RNA–Protein interactions for RNA: ENST00000440813.1

TSSC4-206, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-206ENST00000440813 KRT40Q6A162 431 aa23■■□□□ 1.27
TSSC4-206ENST00000440813 KRT25Q7Z3Z0 450 aa23■■□□□ 1.27
TSSC4-206ENST00000440813 UIMC1Q96RL1 719 aa23■■□□□ 1.27
TSSC4-206ENST00000440813 ZMYND8Q9ULU4 1186 aaPredicted RBP23■■□□□ 1.27
TSSC4-206ENST00000440813 TELO2Q9Y4R8 837 aa23■■□□□ 1.27
TSSC4-206ENST00000440813 GRIN2DO15399 1336 aa23■■□□□ 1.27
TSSC4-206ENST00000440813 CCDC194A0A1B0GVG4 234 aa22.99■■□□□ 1.27
TSSC4-206ENST00000440813 SYN1P17600 705 aa22.99■■□□□ 1.27
TSSC4-206ENST00000440813 KRT2P35908 639 aa22.99■■□□□ 1.27
TSSC4-206ENST00000440813 NIPA1Q7RTP0 329 aa22.99■■□□□ 1.27
TSSC4-206ENST00000440813 PPP1R13LQ8WUF5 828 aa22.99■■□□□ 1.27
TSSC4-206ENST00000440813 AGO4Q9HCK5 861 aaKnown RBP22.99■■□□□ 1.27
TSSC4-206ENST00000440813 BRMS1Q9HCU9 246 aa22.99■■□□□ 1.27
TSSC4-206ENST00000440813 IGLV3-22A0A075B6J6 115 aa22.98■■□□□ 1.27
TSSC4-206ENST00000440813 EDIL3O43854 480 aa22.98■■□□□ 1.27
TSSC4-206ENST00000440813 PPFIA4O75335 1185 aa22.98■■□□□ 1.27
TSSC4-206ENST00000440813 MMP1P03956 469 aa22.98■■□□□ 1.27
TSSC4-206ENST00000440813 ZNF286BP0CG31 522 aa22.98■■□□□ 1.27
TSSC4-206ENST00000440813 CDK7P50613 346 aa22.98■■□□□ 1.27
TSSC4-206ENST00000440813 USP11P51784 963 aa22.98■■□□□ 1.27
TSSC4-206ENST00000440813 NR5A1Q13285 461 aa22.98■■□□□ 1.27
TSSC4-206ENST00000440813 INF2Q27J81 1249 aa22.98■■□□□ 1.27
TSSC4-206ENST00000440813 PRR16Q569H4 304 aa22.98■■□□□ 1.27
TSSC4-206ENST00000440813 C8orf76Q96K31 380 aa22.98■■□□□ 1.27
TSSC4-206ENST00000440813 GPR20Q99678 358 aa22.98■■□□□ 1.27
TSSC4-206ENST00000440813 PCDH10Q9P2E7 1040 aa22.98■■□□□ 1.27
TSSC4-206ENST00000440813 CIITAP33076 1130 aa22.97■■□□□ 1.27
TSSC4-206ENST00000440813 NBPF20Q3BBV1 942 aa22.97■■□□□ 1.27
TSSC4-206ENST00000440813 PIK3AP1Q6ZUJ8 805 aa22.97■■□□□ 1.27
TSSC4-206ENST00000440813 SLC43A3Q8NBI5 491 aa22.97■■□□□ 1.27
TSSC4-206ENST00000440813 KAT2BQ92831 832 aa22.97■■□□□ 1.27
TSSC4-206ENST00000440813 SDF4Q9BRK5 362 aa22.97■■□□□ 1.27
TSSC4-206ENST00000440813 PRDM5Q9NQX1 630 aaPredicted RBP22.97■■□□□ 1.27
TSSC4-206ENST00000440813 DCDC2CA8MYV0 355 aa22.96■■□□□ 1.27
TSSC4-206ENST00000440813 BTBD18B2RXH4 712 aa22.96■■□□□ 1.27
TSSC4-206ENST00000440813 HOXD8P13378 290 aaPredicted RBP22.96■■□□□ 1.27
TSSC4-206ENST00000440813 ITGB3BPQ13352 177 aaPredicted RBP22.96■■□□□ 1.27
TSSC4-206ENST00000440813 FAM47CQ5HY64 1035 aa22.96■■□□□ 1.27
TSSC4-206ENST00000440813 ANKRD33Q7Z3H0 272 aa22.96■■□□□ 1.27
TSSC4-206ENST00000440813 DIS3L2Q8IYB7 885 aaKnown RBP22.96■■□□□ 1.27
TSSC4-206ENST00000440813 MROH7Q68CQ1 1323 aa22.96■■□□□ 1.27
TSSC4-206ENST00000440813 CEP290O15078 2479 aa22.96■■□□□ 1.27
TSSC4-206ENST00000440813 SETQ01105 290 aaPredicted RBP22.95■■□□□ 1.26
TSSC4-206ENST00000440813 EARS2Q5JPH6 523 aaKnown RBP22.95■■□□□ 1.26
TSSC4-206ENST00000440813 UTP14CQ5TAP6 766 aaKnown RBP22.95■■□□□ 1.26
TSSC4-206ENST00000440813 PRPF38BQ5VTL8 546 aaKnown RBP22.95■■□□□ 1.26
TSSC4-206ENST00000440813 SH3RF1Q7Z6J0 888 aa22.95■■□□□ 1.26
TSSC4-206ENST00000440813 TOX2Q96NM4 488 aa22.95■■□□□ 1.26
TSSC4-206ENST00000440813 ZNF577Q9BSK1 485 aa22.95■■□□□ 1.26
TSSC4-206ENST00000440813 JPH1Q9HDC5 661 aaPredicted RBP22.95■■□□□ 1.26
TSSC4-206ENST00000440813 SLC9A2Q9UBY0 812 aa22.95■■□□□ 1.26
TSSC4-206ENST00000440813 PRKAG2Q9UGJ0 569 aa22.95■■□□□ 1.26
TSSC4-206ENST00000440813 SCN10AQ9Y5Y9 1956 aa22.95■■□□□ 1.26
TSSC4-206ENST00000440813 NFASCO94856 1347 aa22.94■■□□□ 1.26
TSSC4-206ENST00000440813 FAM205CA6NFA0 338 aa22.94■■□□□ 1.26
TSSC4-206ENST00000440813 DDX39AO00148 427 aaKnown RBP22.94■■□□□ 1.26
TSSC4-206ENST00000440813 IPO5O00410 1097 aaKnown RBP22.94■■□□□ 1.26
TSSC4-206ENST00000440813 TDP2O95551 362 aa22.94■■□□□ 1.26
TSSC4-206ENST00000440813 LGALS2P05162 132 aa22.94■■□□□ 1.26
TSSC4-206ENST00000440813 CLTBP09497 229 aa22.94■■□□□ 1.26
TSSC4-206ENST00000440813 PSEN2P49810 448 aa22.94■■□□□ 1.26
TSSC4-206ENST00000440813 FAAP100Q0VG06 881 aa22.94■■□□□ 1.26
TSSC4-206ENST00000440813 SAFBQ15424 915 aaKnown RBP eCLIP22.94■■□□□ 1.26
TSSC4-206ENST00000440813 LETM2Q2VYF4 491 aa22.94■■□□□ 1.26
TSSC4-206ENST00000440813 FAM126BQ8IXS8 530 aa22.94■■□□□ 1.26
TSSC4-206ENST00000440813 TNFRSF25Q93038 417 aa22.94■■□□□ 1.26
TSSC4-206ENST00000440813 LENG9Q96B70 501 aa22.94■■□□□ 1.26
TSSC4-206ENST00000440813 C16orf70Q9BSU1 422 aa22.94■■□□□ 1.26
TSSC4-206ENST00000440813 SEZ6LQ9BYH1 1024 aa22.94■■□□□ 1.26
TSSC4-206ENST00000440813 PDLIM7Q9NR12 457 aa22.94■■□□□ 1.26
TSSC4-206ENST00000440813 GSTTP1A0A1W2PQM5 241 aa22.93■■□□□ 1.26
TSSC4-206ENST00000440813 TLR3O15455 904 aaKnown RBP22.93■■□□□ 1.26
TSSC4-206ENST00000440813 F2P00734 622 aa22.93■■□□□ 1.26
TSSC4-206ENST00000440813 TCF7P36402 384 aaPredicted RBP22.93■■□□□ 1.26
TSSC4-206ENST00000440813 MFSD10Q14728 455 aa22.93■■□□□ 1.26
TSSC4-206ENST00000440813 KIAA0753Q2KHM9 967 aa22.93■■□□□ 1.26
TSSC4-206ENST00000440813 NEK8Q86SG6 692 aa22.93■■□□□ 1.26
TSSC4-206ENST00000440813 FBXO18Q8NFZ0 1043 aa22.93■■□□□ 1.26
TSSC4-206ENST00000440813 SEPT1Q8WYJ6 367 aa22.93■■□□□ 1.26
TSSC4-206ENST00000440813 KATNAL1Q9BW62 490 aa22.93■■□□□ 1.26
TSSC4-206ENST00000440813 TRPV6Q9H1D0 765 aa22.93■■□□□ 1.26
TSSC4-206ENST00000440813 TMEM39AQ9NV64 488 aa22.93■■□□□ 1.26
TSSC4-206ENST00000440813 TRIM43BA6NCK2 446 aa22.92■■□□□ 1.26
TSSC4-206ENST00000440813 B4GALT4O60513 344 aa22.92■■□□□ 1.26
TSSC4-206ENST00000440813 GJB2P29033 226 aa22.92■■□□□ 1.26
TSSC4-206ENST00000440813 NFRKBQ6P4R8 1299 aa22.92■■□□□ 1.26
TSSC4-206ENST00000440813 TRIM50Q86XT4 487 aa22.92■■□□□ 1.26
TSSC4-206ENST00000440813 TRIM43Q96BQ3 446 aaPredicted RBP22.92■■□□□ 1.26
TSSC4-206ENST00000440813 SMC3Q9UQE7 1217 aa22.92■■□□□ 1.26
TSSC4-206ENST00000440813 KIF3AQ9Y496 699 aa22.92■■□□□ 1.26
TSSC4-206ENST00000440813 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.92■■□□□ 1.26
TSSC4-206ENST00000440813 CYP3A7-CYP3A51PA0A087WV96 503 aa22.91■■□□□ 1.26
TSSC4-206ENST00000440813 H3BRB1 525 aa22.91■■□□□ 1.26
TSSC4-206ENST00000440813 HAS3O00219 553 aa22.91■■□□□ 1.26
TSSC4-206ENST00000440813 MSH4O15457 936 aa22.91■■□□□ 1.26
TSSC4-206ENST00000440813 DHX15O43143 795 aaKnown RBP22.91■■□□□ 1.26
TSSC4-206ENST00000440813 CD4P01730 458 aa22.91■■□□□ 1.26
TSSC4-206ENST00000440813 CYP3A7P24462 503 aa22.91■■□□□ 1.26
TSSC4-206ENST00000440813 ACTR2P61160 394 aa22.91■■□□□ 1.26
TSSC4-206ENST00000440813 Q4G0T1 1027 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms