RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 TLE2Q04725 743 aa17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 PTPN11Q06124 597 aaPredicted RBP17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 TRIM29Q14134 588 aa17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 NONOQ15233 471 aaKnown RBP eCLIP17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 NFRKBQ6P4R8 1299 aa17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 MOXD1Q6UVY6 613 aa17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 CYP2W1Q8TAV3 490 aa17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 TBCKQ8TEA7 893 aa17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 LTBP2Q14767 1821 aa17.11■□□□□ 0.33
CSNK1E-210ENST00000442216 CCDC194A0A1B0GVG4 234 aa17.1■□□□□ 0.33
CSNK1E-210ENST00000442216 H0YGN5 161 aa17.1■□□□□ 0.33
CSNK1E-210ENST00000442216 TLR3O15455 904 aaKnown RBP17.1■□□□□ 0.33
CSNK1E-210ENST00000442216 F2P00734 622 aa17.1■□□□□ 0.33
CSNK1E-210ENST00000442216 MMP1P03956 469 aa17.1■□□□□ 0.33
CSNK1E-210ENST00000442216 KRT2P35908 639 aa17.1■□□□□ 0.33
CSNK1E-210ENST00000442216 PLA2G4DQ86XP0 818 aa17.1■□□□□ 0.33
CSNK1E-210ENST00000442216 FAM126BQ8IXS8 530 aa17.1■□□□□ 0.33
CSNK1E-210ENST00000442216 GPR20Q99678 358 aa17.1■□□□□ 0.33
CSNK1E-210ENST00000442216 AGO4Q9HCK5 861 aaKnown RBP17.1■□□□□ 0.33
CSNK1E-210ENST00000442216 GJB4Q9NTQ9 266 aa17.1■□□□□ 0.33
CSNK1E-210ENST00000442216 PRKAG2Q9UGJ0 569 aa17.1■□□□□ 0.33
CSNK1E-210ENST00000442216 GRIN2DO15399 1336 aa17.1■□□□□ 0.33
CSNK1E-210ENST00000442216 MYH9P35579 1960 aaKnown RBP17.09■□□□□ 0.33
CSNK1E-210ENST00000442216 CYP3A7-CYP3A51PA0A087WV96 503 aa17.09■□□□□ 0.33
CSNK1E-210ENST00000442216 DTNBO60941 627 aa17.09■□□□□ 0.33
CSNK1E-210ENST00000442216 CLTBP09497 229 aa17.09■□□□□ 0.33
CSNK1E-210ENST00000442216 ARP10275 920 aa17.09■□□□□ 0.33
CSNK1E-210ENST00000442216 CYP3A7P24462 503 aa17.09■□□□□ 0.33
CSNK1E-210ENST00000442216 PSMC6P62333 389 aa17.09■□□□□ 0.33
CSNK1E-210ENST00000442216 KRT40Q6A162 431 aa17.09■□□□□ 0.33
CSNK1E-210ENST00000442216 SESTD1Q86VW0 696 aa17.09■□□□□ 0.33
CSNK1E-210ENST00000442216 FAM184AQ8NB25 1140 aa17.09■□□□□ 0.33
CSNK1E-210ENST00000442216 KAT2BQ92831 832 aa17.09■□□□□ 0.33
CSNK1E-210ENST00000442216 SDF4Q9BRK5 362 aa17.09■□□□□ 0.33
CSNK1E-210ENST00000442216 BCAS3Q9H6U6 928 aa17.09■□□□□ 0.33
CSNK1E-210ENST00000442216 KIF3AQ9Y496 699 aa17.09■□□□□ 0.33
CSNK1E-210ENST00000442216 HAS3O00219 553 aa17.08■□□□□ 0.32
CSNK1E-210ENST00000442216 EDIL3O43854 480 aa17.08■□□□□ 0.32
CSNK1E-210ENST00000442216 PQBP1O60828 265 aaKnown RBP17.08■□□□□ 0.32
CSNK1E-210ENST00000442216 CD4P01730 458 aa17.08■□□□□ 0.32
CSNK1E-210ENST00000442216 FAAP100Q0VG06 881 aa17.08■□□□□ 0.32
CSNK1E-210ENST00000442216 NBPF20Q3BBV1 942 aa17.08■□□□□ 0.32
CSNK1E-210ENST00000442216 SEPT1Q8WYJ6 367 aa17.08■□□□□ 0.32
CSNK1E-210ENST00000442216 C8orf76Q96K31 380 aa17.08■□□□□ 0.32
CSNK1E-210ENST00000442216 NAP1L4Q99733 375 aaKnown RBP17.08■□□□□ 0.32
CSNK1E-210ENST00000442216 C16orf70Q9BSU1 422 aa17.08■□□□□ 0.32
CSNK1E-210ENST00000442216 JPH1Q9HDC5 661 aaPredicted RBP17.08■□□□□ 0.32
CSNK1E-210ENST00000442216 PDLIM7Q9NR12 457 aa17.08■□□□□ 0.32
CSNK1E-210ENST00000442216 TBC1D22BQ9NU19 505 aa17.08■□□□□ 0.32
CSNK1E-210ENST00000442216 SLC9A2Q9UBY0 812 aa17.08■□□□□ 0.32
CSNK1E-210ENST00000442216 TRIP12Q14669 1992 aaPredicted RBP17.08■□□□□ 0.32
CSNK1E-210ENST00000442216 IPO5O00410 1097 aaKnown RBP17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 KIAA0355O15063 1070 aa17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 SORBS3O60504 671 aa17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 LGALS2P05162 132 aa17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 SUPT20HL2P0C7V6 817 aa17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 GCFC2P16383 781 aaKnown RBP17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 PSEN2P49810 448 aa17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 SAFBQ15424 915 aaKnown RBP eCLIP17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 INF2Q27J81 1249 aa17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 Q4G0T1 1027 aa17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 PRR16Q569H4 304 aa17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 FBXO18Q8NFZ0 1043 aa17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 OXER1Q8TDS5 423 aa17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 TNFRSF25Q93038 417 aa17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 LENG9Q96B70 501 aa17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 MBOAT7Q96N66 472 aa17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 ZMYND8Q9ULU4 1186 aaPredicted RBP17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 CEP290O15078 2479 aa17.07■□□□□ 0.32
CSNK1E-210ENST00000442216 GSTTP1A0A1W2PQM5 241 aa17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 H3BRB1 525 aa17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 ZNF286BP0CG31 522 aa17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 ITGB3BPQ13352 177 aaPredicted RBP17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 MFSD10Q14728 455 aa17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 PPP4R3AQ6IN85 833 aa17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 PIK3AP1Q6ZUJ8 805 aa17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 NEK8Q86SG6 692 aa17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 DIS3L2Q8IYB7 885 aaKnown RBP17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 ZNF577Q9BSK1 485 aa17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 TUT1Q9H6E5 874 aaKnown RBP17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 TMEM39AQ9NV64 488 aa17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 PKD2L1Q9P0L9 805 aa17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 TBX21Q9UL17 535 aa17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 ZNF215Q9UL58 517 aaPredicted RBP17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 DNAH12Q6ZR08 3092 aa17.06■□□□□ 0.32
CSNK1E-210ENST00000442216 EMSYQ7Z589 1322 aa17.05■□□□□ 0.32
CSNK1E-210ENST00000442216 BTBD18B2RXH4 712 aa17.05■□□□□ 0.32
CSNK1E-210ENST00000442216 DHX15O43143 795 aaKnown RBP17.05■□□□□ 0.32
CSNK1E-210ENST00000442216 B4GALT4O60513 344 aa17.05■□□□□ 0.32
CSNK1E-210ENST00000442216 ATG7O95352 703 aa17.05■□□□□ 0.32
CSNK1E-210ENST00000442216 SYN1P17600 705 aa17.05■□□□□ 0.32
CSNK1E-210ENST00000442216 TCF7P36402 384 aaPredicted RBP17.05■□□□□ 0.32
CSNK1E-210ENST00000442216 NR5A1Q13285 461 aa17.05■□□□□ 0.32
CSNK1E-210ENST00000442216 KIAA0753Q2KHM9 967 aa17.05■□□□□ 0.32
CSNK1E-210ENST00000442216 RIT2Q99578 217 aa17.05■□□□□ 0.32
CSNK1E-210ENST00000442216 PRDM5Q9NQX1 630 aaPredicted RBP17.05■□□□□ 0.32
CSNK1E-210ENST00000442216 TRIM43BA6NCK2 446 aa17.04■□□□□ 0.32
CSNK1E-210ENST00000442216 LGR5O75473 907 aa17.04■□□□□ 0.32
CSNK1E-210ENST00000442216 KRT76Q01546 638 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms