RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 Q9Y3F1 56 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 GAS7O60861 476 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 DUSP11O75319 330 aaKnown RBP11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 ARIH2O95376 493 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 GGPS1O95749 300 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 SMPD1P17405 629 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 PRPHP41219 470 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 ATP2C1P98194 919 aaPredicted RBP11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 DNM1Q05193 864 aaKnown RBP11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 PTGDRQ13258 359 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 LAMC2Q13753 1193 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 STK38Q15208 465 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 LY6KQ17RY6 165 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 TMEM266Q2M3C6 531 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 FOXD4L6Q3SYB3 417 aaPredicted RBP11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 ARL6IP4Q66PJ3 421 aaKnown RBP11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 METTL7BQ6UX53 244 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 FOXD4L3Q6VB84 417 aaPredicted RBP11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 TLK2Q86UE8 772 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 DHX37Q8IY37 1157 aaKnown RBP11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 OR6J1Q8NGC5 347 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 EMID1Q96A84 441 aaPredicted RBP11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 ZNF333Q96JL9 665 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 USP28Q96RU2 1077 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 RAB34Q9BZG1 259 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 AP5M1Q9H0R1 490 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 MLXIPQ9HAP2 919 aa11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 JPH1Q9HDC5 661 aaPredicted RBP11.93□□□□□ -0.5
HLA-DMB-259ENST00000438510 NOP56O00567 594 aaKnown RBP11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 ATP9AO75110 1047 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 YEATS4O95619 227 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 CCL5P13501 91 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 NCLP19338 710 aaKnown RBP11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 NASPP49321 788 aaPredicted RBP11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 CPT1AP50416 773 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 KRT76Q01546 638 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 SP2Q02086 613 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 CEBPZQ03701 1054 aaKnown RBP11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 ARHGAP1Q07960 439 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 ITGB3BPQ13352 177 aaPredicted RBP11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 BRDTQ58F21 947 aaPredicted RBP11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 CELF3Q5SZQ8 465 aaKnown RBP11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 CYFIP1Q7L576 1253 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 HAS1Q92839 578 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 MTMR9Q96QG7 549 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 RNF208Q9H0X6 261 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 UNC93B1Q9H1C4 597 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 TMEM60Q9H2L4 133 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 PAK6Q9NQU5 681 aaPredicted RBP11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 SLC9A2Q9UBY0 812 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 PCDHA12Q9UN75 941 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 GNEQ9Y223 722 aaKnown RBP11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 CLIC4Q9Y696 253 aa11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 MORC2Q9Y6X9 1032 aaPredicted RBP11.92□□□□□ -0.5
HLA-DMB-259ENST00000438510 ELP1O95163 1332 aa11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 SYNRGQ9UMZ2 1314 aa11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 DDX39AO00148 427 aaKnown RBP11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 ADCY6O43306 1168 aa11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 PSMD10O75832 226 aa11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 FARP2O94887 1054 aaPredicted RBP11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 SFNP31947 248 aa11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 TXKP42681 527 aa11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 PPP2R5CQ13362 524 aa11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 SLC39A14Q15043 492 aa11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 ZNF746Q6NUN9 644 aaPredicted RBP11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 DTHD1Q6ZMT9 781 aa11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 SMAP1Q8IYB5 467 aaPredicted RBP11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 C4orf32Q8N8J7 132 aa11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 KCNG4Q8TDN1 519 aa11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 FERMT2Q96AC1 680 aa11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 ABHD8Q96I13 439 aa11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 SPATA33Q96N06 139 aa11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 FTOQ9C0B1 505 aaKnown RBP eCLIP11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 SCAND2PQ9GZW5 306 aaPredicted RBP11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 TTC12Q9H892 705 aaPredicted RBP11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 XPNPEP3Q9NQH7 507 aa11.91□□□□□ -0.5
HLA-DMB-259ENST00000438510 ARID2Q68CP9 1835 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 WDR64B1ANS9 1081 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 DHX15O43143 795 aaKnown RBP11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 PPP6R2O75170 966 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 MYCP01106 439 aaPredicted RBP11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 CAPN2P17655 700 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 CENPFP49454 3210 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 FXR2P51116 673 aaKnown RBP eCLIP11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 JAK3P52333 1124 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 GJA9P57773 515 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 PTPAQ15257 358 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 MTFR1Q15390 333 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 CSPP1Q1MSJ5 1256 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 TMEM63BQ5T3F8 832 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 GJC2Q5T442 439 aaPredicted RBP11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 RNF180Q86T96 592 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 LINC00301Q8NCQ3 95 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 RDM1Q8NG50 284 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 PPTC7Q8NI37 304 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 COPS5Q92905 334 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 TNPO1Q92973 898 aaKnown RBP11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 LENG1Q96BZ8 264 aaPredicted RBP11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 SPATA32Q96LK8 384 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms