RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 SLC26A4O43511 780 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 MYL1P05976 194 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 AMPD3Q01432 767 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 PPP2R5CQ13362 524 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 CUL4BQ13620 913 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 TMEM119Q4V9L6 283 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 POTEBQ6S5H4 581 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 OTOP1Q7RTM1 612 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 LUZP1Q86V48 1076 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 TRIML1Q8N9V2 468 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 SPATA20Q8TB22 786 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 LRRC15Q8TF66 581 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 LARP4BQ92615 738 aaKnown RBP10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 GSDMAQ96QA5 445 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 IWS1Q96ST2 819 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 PTPN18Q99952 460 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 CBX8Q9HC52 389 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 AGO4Q9HCK5 861 aaKnown RBP10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 ABT1Q9ULW3 272 aaKnown RBP10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 KIAA1024Q9UPX6 916 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 STAM2O75886 525 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 FCER1AP12319 257 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 SARSP49591 514 aaKnown RBP10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 CYP4A11Q02928 519 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 GNPTABQ3T906 1256 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 SV2BQ7L1I2 683 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 NLRX1Q86UT6 975 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 SHCBP1Q8NEM2 672 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 UBE2Q2Q8WVN8 375 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 RAD54LQ92698 747 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 MMP19Q99542 508 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 TCEAL9Q9UHQ7 104 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 PCNTO95613 3336 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 LCTP09848 1927 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 POTEFA5A3E0 1075 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 MANSC4A6NHS7 340 aaPredicted RBP10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 BECN2A8MW95 431 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 EML1O00423 815 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 MED24O75448 989 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 RPA1P27694 616 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 ALDH5A1P51649 535 aaPredicted RBP10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 STXBP2Q15833 593 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 ECM1Q16610 540 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 UVSSAQ2YD98 709 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 HYIQ5T013 277 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 POTEGQ6S5H5 508 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 KCNK18Q7Z418 384 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 CATSPER3Q86XQ3 398 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 GPRASP2Q96D09 838 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 INPP4AQ96PE3 977 aaPredicted RBP10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 EIF2AK1Q9BQI3 630 aaKnown RBP10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 PORCNQ9H237 461 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 UNC45AQ9H3U1 944 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 R3HDMLQ9H3Y0 253 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 TBC1D22BQ9NU19 505 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 BLOC1S4Q9NUP1 217 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 RMND1Q9NWS8 449 aa10.64□□□□□ -0.71
SMPD4P1-203ENST00000443839 B4DLN1 442 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 GOLGA6L19H0YKK7 550 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 RPN1P04843 607 aaKnown RBP10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 SSBP05455 408 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 PGK2P07205 417 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 PDE4DQ08499 809 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 ITGB3BPQ13352 177 aaPredicted RBP10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 MORC3Q14149 939 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 MCM6Q14566 821 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 FAM133AQ8N9E0 248 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 MLKLQ8NB16 471 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 CDHR1Q96JP9 859 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 MPHOSPH6Q99547 160 aaKnown RBP10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 LRRC27Q9C0I9 530 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 RNF39Q9H2S5 420 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 EFCC1Q9HA90 598 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 DACH1Q9UI36 760 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 SAMM50Q9Y512 469 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 TLL2Q9Y6L7 1015 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 ASTN1O14525 1302 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 KIAA1217Q5T5P2 1943 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 MAFGO15525 162 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 ABCB7O75027 752 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 EIF3JO75822 258 aaKnown RBP10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 SLC10A3P09131 477 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 SPATA31C1P0DKV0 1188 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 BMP6P22004 513 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 ASIC1P78348 528 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.63□□□□□ -0.716e-6■■■□□ 14.6
SMPD4P1-203ENST00000443839 CCDC47Q96A33 483 aaKnown RBP10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 POLR3CQ9BUI4 534 aaPredicted RBP10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 TRIM9Q9C026 710 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 RGL1Q9NZL6 768 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 MORF4L1Q9UBU8 362 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 DNM3Q9UQ16 869 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 IVNS1ABPQ9Y6Y0 642 aa10.63□□□□□ -0.71
SMPD4P1-203ENST00000443839 SOWAHBA6NEL2 793 aa10.62□□□□□ -0.71
SMPD4P1-203ENST00000443839 TMEM88BA6NKF7 163 aa10.62□□□□□ -0.71
SMPD4P1-203ENST00000443839 E9PMD0 336 aa10.62□□□□□ -0.71
SMPD4P1-203ENST00000443839 DHX15O43143 795 aaKnown RBP10.62□□□□□ -0.71
SMPD4P1-203ENST00000443839 ATP9AO75110 1047 aa10.62□□□□□ -0.71
SMPD4P1-203ENST00000443839 RGS20O76081 388 aa10.62□□□□□ -0.71
SMPD4P1-203ENST00000443839 TOMM70O94826 608 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms