RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 LGALS2P05162 132 aa21.71■■□□□ 1.07
HMGB3P22-201ENST00000442010 DNAJB2P25686 324 aa21.71■■□□□ 1.07
HMGB3P22-201ENST00000442010 RFC2P35250 354 aa21.71■■□□□ 1.07
HMGB3P22-201ENST00000442010 METAP2P50579 478 aaKnown RBP eCLIP21.71■■□□□ 1.07
HMGB3P22-201ENST00000442010 EVCP57679 992 aa21.71■■□□□ 1.07
HMGB3P22-201ENST00000442010 GPNMBQ14956 572 aa21.71■■□□□ 1.07
HMGB3P22-201ENST00000442010 NLRX1Q86UT6 975 aa21.71■■□□□ 1.07
HMGB3P22-201ENST00000442010 CDX2Q99626 313 aaPredicted RBP21.71■■□□□ 1.07
HMGB3P22-201ENST00000442010 BARHL2Q9NY43 387 aa21.71■■□□□ 1.07
HMGB3P22-201ENST00000442010 ATP9AO75110 1047 aa21.7■■□□□ 1.06
HMGB3P22-201ENST00000442010 KCNA2P16389 499 aa21.7■■□□□ 1.06
HMGB3P22-201ENST00000442010 PSMA5P28066 241 aa21.7■■□□□ 1.06
HMGB3P22-201ENST00000442010 HOXC8P31273 242 aa21.7■■□□□ 1.06
HMGB3P22-201ENST00000442010 PBX2P40425 430 aa21.7■■□□□ 1.06
HMGB3P22-201ENST00000442010 NAPAP54920 295 aa21.7■■□□□ 1.06
HMGB3P22-201ENST00000442010 FGD1P98174 961 aa21.7■■□□□ 1.06
HMGB3P22-201ENST00000442010 RETREG2Q8NC44 543 aa21.7■■□□□ 1.06
HMGB3P22-201ENST00000442010 AFAP1L1Q8TED9 768 aa21.7■■□□□ 1.06
HMGB3P22-201ENST00000442010 MTIF3Q9H2K0 278 aaKnown RBP21.7■■□□□ 1.06
HMGB3P22-201ENST00000442010 CCDC196A0A1B0GTZ2 297 aa21.69■■□□□ 1.06
HMGB3P22-201ENST00000442010 H3BRB1 525 aa21.69■■□□□ 1.06
HMGB3P22-201ENST00000442010 CLK2P49760 499 aaKnown RBP21.69■■□□□ 1.06
HMGB3P22-201ENST00000442010 ZNF200P98182 395 aaPredicted RBP21.69■■□□□ 1.06
HMGB3P22-201ENST00000442010 PFKFB3Q16875 520 aaPredicted RBP21.69■■□□□ 1.06
HMGB3P22-201ENST00000442010 TRIM71Q2Q1W2 868 aaKnown RBP21.69■■□□□ 1.06
HMGB3P22-201ENST00000442010 DEFB128Q7Z7B8 93 aa21.69■■□□□ 1.06
HMGB3P22-201ENST00000442010 WNT8BQ93098 351 aa21.69■■□□□ 1.06
HMGB3P22-201ENST00000442010 TUT1Q9H6E5 874 aaKnown RBP21.69■■□□□ 1.06
HMGB3P22-201ENST00000442010 ZSWIM6Q9HCJ5 1215 aa21.69■■□□□ 1.06
HMGB3P22-201ENST00000442010 SMCO2A6NFE2 343 aa21.68■■□□□ 1.06
HMGB3P22-201ENST00000442010 NOP56O00567 594 aaKnown RBP21.68■■□□□ 1.06
HMGB3P22-201ENST00000442010 PTK7Q13308 1070 aa21.68■■□□□ 1.06
HMGB3P22-201ENST00000442010 NTRK3Q16288 839 aa21.68■■□□□ 1.06
HMGB3P22-201ENST00000442010 PKN1Q16512 942 aa21.68■■□□□ 1.06
HMGB3P22-201ENST00000442010 TRAF7Q6Q0C0 670 aa21.68■■□□□ 1.06
HMGB3P22-201ENST00000442010 RUFY3Q7L099 469 aa21.68■■□□□ 1.06
HMGB3P22-201ENST00000442010 CCDC155Q8N6L0 562 aa21.68■■□□□ 1.06
HMGB3P22-201ENST00000442010 GIMAP8Q8ND71 665 aaPredicted RBP21.68■■□□□ 1.06
HMGB3P22-201ENST00000442010 TIFAQ96CG3 184 aa21.68■■□□□ 1.06
HMGB3P22-201ENST00000442010 CDHR1Q96JP9 859 aa21.68■■□□□ 1.06
HMGB3P22-201ENST00000442010 JADE2Q9NQC1 790 aa21.68■■□□□ 1.06
HMGB3P22-201ENST00000442010 NAP1L2Q9ULW6 460 aaPredicted RBP21.68■■□□□ 1.06
HMGB3P22-201ENST00000442010 CKBP12277 381 aa21.67■■□□□ 1.06
HMGB3P22-201ENST00000442010 SELPP16109 830 aa21.67■■□□□ 1.06
HMGB3P22-201ENST00000442010 ADCY7P51828 1080 aa21.67■■□□□ 1.06
HMGB3P22-201ENST00000442010 TOB2Q14106 344 aaPredicted RBP21.67■■□□□ 1.06
HMGB3P22-201ENST00000442010 PGBD1Q96JS3 809 aa21.67■■□□□ 1.06
HMGB3P22-201ENST00000442010 EYSQ5T1H1 3165 aa21.67■■□□□ 1.06
HMGB3P22-201ENST00000442010 MAFGO15525 162 aa21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 PRPF3O43395 683 aaKnown RBP21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 FOSP01100 380 aaPredicted RBP21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 SCG2P13521 617 aa21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 MTMR1Q13613 665 aa21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 GRIN2CQ14957 1233 aa21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 LRRC8DQ7L1W4 858 aa21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 SERINC5Q86VE9 423 aa21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 TRIM50Q86XT4 487 aa21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 ANO3Q9BYT9 981 aa21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 TM6SF1Q9BZW5 370 aa21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 RNPEPQ9H4A4 650 aa21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 ZNF576Q9H609 170 aa21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 EHMT1Q9H9B1 1298 aa21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 SLC4A7Q9Y6M7 1214 aa21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 CHD9Q3L8U1 2897 aa21.66■■□□□ 1.06
HMGB3P22-201ENST00000442010 ESYT2A0FGR8 921 aa21.65■■□□□ 1.06
HMGB3P22-201ENST00000442010 ADAMTS3O15072 1205 aa21.65■■□□□ 1.06
HMGB3P22-201ENST00000442010 CXCL10P02778 98 aa21.65■■□□□ 1.06
HMGB3P22-201ENST00000442010 SMIM10L2AP0DMW4 78 aa21.65■■□□□ 1.06
HMGB3P22-201ENST00000442010 SMIM10L2BP0DMW5 78 aa21.65■■□□□ 1.06
HMGB3P22-201ENST00000442010 PDIA3P30101 505 aaKnown RBP21.65■■□□□ 1.06
HMGB3P22-201ENST00000442010 AP3B2Q13367 1082 aa21.65■■□□□ 1.06
HMGB3P22-201ENST00000442010 CYP2W1Q8TAV3 490 aa21.65■■□□□ 1.06
HMGB3P22-201ENST00000442010 MYLIPQ8WY64 445 aa21.65■■□□□ 1.06
HMGB3P22-201ENST00000442010 MXRA8Q9BRK3 442 aa21.65■■□□□ 1.06
HMGB3P22-201ENST00000442010 GLT8D2Q9H1C3 349 aa21.65■■□□□ 1.06
HMGB3P22-201ENST00000442010 TMEM260Q9NX78 707 aa21.65■■□□□ 1.06
HMGB3P22-201ENST00000442010 YBX2Q9Y2T7 364 aaKnown RBP21.65■■□□□ 1.06
HMGB3P22-201ENST00000442010 MICAL3Q7RTP6 2002 aa21.65■■□□□ 1.06
HMGB3P22-201ENST00000442010 WDR81Q562E7 1941 aa21.65■■□□□ 1.06
HMGB3P22-201ENST00000442010 GSTTP1A0A1W2PQM5 241 aa21.64■■□□□ 1.05
HMGB3P22-201ENST00000442010 NBNO60934 754 aa21.64■■□□□ 1.05
HMGB3P22-201ENST00000442010 PARNO95453 639 aaKnown RBP21.64■■□□□ 1.05
HMGB3P22-201ENST00000442010 SREBF1P36956 1147 aa21.64■■□□□ 1.05
HMGB3P22-201ENST00000442010 ADAM17P78536 824 aa21.64■■□□□ 1.05
HMGB3P22-201ENST00000442010 SP4Q02446 784 aa21.64■■□□□ 1.05
HMGB3P22-201ENST00000442010 RAB30Q15771 203 aa21.64■■□□□ 1.05
HMGB3P22-201ENST00000442010 CRYGNQ8WXF5 182 aa21.64■■□□□ 1.05
HMGB3P22-201ENST00000442010 ZMYND12Q9H0C1 365 aa21.64■■□□□ 1.05
HMGB3P22-201ENST00000442010 KCNH7Q9NS40 1196 aa21.64■■□□□ 1.05
HMGB3P22-201ENST00000442010 C17orf102A2RUQ5 167 aa21.63■■□□□ 1.05
HMGB3P22-201ENST00000442010 ZBBXA8MT70 800 aa21.63■■□□□ 1.05
HMGB3P22-201ENST00000442010 ACTN1P12814 892 aa21.63■■□□□ 1.05
HMGB3P22-201ENST00000442010 TCF7P36402 384 aaPredicted RBP21.63■■□□□ 1.05
HMGB3P22-201ENST00000442010 MBTPS1Q14703 1052 aa21.63■■□□□ 1.05
HMGB3P22-201ENST00000442010 ZNF618Q5T7W0 954 aa21.63■■□□□ 1.05
HMGB3P22-201ENST00000442010 UTP14CQ5TAP6 766 aaKnown RBP21.63■■□□□ 1.05
HMGB3P22-201ENST00000442010 PHKBQ93100 1093 aa21.63■■□□□ 1.05
HMGB3P22-201ENST00000442010 RNF26Q9BY78 433 aaPredicted RBP21.63■■□□□ 1.05
HMGB3P22-201ENST00000442010 SIP14410 1827 aa21.62■■□□□ 1.05
HMGB3P22-201ENST00000442010 CHD7Q9P2D1 2997 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms