RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 H3BRB1 525 aa23■■□□□ 1.27
LRCH3-208ENST00000443727 EPB41L2O43491 1005 aaKnown RBP23■■□□□ 1.27
LRCH3-208ENST00000443727 LGALS2P05162 132 aa23■■□□□ 1.27
LRCH3-208ENST00000443727 CENPBP07199 599 aaPredicted RBP23■■□□□ 1.27
LRCH3-208ENST00000443727 GLT8D2Q9H1C3 349 aa23■■□□□ 1.27
LRCH3-208ENST00000443727 TUT1Q9H6E5 874 aaKnown RBP23■■□□□ 1.27
LRCH3-208ENST00000443727 BARHL2Q9NY43 387 aa23■■□□□ 1.27
LRCH3-208ENST00000443727 STXBP3O00186 592 aa22.99■■□□□ 1.27
LRCH3-208ENST00000443727 SELPP16109 830 aa22.99■■□□□ 1.27
LRCH3-208ENST00000443727 ITGB5P18084 799 aa22.99■■□□□ 1.27
LRCH3-208ENST00000443727 PBX2P40425 430 aa22.99■■□□□ 1.27
LRCH3-208ENST00000443727 AKAP17AQ02040 695 aaKnown RBP22.99■■□□□ 1.27
LRCH3-208ENST00000443727 PTK7Q13308 1070 aa22.99■■□□□ 1.27
LRCH3-208ENST00000443727 MTMR1Q13613 665 aa22.99■■□□□ 1.27
LRCH3-208ENST00000443727 RAB30Q15771 203 aa22.99■■□□□ 1.27
LRCH3-208ENST00000443727 UTP14CQ5TAP6 766 aaKnown RBP22.99■■□□□ 1.27
LRCH3-208ENST00000443727 TYW1BQ6NUM6 668 aa22.99■■□□□ 1.27
LRCH3-208ENST00000443727 TEX2Q8IWB9 1127 aa22.99■■□□□ 1.27
LRCH3-208ENST00000443727 SLC17A8Q8NDX2 589 aa22.99■■□□□ 1.27
LRCH3-208ENST00000443727 CTAGE1Q96RT6 745 aa22.99■■□□□ 1.27
LRCH3-208ENST00000443727 GPR20Q99678 358 aa22.99■■□□□ 1.27
LRCH3-208ENST00000443727 PBX4Q9BYU1 374 aa22.99■■□□□ 1.27
LRCH3-208ENST00000443727 PKD2L1Q9P0L9 805 aa22.99■■□□□ 1.27
LRCH3-208ENST00000443727 ZNF215Q9UL58 517 aaPredicted RBP22.99■■□□□ 1.27
LRCH3-208ENST00000443727 C17orf102A2RUQ5 167 aa22.98■■□□□ 1.27
LRCH3-208ENST00000443727 FOSP01100 380 aaPredicted RBP22.98■■□□□ 1.27
LRCH3-208ENST00000443727 ZNF200P98182 395 aaPredicted RBP22.98■■□□□ 1.27
LRCH3-208ENST00000443727 LRRC8DQ7L1W4 858 aa22.98■■□□□ 1.27
LRCH3-208ENST00000443727 UBIAD1Q9Y5Z9 338 aa22.98■■□□□ 1.27
LRCH3-208ENST00000443727 CYP46A1Q9Y6A2 500 aa22.98■■□□□ 1.27
LRCH3-208ENST00000443727 SCG2P13521 617 aa22.97■■□□□ 1.27
LRCH3-208ENST00000443727 ATP2A2P16615 1042 aaKnown RBP22.97■■□□□ 1.27
LRCH3-208ENST00000443727 PFKFB3Q16875 520 aaPredicted RBP22.97■■□□□ 1.27
LRCH3-208ENST00000443727 RUFY3Q7L099 469 aa22.97■■□□□ 1.27
LRCH3-208ENST00000443727 FBXL16Q8N461 479 aa22.97■■□□□ 1.27
LRCH3-208ENST00000443727 MYLIPQ8WY64 445 aa22.97■■□□□ 1.27
LRCH3-208ENST00000443727 DHX38Q92620 1227 aaKnown RBP22.97■■□□□ 1.27
LRCH3-208ENST00000443727 VWCEQ96DN2 955 aa22.97■■□□□ 1.27
LRCH3-208ENST00000443727 PGBD1Q96JS3 809 aa22.97■■□□□ 1.27
LRCH3-208ENST00000443727 ZNF576Q9H609 170 aa22.97■■□□□ 1.27
LRCH3-208ENST00000443727 JADE2Q9NQC1 790 aa22.97■■□□□ 1.27
LRCH3-208ENST00000443727 MAFGO15525 162 aa22.96■■□□□ 1.27
LRCH3-208ENST00000443727 PARNO95453 639 aaKnown RBP22.96■■□□□ 1.27
LRCH3-208ENST00000443727 SMIM10L2AP0DMW4 78 aa22.96■■□□□ 1.27
LRCH3-208ENST00000443727 SMIM10L2BP0DMW5 78 aa22.96■■□□□ 1.27
LRCH3-208ENST00000443727 CKBP12277 381 aa22.96■■□□□ 1.27
LRCH3-208ENST00000443727 KCNA2P16389 499 aa22.96■■□□□ 1.27
LRCH3-208ENST00000443727 TRIM50Q86XT4 487 aa22.96■■□□□ 1.27
LRCH3-208ENST00000443727 CCDC12Q8WUD4 166 aaPredicted RBP22.96■■□□□ 1.27
LRCH3-208ENST00000443727 ATP6V0A1Q93050 837 aa22.96■■□□□ 1.27
LRCH3-208ENST00000443727 ANO3Q9BYT9 981 aa22.96■■□□□ 1.27
LRCH3-208ENST00000443727 ATP9AO75110 1047 aa22.95■■□□□ 1.26
LRCH3-208ENST00000443727 FOSL2P15408 326 aa22.95■■□□□ 1.26
LRCH3-208ENST00000443727 AP3B2Q13367 1082 aa22.95■■□□□ 1.26
LRCH3-208ENST00000443727 AGXT2Q9BYV1 514 aa22.95■■□□□ 1.26
LRCH3-208ENST00000443727 ZSWIM6Q9HCJ5 1215 aa22.95■■□□□ 1.26
LRCH3-208ENST00000443727 TMEM260Q9NX78 707 aa22.95■■□□□ 1.26
LRCH3-208ENST00000443727 PRPF3O43395 683 aaKnown RBP22.94■■□□□ 1.26
LRCH3-208ENST00000443727 GNAT1P11488 350 aa22.94■■□□□ 1.26
LRCH3-208ENST00000443727 TCF7P36402 384 aaPredicted RBP22.94■■□□□ 1.26
LRCH3-208ENST00000443727 ZNF76P36508 570 aa22.94■■□□□ 1.26
LRCH3-208ENST00000443727 THPOP40225 353 aa22.94■■□□□ 1.26
LRCH3-208ENST00000443727 RABGGTBP53611 331 aa22.94■■□□□ 1.26
LRCH3-208ENST00000443727 CCT2P78371 535 aaKnown RBP22.94■■□□□ 1.26
LRCH3-208ENST00000443727 RBL2Q08999 1139 aa22.94■■□□□ 1.26
LRCH3-208ENST00000443727 GRIN2CQ14957 1233 aa22.94■■□□□ 1.26
LRCH3-208ENST00000443727 PHKBQ93100 1093 aa22.94■■□□□ 1.26
LRCH3-208ENST00000443727 MXRA8Q9BRK3 442 aa22.94■■□□□ 1.26
LRCH3-208ENST00000443727 NKX2-4Q9H2Z4 354 aa22.94■■□□□ 1.26
LRCH3-208ENST00000443727 SLC28A3Q9HAS3 691 aa22.94■■□□□ 1.26
LRCH3-208ENST00000443727 C6orf50Q9HD87 102 aa22.94■■□□□ 1.26
LRCH3-208ENST00000443727 TELO2Q9Y4R8 837 aa22.94■■□□□ 1.26
LRCH3-208ENST00000443727 NID2Q14112 1375 aa22.93■■□□□ 1.26
LRCH3-208ENST00000443727 PPFIA3O75145 1194 aa22.93■■□□□ 1.26
LRCH3-208ENST00000443727 PDIA3P30101 505 aaKnown RBP22.93■■□□□ 1.26
LRCH3-208ENST00000443727 HIC1Q14526 733 aa22.93■■□□□ 1.26
LRCH3-208ENST00000443727 ZNF618Q5T7W0 954 aa22.93■■□□□ 1.26
LRCH3-208ENST00000443727 JAKMIP3Q5VZ66 844 aa22.93■■□□□ 1.26
LRCH3-208ENST00000443727 SERINC5Q86VE9 423 aa22.93■■□□□ 1.26
LRCH3-208ENST00000443727 SEPT1Q8WYJ6 367 aa22.93■■□□□ 1.26
LRCH3-208ENST00000443727 SLC26A6Q9BXS9 759 aa22.93■■□□□ 1.26
LRCH3-208ENST00000443727 RNPEPQ9H4A4 650 aa22.93■■□□□ 1.26
LRCH3-208ENST00000443727 KCNH7Q9NS40 1196 aa22.93■■□□□ 1.26
LRCH3-208ENST00000443727 SETD4Q9NVD3 440 aa22.93■■□□□ 1.26
LRCH3-208ENST00000443727 COL6A3P12111 3177 aa22.93■■□□□ 1.26
LRCH3-208ENST00000443727 SCN5AQ14524 2016 aa22.92■■□□□ 1.26
LRCH3-208ENST00000443727 KCNJ6P48051 423 aa22.92■■□□□ 1.26
LRCH3-208ENST00000443727 CEP55Q53EZ4 464 aa22.92■■□□□ 1.26
LRCH3-208ENST00000443727 MAFAQ8NHW3 353 aaPredicted RBP22.92■■□□□ 1.26
LRCH3-208ENST00000443727 GLG1Q92896 1179 aa22.92■■□□□ 1.26
LRCH3-208ENST00000443727 WNT8BQ93098 351 aa22.92■■□□□ 1.26
LRCH3-208ENST00000443727 SLC9A7Q96T83 725 aa22.92■■□□□ 1.26
LRCH3-208ENST00000443727 SDF4Q9BRK5 362 aa22.92■■□□□ 1.26
LRCH3-208ENST00000443727 UPF3BQ9BZI7 483 aaKnown RBP22.92■■□□□ 1.26
LRCH3-208ENST00000443727 TM6SF1Q9BZW5 370 aa22.92■■□□□ 1.26
LRCH3-208ENST00000443727 NCOA5Q9HCD5 579 aaKnown RBP22.92■■□□□ 1.26
LRCH3-208ENST00000443727 JPH1Q9HDC5 661 aaPredicted RBP22.92■■□□□ 1.26
LRCH3-208ENST00000443727 TREHO43280 583 aa22.91■■□□□ 1.26
LRCH3-208ENST00000443727 BAIAP3O94812 1187 aa22.91■■□□□ 1.26
LRCH3-208ENST00000443727 GNA11P29992 359 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms