RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 SNAI1O95863 264 aaPredicted RBP8.61□□□□□ -1.03
COPS3-203ENST00000439936 CFBP00751 764 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 CALML3P27482 149 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 ANKRD1Q15327 319 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 MCF2L2Q86YR7 1114 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 TRPV1Q8NER1 839 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 TAAR1Q96RJ0 339 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 MAF1Q9H063 256 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 UPF2Q9HAU5 1272 aaKnown RBP8.61□□□□□ -1.03
COPS3-203ENST00000439936 CNTNAP5Q8WYK1 1306 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 PPFIA3O75145 1194 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 GJB1P08034 283 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 IFNAR1P17181 557 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 EN2P19622 333 aaPredicted RBP8.61□□□□□ -1.03
COPS3-203ENST00000439936 CNGA1P29973 690 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 CCND3P30281 292 aaPredicted RBP8.61□□□□□ -1.03
COPS3-203ENST00000439936 CTHP32929 405 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 HSD17B4P51659 736 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 PKN1Q16512 942 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 SLC30A10Q6XR72 485 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 NOL8Q76FK4 1167 aaKnown RBP8.61□□□□□ -1.03
COPS3-203ENST00000439936 MSL3Q8N5Y2 521 aaKnown RBP8.61□□□□□ -1.03
COPS3-203ENST00000439936 SAMD3Q8N6K7 520 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 SYTL5Q8TDW5 730 aaPredicted RBP8.61□□□□□ -1.03
COPS3-203ENST00000439936 PHKBQ93100 1093 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 TBC1D32Q96NH3 1257 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 SLKQ9H2G2 1235 aaPredicted RBP8.61□□□□□ -1.03
COPS3-203ENST00000439936 MAP3K20Q9NYL2 800 aaKnown RBP8.61□□□□□ -1.03
COPS3-203ENST00000439936 COL20A1Q9P218 1284 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 SEC63Q9UGP8 760 aaKnown RBP8.61□□□□□ -1.03
COPS3-203ENST00000439936 DDX49Q9Y6V7 483 aaKnown RBP8.61□□□□□ -1.03
COPS3-203ENST00000439936 ASTN1O14525 1302 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 NID2Q14112 1375 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 ASB14A6NK59 587 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 PFKFB2O60825 505 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 DTNBO60941 627 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 LARGE1O95461 756 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 SGPL1O95470 568 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 ZNF865P0CJ78 1059 aaPredicted RBP8.6□□□□□ -1.03
COPS3-203ENST00000439936 CYBAP13498 195 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 HOXA13P31271 388 aaPredicted RBP8.6□□□□□ -1.03
COPS3-203ENST00000439936 ALDH5A1P51649 535 aaPredicted RBP8.6□□□□□ -1.03
COPS3-203ENST00000439936 SOX10P56693 466 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 GHRHRQ02643 423 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 SCRN1Q12765 414 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 ME3Q16798 604 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 ARMCX2Q7L311 632 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 NECAB1Q8N987 351 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 ZNF511Q8NB15 262 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 DNERQ8NFT8 737 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 MORC4Q8TE76 937 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 GPKOWQ92917 476 aaPredicted RBP eCLIP8.6□□□□□ -1.03
COPS3-203ENST00000439936 DEFB118Q96PH6 123 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 SLC26A6Q9BXS9 759 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.6□□□□□ -1.03
COPS3-203ENST00000439936 GDPD2Q9HCC8 539 aa8.6□□□□□ -1.03
COPS3-203ENST00000439936 PAK6Q9NQU5 681 aaPredicted RBP8.6□□□□□ -1.03
COPS3-203ENST00000439936 ADD3Q9UEY8 706 aaKnown RBP8.6□□□□□ -1.03
COPS3-203ENST00000439936 SYNGAP1Q96PV0 1343 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 GCOM1H8Y6P7 765 aaPredicted RBP8.59□□□□□ -1.03
COPS3-203ENST00000439936 MEIS2O14770 477 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 CPLX1O14810 134 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 TFRCP02786 760 aaKnown RBP8.59□□□□□ -1.03
COPS3-203ENST00000439936 POLR2MP0CAP2 368 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 SCG2P13521 617 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 GJA8P48165 433 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 AKAP17AQ02040 695 aaKnown RBP8.59□□□□□ -1.03
COPS3-203ENST00000439936 SSRP1Q08945 709 aaKnown RBP8.59□□□□□ -1.03
COPS3-203ENST00000439936 ACVR2BQ13705 512 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 RABEP1Q15276 862 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 PFKFB3Q16875 520 aaPredicted RBP8.59□□□□□ -1.03
COPS3-203ENST00000439936 WWC2Q6AWC2 1192 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 USP17L6PQ6QN14 398 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 HEATR3Q7Z4Q2 680 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 FCHSD1Q86WN1 690 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 NSUN6Q8TEA1 469 aaKnown RBP8.59□□□□□ -1.03
COPS3-203ENST00000439936 U2AF1L4Q8WU68 220 aaKnown RBP8.59□□□□□ -1.03
COPS3-203ENST00000439936 RMDN3Q96TC7 470 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 RNF26Q9BY78 433 aaPredicted RBP8.59□□□□□ -1.03
COPS3-203ENST00000439936 KATNBL1Q9H079 304 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 ABHD16BQ9H3Z7 469 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 PSTPIP2Q9H939 334 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 NRBP1Q9UHY1 535 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 LIMCH1Q9UPQ0 1083 aa8.59□□□□□ -1.03
COPS3-203ENST00000439936 MYH7BA7E2Y1 1941 aa8.58□□□□□ -1.04
COPS3-203ENST00000439936 LOC102724159A0A0B4J2E5 919 aa8.58□□□□□ -1.04
COPS3-203ENST00000439936 SMCO2A6NFE2 343 aa8.58□□□□□ -1.04
COPS3-203ENST00000439936 STXBP3O00186 592 aa8.58□□□□□ -1.04
COPS3-203ENST00000439936 SEPT4O43236 478 aa8.58□□□□□ -1.04
COPS3-203ENST00000439936 CTDNEP1O95476 244 aa8.58□□□□□ -1.04
COPS3-203ENST00000439936 NR3C2P08235 984 aa8.58□□□□□ -1.04
COPS3-203ENST00000439936 EDNRBP24530 442 aa8.58□□□□□ -1.04
COPS3-203ENST00000439936 PWP2Q15269 919 aaKnown RBP8.58□□□□□ -1.04
COPS3-203ENST00000439936 CCDC144BQ3MJ40 725 aa8.58□□□□□ -1.04
COPS3-203ENST00000439936 ARHGEF16Q5VV41 709 aa8.58□□□□□ -1.04
COPS3-203ENST00000439936 ANO1Q5XXA6 986 aa8.58□□□□□ -1.04
COPS3-203ENST00000439936 TAPT1Q6NXT6 567 aa8.58□□□□□ -1.04
COPS3-203ENST00000439936 CPLX2Q6PUV4 134 aaKnown RBP8.58□□□□□ -1.04
COPS3-203ENST00000439936 EEPD1Q7L9B9 569 aa8.58□□□□□ -1.04
COPS3-203ENST00000439936 ZSCAN31Q96LW9 406 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms