RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 LGALS2P05162 132 aa23.37■■□□□ 1.33
UBE2D4-205ENST00000443780 IQCF3P0C7M6 154 aa23.37■■□□□ 1.33
UBE2D4-205ENST00000443780 OTOP2Q7RTS6 562 aa23.37■■□□□ 1.33
UBE2D4-205ENST00000443780 CCDC155Q8N6L0 562 aa23.37■■□□□ 1.33
UBE2D4-205ENST00000443780 GIMAP8Q8ND71 665 aaPredicted RBP23.37■■□□□ 1.33
UBE2D4-205ENST00000443780 CAGE1Q8TC20 777 aa23.37■■□□□ 1.33
UBE2D4-205ENST00000443780 GPR20Q99678 358 aa23.37■■□□□ 1.33
UBE2D4-205ENST00000443780 TM6SF1Q9BZW5 370 aa23.37■■□□□ 1.33
UBE2D4-205ENST00000443780 GLT8D2Q9H1C3 349 aa23.37■■□□□ 1.33
UBE2D4-205ENST00000443780 MTIF3Q9H2K0 278 aaKnown RBP23.37■■□□□ 1.33
UBE2D4-205ENST00000443780 SEMA6BQ9H3T3 888 aa23.37■■□□□ 1.33
UBE2D4-205ENST00000443780 CXXC1Q9P0U4 656 aaPredicted RBP23.37■■□□□ 1.33
UBE2D4-205ENST00000443780 CYP46A1Q9Y6A2 500 aa23.37■■□□□ 1.33
UBE2D4-205ENST00000443780 H3BRB1 525 aa23.36■■□□□ 1.33
UBE2D4-205ENST00000443780 PRPF3O43395 683 aaKnown RBP23.36■■□□□ 1.33
UBE2D4-205ENST00000443780 ATP9AO75110 1047 aa23.36■■□□□ 1.33
UBE2D4-205ENST00000443780 PFKMP08237 780 aa23.36■■□□□ 1.33
UBE2D4-205ENST00000443780 SCG2P13521 617 aa23.36■■□□□ 1.33
UBE2D4-205ENST00000443780 PDIA3P30101 505 aaKnown RBP23.36■■□□□ 1.33
UBE2D4-205ENST00000443780 RFC2P35250 354 aa23.36■■□□□ 1.33
UBE2D4-205ENST00000443780 TOB2Q14106 344 aaPredicted RBP23.36■■□□□ 1.33
UBE2D4-205ENST00000443780 DEFB128Q7Z7B8 93 aa23.36■■□□□ 1.33
UBE2D4-205ENST00000443780 GUCD1Q96NT3 240 aa23.36■■□□□ 1.33
UBE2D4-205ENST00000443780 TUT1Q9H6E5 874 aaKnown RBP23.36■■□□□ 1.33
UBE2D4-205ENST00000443780 STXBP5LQ9Y2K9 1186 aa23.36■■□□□ 1.33
UBE2D4-205ENST00000443780 TELO2Q9Y4R8 837 aa23.36■■□□□ 1.33
UBE2D4-205ENST00000443780 GRXCR1A8MXD5 290 aa23.35■■□□□ 1.33
UBE2D4-205ENST00000443780 KCNA2P16389 499 aa23.35■■□□□ 1.33
UBE2D4-205ENST00000443780 MTMR1Q13613 665 aa23.35■■□□□ 1.33
UBE2D4-205ENST00000443780 NTRK3Q16288 839 aa23.35■■□□□ 1.33
UBE2D4-205ENST00000443780 AFAP1L1Q8TED9 768 aa23.35■■□□□ 1.33
UBE2D4-205ENST00000443780 DHX38Q92620 1227 aaKnown RBP23.35■■□□□ 1.33
UBE2D4-205ENST00000443780 PGBD1Q96JS3 809 aa23.35■■□□□ 1.33
UBE2D4-205ENST00000443780 ANO3Q9BYT9 981 aa23.35■■□□□ 1.33
UBE2D4-205ENST00000443780 TTYH1Q9H313 450 aaPredicted RBP23.35■■□□□ 1.33
UBE2D4-205ENST00000443780 JADE2Q9NQC1 790 aa23.35■■□□□ 1.33
UBE2D4-205ENST00000443780 TMEM265A0A087WTH1 108 aa23.34■■□□□ 1.33
UBE2D4-205ENST00000443780 MAFGO15525 162 aa23.34■■□□□ 1.33
UBE2D4-205ENST00000443780 DNAJB2P25686 324 aa23.34■■□□□ 1.33
UBE2D4-205ENST00000443780 CLK2P49760 499 aaKnown RBP23.34■■□□□ 1.33
UBE2D4-205ENST00000443780 ZNF200P98182 395 aaPredicted RBP23.34■■□□□ 1.33
UBE2D4-205ENST00000443780 SP4Q02446 784 aa23.34■■□□□ 1.33
UBE2D4-205ENST00000443780 RBL2Q08999 1139 aa23.34■■□□□ 1.33
UBE2D4-205ENST00000443780 HIC1Q14526 733 aa23.34■■□□□ 1.33
UBE2D4-205ENST00000443780 PKN1Q16512 942 aa23.34■■□□□ 1.33
UBE2D4-205ENST00000443780 PHKBQ93100 1093 aa23.34■■□□□ 1.33
UBE2D4-205ENST00000443780 TMEM260Q9NX78 707 aa23.34■■□□□ 1.33
UBE2D4-205ENST00000443780 COL6A3P12111 3177 aa23.33■■□□□ 1.33
UBE2D4-205ENST00000443780 CCT2P78371 535 aaKnown RBP23.33■■□□□ 1.33
UBE2D4-205ENST00000443780 PTK7Q13308 1070 aa23.33■■□□□ 1.33
UBE2D4-205ENST00000443780 AP3B2Q13367 1082 aa23.33■■□□□ 1.33
UBE2D4-205ENST00000443780 MXRA8Q9BRK3 442 aa23.33■■□□□ 1.33
UBE2D4-205ENST00000443780 UPF3BQ9BZI7 483 aaKnown RBP23.33■■□□□ 1.33
UBE2D4-205ENST00000443780 NCOA5Q9HCD5 579 aaKnown RBP23.33■■□□□ 1.33
UBE2D4-205ENST00000443780 ESYT2A0FGR8 921 aa23.32■■□□□ 1.32
UBE2D4-205ENST00000443780 CKBP12277 381 aa23.32■■□□□ 1.32
UBE2D4-205ENST00000443780 SELPP16109 830 aa23.32■■□□□ 1.32
UBE2D4-205ENST00000443780 IFNAR1P17181 557 aa23.32■■□□□ 1.32
UBE2D4-205ENST00000443780 AKAP17AQ02040 695 aaKnown RBP23.32■■□□□ 1.32
UBE2D4-205ENST00000443780 UTP14CQ5TAP6 766 aaKnown RBP23.32■■□□□ 1.32
UBE2D4-205ENST00000443780 TRIM50Q86XT4 487 aa23.32■■□□□ 1.32
UBE2D4-205ENST00000443780 CCDC12Q8WUD4 166 aaPredicted RBP23.32■■□□□ 1.32
UBE2D4-205ENST00000443780 RNF26Q9BY78 433 aaPredicted RBP23.32■■□□□ 1.32
UBE2D4-205ENST00000443780 PBX4Q9BYU1 374 aa23.32■■□□□ 1.32
UBE2D4-205ENST00000443780 ZMYND12Q9H0C1 365 aa23.32■■□□□ 1.32
UBE2D4-205ENST00000443780 PKD2L1Q9P0L9 805 aa23.32■■□□□ 1.32
UBE2D4-205ENST00000443780 SLC4A7Q9Y6M7 1214 aa23.32■■□□□ 1.32
UBE2D4-205ENST00000443780 C17orf102A2RUQ5 167 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 PPFIA3O75145 1194 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 SMIM10L2AP0DMW4 78 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 SMIM10L2BP0DMW5 78 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 ACTN1P12814 892 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 HOXC8P31273 242 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 SREBF1P36956 1147 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 PBX2P40425 430 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 TRIM71Q2Q1W2 868 aaKnown RBP23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 JAKMIP3Q5VZ66 844 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 LRRC8DQ7L1W4 858 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 CYP2W1Q8TAV3 490 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 WNT8BQ93098 351 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 TIFAQ96CG3 184 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 CDX2Q99626 313 aaPredicted RBP23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 RNPEPQ9H4A4 650 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 C6orf50Q9HD87 102 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 KCNH7Q9NS40 1196 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 ZNF215Q9UL58 517 aaPredicted RBP23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 PTPRSQ13332 1948 aa23.31■■□□□ 1.32
UBE2D4-205ENST00000443780 GSTTP1A0A1W2PQM5 241 aa23.3■■□□□ 1.32
UBE2D4-205ENST00000443780 ZBBXA8MT70 800 aa23.3■■□□□ 1.32
UBE2D4-205ENST00000443780 TCF7P36402 384 aaPredicted RBP23.3■■□□□ 1.32
UBE2D4-205ENST00000443780 GPNMBQ14956 572 aa23.3■■□□□ 1.32
UBE2D4-205ENST00000443780 CEP55Q53EZ4 464 aa23.3■■□□□ 1.32
UBE2D4-205ENST00000443780 SERINC5Q86VE9 423 aa23.3■■□□□ 1.32
UBE2D4-205ENST00000443780 SEPT1Q8WYJ6 367 aa23.3■■□□□ 1.32
UBE2D4-205ENST00000443780 ZNF274Q96GC6 653 aaPredicted RBP23.3■■□□□ 1.32
UBE2D4-205ENST00000443780 SLC26A6Q9BXS9 759 aa23.3■■□□□ 1.32
UBE2D4-205ENST00000443780 FTOQ9C0B1 505 aaKnown RBP eCLIP23.3■■□□□ 1.32
UBE2D4-205ENST00000443780 PARNO95453 639 aaKnown RBP23.29■■□□□ 1.32
UBE2D4-205ENST00000443780 ATP6V0A1Q93050 837 aa23.29■■□□□ 1.32
UBE2D4-205ENST00000443780 LARP6Q9BRS8 491 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms