9 768 aa21.55■■□□□ 1.04
ATPAF2-201ENST00000444058 PPP1R13LQ8WUF5 828 aa21.55■■□□□ 1.04
ATPAF2-201ENST00000444058 ZNF274Q96GC6 653 aaPredicted RBP21.55■■□□□ 1.04
ATPAF2-201ENST00000444058 ALG1Q9BT22 464 aa21.55■■□□□ 1.04
ATPAF2-201ENST00000444058 ZMYND12Q9H0C1 365 aa21.55■■□□□ 1.04
ATPAF2-201ENST00000444058 SORBS3O60504 671 aa21.54■■□□□ 1.04
ATPAF2-201ENST00000444058 PARNO95453 639 aaKnown RBP21.54■■□□□ 1.04
ATPAF2-201ENST00000444058 KCNA2P16389 499 aa21.54■■□□□ 1.04
ATPAF2-201ENST00000444058 AKAP17AQ02040 695 aaKnown RBP21.54■■□□□ 1.04
ATPAF2-201ENST00000444058 PKN1Q16512 942 aa21.54■■□□□ 1.04
ATPAF2-201ENST00000444058 VWCEQ96DN2 955 aa21.54■■□□□ 1.04
ATPAF2-201ENST00000444058 SCLYQ96I15 445 aa21.54■■□□□ 1.04
ATPAF2-201ENST00000444058 ANO3Q9BYT9 981 aa21.54■■□□□ 1.04
ATPAF2-201ENST00000444058 LAMA2P24043 3122 aaKnown RBP21.53■■□□□ 1.04
ATPAF2-201ENST00000444058 ATP9AO75110 1047 aa21.53■■□□□ 1.04
ATPAF2-201ENST00000444058 GNA11P29992 359 aa21.53■■□□□ 1.04
ATPAF2-201ENST00000444058 HOXC8P31273 242 aa21.53■■□□□ 1.04
ATPAF2-201ENST00000444058 SREBF1P36956 1147 aa21.53■■□□□ 1.04
ATPAF2-201ENST00000444058 PTK7Q13308 1070 aa21.53■■□□□ 1.04
ATPAF2-201ENST00000444058 MXRA8Q9BRK3 442 aa21.53■■□□□ 1.04
ATPAF2-201ENST00000444058 C6orf50Q9HD87 102 aa21.53■■□□□ 1.04
ATPAF2-201ENST00000444058 ZNF215Q9UL58 517 aaPredicted RBP21.53■■□□□ 1.04
ATPAF2-201ENST00000444058 CEP55Q53EZ4 464 aa21.52■■□□□ 1.04
ATPAF2-201ENST00000444058 PHKBQ93100 1093 aa21.52■■□□□ 1.04
ATPAF2-201ENST00000444058 UPF3BQ9BZI7 483 aaKnown RBP21.52■■□□□ 1.04
ATPAF2-201ENST00000444058 KCNH7Q9NS40 1196 aa21.52■■□□□ 1.04
ATPAF2-201ENST00000444058 PDRG1Q9NUG6 133 aa21.52■■□□□ 1.04
ATPAF2-201ENST00000444058 STXBP5LQ9Y2K9 1186 aa21.52■■□□□ 1.04
ATPAF2-201ENST00000444058 SELPP16109 830 aa21.51■■□□□ 1.03
ATPAF2-201ENST00000444058 CCT2P78371 535 aaKnown RBP21.51■■□□□ 1.03
ATPAF2-201ENST00000444058 NIPA1Q7RTP0 329 aa21.51■■□□□ 1.03
ATPAF2-201ENST00000444058 OTOP2Q7RTS6 562 aa21.51■■□□□ 1.03
ATPAF2-201ENST00000444058 CCDC148Q8NFR7 591 aa21.51■■□□□ 1.03
ATPAF2-201ENST00000444058 DHX38Q92620 1227 aaKnown RBP21.51■■□□□ 1.03
ATPAF2-201ENST00000444058 IL17RAQ96F46 866 aa21.51■■□□□ 1.03
ATPAF2-201ENST00000444058 SEMA6BQ9H3T3 888 aa21.51■■□□□ 1.03
ATPAF2-201ENST00000444058 CXXC1Q9P0U4 656 aaPredicted RBP21.51■■□□□ 1.03
ATPAF2-201ENST00000444058 MEIS1O00470 390 aa21.5■■□□□ 1.03
ATPAF2-201ENST00000444058 GNAT1P11488 350 aa21.5■■□□□ 1.03
ATPAF2-201ENST00000444058 ACTN1P12814 892 aa21.5■■□□□ 1.03
ATPAF2-201ENST00000444058 SERINC5Q86VE9 423 aa21.5■■□□□ 1.03
ATPAF2-201ENST00000444058 TRIM22Q8IYM9 498 aa21.5■■□□□ 1.03
ATPAF2-201ENST00000444058 REXO1Q8N1G1 1221 aaKnown RBP21.5■■□□□ 1.03
ATPAF2-201ENST00000444058 BICD2Q8TD16 824 aa21.5■■□□□ 1.03
ATPAF2-201ENST00000444058 CRYGNQ8WXF5 182 aa21.5■■□□□ 1.03
ATPAF2-201ENST00000444058 SEPT1Q8WYJ6 367 aa21.5■■□□□ 1.03
ATPAF2-201ENST00000444058 SH3GLB2Q9NR46 395 aa21.5■■□□□ 1.03
ATPAF2-201ENST00000444058 NFASCO94856 1347 aa21.5■■□□□ 1.03
ATPAF2-201ENST00000444058 C17orf102A2RUQ5 167 aa21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 CYP3A4P08684 503 aa21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 SMIM10L2AP0DMW4 78 aa21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 SMIM10L2BP0DMW5 78 aa21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 CKBP12277 381 aa21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 DNAJB2P25686 324 aa21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 TCF7P36402 384 aaPredicted RBP21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 ARHGAP4P98171 946 aa21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 TRIM71Q2Q1W2 868 aaKnown RBP21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 LRRC8DQ7L1W4 858 aa21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 DEFB128Q7Z7B8 93 aa21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 FAM177A1Q8N128 213 aaPredicted RBP21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 PGBD1Q96JS3 809 aa21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 SLC26A6Q9BXS9 759 aa21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 RNPEPQ9H4A4 650 aa21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 NCOA5Q9HCD5 579 aaKnown RBP21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 JPH1Q9HDC5 661 aaPredicted RBP21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 TMEM260Q9NX78 707 aa21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 SLC4A7Q9Y6M7 1214 aa21.49■■□□□ 1.03
ATPAF2-201ENST00000444058 GSTTP1A0A1W2PQM5 241 aa21.48■■□□□ 1.03
ATPAF2-201ENST00000444058 CPLX1O14810 134 aa21.48■■□□□ 1.03
ATPAF2-201ENST00000444058 SP4Q02446 784 aa21.48■■□□□ 1.03
ATPAF2-201ENST00000444058 HIC1Q14526 733 aa21.48■■□□□ 1.03
ATPAF2-201ENST00000444058 JAKMIP3Q5VZ66 844 aa21.48■■□□□ 1.03
ATPAF2-201ENST00000444058 CPLX2Q6PUV4 134 aaKnown RBP21.48■■□□□ 1.03
ATPAF2-201ENST00000444058 CYP2W1Q8TAV3 490 aa21.48■■□□□ 1.03
ATPAF2-201ENST00000444058 GUCD1Q96NT3 240 aa21.48■■□□□ 1.03
ATPAF2-201ENST00000444058 PBX4Q9BYU1 374 aa21.48■■□□□ 1.03
ATPAF2-201ENST00000444058 TTYH1Q9H313 450 aaPredicted RBP21.48■■□□□ 1.03
ATPAF2-201ENST00000444058 TELO2Q9Y4R8 837 aa21.48■■□□□ 1.03
ATPAF2-201ENST00000444058 TANC1Q9C0D5 1861 aa21.47■■□□□ 1.03
ATPAF2-201ENST00000444058 CAND2O75155 1236 aa21.47■■□□□ 1.03
ATPAF2-201ENST00000444058 BAIAP3O94812 1187 aa21.47■■□□□ 1.03
ATPAF2-201ENST00000444058 CXCL10P02778 98 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms