RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 SPDL1Q96EA4 605 aa13.65□□□□□ -0.22
PCGF3-207ENST00000440452 LRRC53A6NM62 1247 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 HEXIM1O94992 359 aaKnown RBP13.64□□□□□ -0.23
PCGF3-207ENST00000440452 CPP00450 1065 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 DDX12PQ92771 950 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 RPGRIP1Q96KN7 1286 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 ZIM3Q96PE6 472 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 NDST4Q9H3R1 872 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 NUP98P52948 1817 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 KLRC4O43908 158 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 RPS6KA4O75676 772 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 MYBL1P10243 752 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 AKR1B1P15121 316 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 POLR2FP61218 127 aaKnown RBP13.64□□□□□ -0.23
PCGF3-207ENST00000440452 CYP4A11Q02928 519 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 DCAF17Q5H9S7 520 aaPredicted RBP13.64□□□□□ -0.23
PCGF3-207ENST00000440452 NLRP14Q86W24 1093 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 TSG101Q99816 390 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 RAB34Q9BZG1 259 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.64□□□□□ -0.231e-6■■■■■ 183.1
PCGF3-207ENST00000440452 CAPN11Q9UMQ6 739 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 CAPN6Q9Y6Q1 641 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 ZSCAN5CA6NGD5 496 aaPredicted RBP13.64□□□□□ -0.23
PCGF3-207ENST00000440452 E9PMD0 336 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 FTCDO95954 541 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 EPHB4P54760 987 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 TSEN2Q8NCE0 465 aaKnown RBP13.64□□□□□ -0.23
PCGF3-207ENST00000440452 THAP9Q9H5L6 903 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 CPSF2Q9P2I0 782 aaKnown RBP13.64□□□□□ -0.23
PCGF3-207ENST00000440452 KIAA1024Q9UPX6 916 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 TOGARAM1Q9Y4F4 1720 aa13.64□□□□□ -0.23
PCGF3-207ENST00000440452 TMCO5BA8MYB1 307 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 RHOBTB3O94955 611 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 STAT3P40763 770 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 KIF11P52732 1056 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 SBK1Q52WX2 424 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 ITIH6Q6UXX5 1313 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 SLC30A10Q6XR72 485 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 TRAPPC11Q7Z392 1133 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 PARP9Q8IXQ6 854 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 KIAA0895Q8NCT3 520 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 OR2W6PQ8NHA6 318 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 TAF4BQ92750 862 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 MS4A14Q96JA4 679 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 KRT12Q99456 494 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 SEMA6BQ9H3T3 888 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 SEPT11Q9NVA2 429 aaKnown RBP13.63□□□□□ -0.23
PCGF3-207ENST00000440452 ZBED6P86452 979 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 GRAPQ13588 217 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 IFT20Q8IY31 132 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 CACNA2D3Q8IZS8 1091 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 GRAPLQ8TC17 118 aaPredicted RBP13.63□□□□□ -0.23
PCGF3-207ENST00000440452 MIEF2Q96C03 454 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 DHTKD1Q96HY7 919 aaPredicted RBP13.63□□□□□ -0.23
PCGF3-207ENST00000440452 GOLPH3Q9H4A6 298 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 KBTBD4Q9NVX7 518 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 AGPSO00116 658 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 TMOD1P28289 359 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 AARSP49588 968 aaKnown RBP eCLIP13.63□□□□□ -0.23
PCGF3-207ENST00000440452 TMED8Q6PL24 325 aaPredicted RBP13.63□□□□□ -0.23
PCGF3-207ENST00000440452 KCNK18Q7Z418 384 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 STIM2Q9P246 746 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 PCDHA12Q9UN75 941 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 STK38LQ9Y2H1 464 aa13.63□□□□□ -0.23
PCGF3-207ENST00000440452 COL4A1P02462 1669 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 FLT1P17948 1338 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 PPP1R37O75864 691 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 SRGNP10124 158 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 PLS1Q14651 629 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 AP1ARQ63HQ0 302 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 TRIM68Q6AZZ1 485 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 YIPF3Q9GZM5 350 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 DDX25Q9UHL0 483 aaKnown RBP13.62□□□□□ -0.23
PCGF3-207ENST00000440452 MYH13Q9UKX3 1938 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 LRRC10BA6NIK2 292 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 GCOM1H8Y6P7 765 aaPredicted RBP13.62□□□□□ -0.23
PCGF3-207ENST00000440452 CHMP2AO43633 222 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 MYZAPP0CAP1 466 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 GSCP56915 257 aaPredicted RBP13.62□□□□□ -0.23
PCGF3-207ENST00000440452 SPATA4Q8NEY3 305 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 USP40Q9NVE5 1235 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 PCDHA13Q9Y5I0 950 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 MYH8P13535 1937 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 PALM3A6NDB9 673 aaPredicted RBP13.62□□□□□ -0.23
PCGF3-207ENST00000440452 USP17L10C9JJH3 530 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 CLSTN1O94985 981 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 PAK2Q13177 524 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 FAM133BQ5BKY9 247 aaKnown RBP13.62□□□□□ -0.23
PCGF3-207ENST00000440452 TBC1D1Q86TI0 1168 aaPredicted RBP13.62□□□□□ -0.23
PCGF3-207ENST00000440452 KIAA0825Q8IV33 1275 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 KSR1Q8IVT5 923 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 ARFGAP2Q8N6H7 521 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 DYDC1Q8WWB3 177 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 FAM167BQ9BTA0 163 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 LSM14BQ9BX40 385 aaKnown RBP13.62□□□□□ -0.23
PCGF3-207ENST00000440452 CCSER1Q9C0I3 900 aa13.62□□□□□ -0.23
PCGF3-207ENST00000440452 PDS5AQ29RF7 1337 aaKnown RBP13.61□□□□□ -0.23
PCGF3-207ENST00000440452 KDM4FA0A1W2PPD8 638 aa13.61□□□□□ -0.23
PCGF3-207ENST00000440452 GCFC2P16383 781 aaKnown RBP13.61□□□□□ -0.23
PCGF3-207ENST00000440452 ZNF76P36508 570 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms