RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 MAFGO15525 162 aa18.21■□□□□ 0.51
USP39-205ENST00000442708 DHX15O43143 795 aaKnown RBP18.21■□□□□ 0.51
USP39-205ENST00000442708 SLC37A4O43826 429 aa18.21■□□□□ 0.51
USP39-205ENST00000442708 U2AF2P26368 475 aaKnown RBP eCLIP18.21■□□□□ 0.51
USP39-205ENST00000442708 CPT1AP50416 773 aa18.21■□□□□ 0.51
USP39-205ENST00000442708 NEDD9Q14511 834 aa18.21■□□□□ 0.51
USP39-205ENST00000442708 SAFBQ15424 915 aaKnown RBP eCLIP18.21■□□□□ 0.51
USP39-205ENST00000442708 LETM2Q2VYF4 491 aa18.21■□□□□ 0.51
USP39-205ENST00000442708 LARP1BQ659C4 914 aaKnown RBP18.21■□□□□ 0.51
USP39-205ENST00000442708 CXCL17Q6UXB2 119 aa18.21■□□□□ 0.51
USP39-205ENST00000442708 PCSK9Q8NBP7 692 aaKnown RBP18.21■□□□□ 0.51
USP39-205ENST00000442708 PPTC7Q8NI37 304 aa18.21■□□□□ 0.51
USP39-205ENST00000442708 GJA10Q969M2 543 aa18.21■□□□□ 0.51
USP39-205ENST00000442708 SPATA33Q96N06 139 aa18.21■□□□□ 0.51
USP39-205ENST00000442708 MLXIPQ9HAP2 919 aa18.21■□□□□ 0.51
USP39-205ENST00000442708 MOXD2PA6NHM9 499 aa18.2■□□□□ 0.5
USP39-205ENST00000442708 MSH4O15457 936 aa18.2■□□□□ 0.5
USP39-205ENST00000442708 MYL3P08590 195 aa18.2■□□□□ 0.5
USP39-205ENST00000442708 HOXD8P13378 290 aaPredicted RBP18.2■□□□□ 0.5
USP39-205ENST00000442708 PURAQ00577 322 aaKnown RBP18.2■□□□□ 0.5
USP39-205ENST00000442708 SP4Q02446 784 aa18.2■□□□□ 0.5
USP39-205ENST00000442708 Q4G0T1 1027 aa18.2■□□□□ 0.5
USP39-205ENST00000442708 METTL7BQ6UX53 244 aa18.2■□□□□ 0.5
USP39-205ENST00000442708 NOSTRINQ8IVI9 506 aa18.2■□□□□ 0.5
USP39-205ENST00000442708 SPRYD3Q8NCJ5 442 aa18.2■□□□□ 0.5
USP39-205ENST00000442708 GPR20Q99678 358 aa18.2■□□□□ 0.5
USP39-205ENST00000442708 SCN10AQ9Y5Y9 1956 aa18.2■□□□□ 0.5
USP39-205ENST00000442708 IPO5O00410 1097 aaKnown RBP18.19■□□□□ 0.5
USP39-205ENST00000442708 ATN1P54259 1190 aaPredicted RBP18.19■□□□□ 0.5
USP39-205ENST00000442708 SETQ01105 290 aaPredicted RBP18.19■□□□□ 0.5
USP39-205ENST00000442708 LRRC26Q2I0M4 334 aa18.19■□□□□ 0.5
USP39-205ENST00000442708 MOXD1Q6UVY6 613 aa18.19■□□□□ 0.5
USP39-205ENST00000442708 PPP1R13LQ8WUF5 828 aa18.19■□□□□ 0.5
USP39-205ENST00000442708 ZNF577Q9BSK1 485 aa18.19■□□□□ 0.5
USP39-205ENST00000442708 GRIN2DO15399 1336 aa18.19■□□□□ 0.5
USP39-205ENST00000442708 NFASCO94856 1347 aa18.19■□□□□ 0.5
USP39-205ENST00000442708 WDR81Q562E7 1941 aa18.18■□□□□ 0.5
USP39-205ENST00000442708 GSTTP1A0A1W2PQM5 241 aa18.18■□□□□ 0.5
USP39-205ENST00000442708 H3BQV1 296 aa18.18■□□□□ 0.5
USP39-205ENST00000442708 CCNT1O60563 726 aaKnown RBP18.18■□□□□ 0.5
USP39-205ENST00000442708 CCNE2O96020 404 aa18.18■□□□□ 0.5
USP39-205ENST00000442708 SYT1P21579 422 aa18.18■□□□□ 0.5
USP39-205ENST00000442708 PSMC6P62333 389 aa18.18■□□□□ 0.5
USP39-205ENST00000442708 MCTP1Q6DN14 999 aa18.18■□□□□ 0.5
USP39-205ENST00000442708 PPP4R3AQ6IN85 833 aa18.18■□□□□ 0.5
USP39-205ENST00000442708 SLC39A5Q6ZMH5 540 aa18.18■□□□□ 0.5
USP39-205ENST00000442708 ETNPPLQ8TBG4 499 aa18.18■□□□□ 0.5
USP39-205ENST00000442708 KAT2BQ92831 832 aa18.18■□□□□ 0.5
USP39-205ENST00000442708 DDX25Q9UHL0 483 aaKnown RBP18.18■□□□□ 0.5
USP39-205ENST00000442708 DDX39AO00148 427 aaKnown RBP18.17■□□□□ 0.5
USP39-205ENST00000442708 ZEB2O60315 1214 aa18.17■□□□□ 0.5
USP39-205ENST00000442708 ZNF286BP0CG31 522 aa18.17■□□□□ 0.5
USP39-205ENST00000442708 ATP2B1P20020 1258 aa18.17■□□□□ 0.5
USP39-205ENST00000442708 TOB1P50616 345 aaPredicted RBP18.17■□□□□ 0.5
USP39-205ENST00000442708 NBR1Q14596 966 aa18.17■□□□□ 0.5
USP39-205ENST00000442708 DGKDQ16760 1214 aa18.17■□□□□ 0.5
USP39-205ENST00000442708 GIMAP8Q8ND71 665 aaPredicted RBP18.17■□□□□ 0.5
USP39-205ENST00000442708 SLC5A5Q92911 643 aa18.17■□□□□ 0.5
USP39-205ENST00000442708 JPH1Q9HDC5 661 aaPredicted RBP18.17■□□□□ 0.5
USP39-205ENST00000442708 POLR3EQ9NVU0 708 aa18.17■□□□□ 0.5
USP39-205ENST00000442708 SLC9A2Q9UBY0 812 aa18.17■□□□□ 0.5
USP39-205ENST00000442708 GCFC2P16383 781 aaKnown RBP18.16■□□□□ 0.5
USP39-205ENST00000442708 GNL2Q13823 731 aaKnown RBP18.16■□□□□ 0.5
USP39-205ENST00000442708 BRDTQ58F21 947 aaPredicted RBP18.16■□□□□ 0.5
USP39-205ENST00000442708 PRPF38BQ5VTL8 546 aaKnown RBP18.16■□□□□ 0.5
USP39-205ENST00000442708 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
USP39-205ENST00000442708 HAS1Q92839 578 aa18.16■□□□□ 0.5
USP39-205ENST00000442708 GLT1D1Q96MS3 346 aa18.16■□□□□ 0.5
USP39-205ENST00000442708 SDF4Q9BRK5 362 aa18.16■□□□□ 0.5
USP39-205ENST00000442708 C16orf70Q9BSU1 422 aa18.16■□□□□ 0.5
USP39-205ENST00000442708 MTG1Q9BT17 334 aaPredicted RBP18.16■□□□□ 0.5
USP39-205ENST00000442708 KCNMB3Q9NPA1 279 aa18.16■□□□□ 0.5
USP39-205ENST00000442708 STARD7Q9NQZ5 370 aa18.16■□□□□ 0.5
USP39-205ENST00000442708 ELP1O95163 1332 aa18.16■□□□□ 0.5
USP39-205ENST00000442708 VPS37CA5D8V6 355 aaPredicted RBP18.15■□□□□ 0.5
USP39-205ENST00000442708 NOP56O00567 594 aaKnown RBP18.15■□□□□ 0.5
USP39-205ENST00000442708 KPNA6O60684 536 aa18.15■□□□□ 0.5
USP39-205ENST00000442708 PPFIA4O75335 1185 aa18.15■□□□□ 0.5
USP39-205ENST00000442708 PSMD10O75832 226 aa18.15■□□□□ 0.5
USP39-205ENST00000442708 LGALS2P05162 132 aa18.15■□□□□ 0.5
USP39-205ENST00000442708 ACTR2P61160 394 aa18.15■□□□□ 0.5
USP39-205ENST00000442708 SNX17Q15036 470 aa18.15■□□□□ 0.5
USP39-205ENST00000442708 TRIM50Q86XT4 487 aa18.15■□□□□ 0.5
USP39-205ENST00000442708 SLC43A3Q8NBI5 491 aa18.15■□□□□ 0.5
USP39-205ENST00000442708 SEPT1Q8WYJ6 367 aa18.15■□□□□ 0.5
USP39-205ENST00000442708 VTI1AQ96AJ9 217 aa18.15■□□□□ 0.5
USP39-205ENST00000442708 PCYT2Q99447 389 aa18.15■□□□□ 0.5
USP39-205ENST00000442708 MTMR6Q9Y217 621 aa18.15■□□□□ 0.5
USP39-205ENST00000442708 CABYRO75952 493 aa18.14■□□□□ 0.49
USP39-205ENST00000442708 F2P00734 622 aa18.14■□□□□ 0.49
USP39-205ENST00000442708 HSP90AA1P07900 732 aaKnown RBP18.14■□□□□ 0.49
USP39-205ENST00000442708 PDCP20941 246 aa18.14■□□□□ 0.49
USP39-205ENST00000442708 TCF7P36402 384 aaPredicted RBP18.14■□□□□ 0.49
USP39-205ENST00000442708 CDK7P50613 346 aa18.14■□□□□ 0.49
USP39-205ENST00000442708 ITGA7Q13683 1181 aa18.14■□□□□ 0.49
USP39-205ENST00000442708 ZNF174Q15697 407 aa18.14■□□□□ 0.49
USP39-205ENST00000442708 NBPF20Q3BBV1 942 aa18.14■□□□□ 0.49
USP39-205ENST00000442708 TRIM60Q495X7 471 aa18.14■□□□□ 0.49
USP39-205ENST00000442708 FERMT3Q86UX7 667 aa18.14■□□□□ 0.49
USP39-205ENST00000442708 RIT2Q99578 217 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms