RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 PTPRAP18433 802 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 HIRAP54198 1017 aaPredicted RBP14.68□□□□□ -0.06
ACTN4-204ENST00000440400 KRT31Q15323 416 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 SH3D19Q5HYK7 790 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 GPATCH11Q8N954 259 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 TC2NQ8N9U0 490 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 ZNF507Q8TCN5 953 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 P2RX5Q93086 422 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 KIFC2Q96AC6 838 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 MEIS1O00470 390 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 MED24O75448 989 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 VCAM1P19320 739 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 NOP2P46087 812 aaKnown RBP14.68□□□□□ -0.06
ACTN4-204ENST00000440400 STK4Q13043 487 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 IKQ13123 557 aaPredicted RBP14.68□□□□□ -0.06
ACTN4-204ENST00000440400 STIM1Q13586 685 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 KLRG1Q96E93 195 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 PANX2Q96RD6 677 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 AS3MTQ9HBK9 375 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 FBXO28Q9NVF7 368 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.68□□□□□ -0.06
ACTN4-204ENST00000440400 KCNG1Q9UIX4 513 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 PAXBP1Q9Y5B6 917 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 MYPNQ86TC9 1320 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 PSMA7O14818 248 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 RAD21O60216 631 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 BACE1P56817 501 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 PLIN2Q99541 437 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 EFCC1Q9HA90 598 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 TUFT1Q9NNX1 390 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 TRMT1Q9NXH9 659 aaKnown RBP14.67□□□□□ -0.06
ACTN4-204ENST00000440400 SCN4AP35499 1836 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 A0A1W2PQC6 194 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 PDE4DQ08499 809 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 ZCWPW2Q504Y3 356 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 FILIP1Q7Z7B0 1213 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 KCNJ18B7U540 433 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 C19orf81C9J6K1 198 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 SFPQP23246 707 aaKnown RBP eCLIP14.67□□□□□ -0.06
ACTN4-204ENST00000440400 HOXA13P31271 388 aaPredicted RBP14.67□□□□□ -0.06
ACTN4-204ENST00000440400 COPB1P53618 953 aaKnown RBP14.67□□□□□ -0.06
ACTN4-204ENST00000440400 ASIC1P78348 528 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 KCNJ12Q14500 433 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 ANGEL2Q5VTE6 544 aaKnown RBP14.67□□□□□ -0.06
ACTN4-204ENST00000440400 OTOP1Q7RTM1 612 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 MCF2L2Q86YR7 1114 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 CCAR2Q8N163 923 aaKnown RBP14.67□□□□□ -0.06
ACTN4-204ENST00000440400 SYT2Q8N9I0 419 aaPredicted RBP14.67□□□□□ -0.06
ACTN4-204ENST00000440400 RASSF8Q8NHQ8 419 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 DDX12PQ92771 950 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 CDK5RAP3Q96JB5 506 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 HSD17B14Q9BPX1 270 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 SPON1Q9HCB6 807 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 GJA3Q9Y6H8 435 aa14.67□□□□□ -0.06
ACTN4-204ENST00000440400 CCT6AP40227 531 aaKnown RBP14.66□□□□□ -0.06
ACTN4-204ENST00000440400 PSEN1P49768 467 aa14.66□□□□□ -0.06
ACTN4-204ENST00000440400 STX17P56962 302 aa14.66□□□□□ -0.06
ACTN4-204ENST00000440400 PRR16Q569H4 304 aa14.66□□□□□ -0.06
ACTN4-204ENST00000440400 CCDC174Q6PII3 467 aa14.66□□□□□ -0.06
ACTN4-204ENST00000440400 CATSPER3Q86XQ3 398 aa14.66□□□□□ -0.06
ACTN4-204ENST00000440400 TBC1D5Q92609 795 aa14.66□□□□□ -0.06
ACTN4-204ENST00000440400 SEMA6BQ9H3T3 888 aa14.66□□□□□ -0.06
ACTN4-204ENST00000440400 CYP11B2P19099 503 aa14.66□□□□□ -0.06
ACTN4-204ENST00000440400 ARSHQ5FYA8 562 aa14.66□□□□□ -0.06
ACTN4-204ENST00000440400 E4F1Q66K89 784 aaPredicted RBP14.66□□□□□ -0.06
ACTN4-204ENST00000440400 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.66□□□□□ -0.061e-8■□□□□ 11.3
ACTN4-204ENST00000440400 ERMNQ8TAM6 284 aa14.66□□□□□ -0.06
ACTN4-204ENST00000440400 UBIAD1Q9Y5Z9 338 aa14.66□□□□□ -0.06
ACTN4-204ENST00000440400 TEX33O43247 280 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 PLA2G4BP0C869 781 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 FCER1AP12319 257 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 LRRC63Q05C16 580 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 TRIM14Q14142 442 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 PCNX4Q63HM2 1172 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 KLHL10Q6JEL2 608 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 CCDC84Q86UT8 332 aaPredicted RBP14.65□□□□□ -0.06
ACTN4-204ENST00000440400 ZNF280CQ8ND82 737 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 GJA10Q969M2 543 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 CCDC51Q96ER9 411 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 ZCCHC17Q9NP64 241 aaKnown RBP14.65□□□□□ -0.06
ACTN4-204ENST00000440400 GEMIN8Q9NWZ8 242 aaKnown RBP14.65□□□□□ -0.06
ACTN4-204ENST00000440400 FAM53CQ9NYF3 392 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 COL20A1Q9P218 1284 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 LGALS16A8MUM7 142 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 MYO1CO00159 1063 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 CEP55Q53EZ4 464 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 RIT2Q99578 217 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 AFG3L2Q9Y4W6 797 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 STX10O60499 249 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 COASYQ13057 564 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 MTMR2Q13614 643 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 ERCC6LQ2NKX8 1250 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 ANKRD40Q6AI12 368 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 EPM2AIP1Q7L775 607 aaPredicted RBP14.65□□□□□ -0.06
ACTN4-204ENST00000440400 AGBL1Q96MI9 1066 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 MXRA8Q9BRK3 442 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 CCPG1Q9ULG6 757 aa14.65□□□□□ -0.06
ACTN4-204ENST00000440400 ARID2Q68CP9 1835 aa14.64□□□□□ -0.07
ACTN4-204ENST00000440400 WDR81Q562E7 1941 aa14.64□□□□□ -0.07
ACTN4-204ENST00000440400 POTEB3A0JP26 581 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms