RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 KCNF1Q9H3M0 494 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 JADE2Q9NQC1 790 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 KCND2Q9NZV8 630 aa17.13■□□□□ 0.33
SGCE-205ENST00000437425 ZNF214Q9UL59 606 aaPredicted RBP17.13■□□□□ 0.33
SGCE-205ENST00000437425 ADM5C9JUS6 153 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 EYA4O95677 639 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 SPATA31C1P0DKV0 1188 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 STAT3P40763 770 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 SLC12A3P55017 1021 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 LRRC63Q05C16 580 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 DGKZQ13574 1117 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 MUM1L1Q5H9M0 696 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 CHST13Q8NET6 341 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 GJA10Q969M2 543 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 DNAJC19Q96DA6 116 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 CDCA5Q96FF9 252 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 TRIM47Q96LD4 638 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 ZNF830Q96NB3 372 aaPredicted RBP17.12■□□□□ 0.33
SGCE-205ENST00000437425 NAP1L5Q96NT1 182 aaPredicted RBP17.12■□□□□ 0.33
SGCE-205ENST00000437425 RMDN3Q96TC7 470 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 HSD17B14Q9BPX1 270 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 ACAD9Q9H845 621 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 PANK4Q9NVE7 773 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 ADD3Q9UEY8 706 aaKnown RBP17.12■□□□□ 0.33
SGCE-205ENST00000437425 FBXO40Q9UH90 709 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 PAPPA2Q9BXP8 1791 aa17.12■□□□□ 0.33
SGCE-205ENST00000437425 POLR2AP24928 1970 aaKnown RBP17.12■□□□□ 0.33
SGCE-205ENST00000437425 SPDYE5A6NIY4 337 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 KRT18P05783 430 aaKnown RBP17.11■□□□□ 0.33
SGCE-205ENST00000437425 IDEP14735 1019 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 KCNJ6P48051 423 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 STK4Q13043 487 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 PABPC4Q13310 644 aaKnown RBP eCLIP17.11■□□□□ 0.33
SGCE-205ENST00000437425 TCP11X2Q5H9J9 407 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 ARHGEF16Q5VV41 709 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 CENPPQ6IPU0 288 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 TTI2Q6NXR4 508 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 B3GNT9Q6UX72 402 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 DYMQ7RTS9 669 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 GPBP1Q86WP2 473 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 CACTINQ8WUQ7 758 aaKnown RBP17.11■□□□□ 0.33
SGCE-205ENST00000437425 PXMP2Q9NR77 195 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 HOMER2Q9NSB8 354 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 SPTLC3Q9NUV7 552 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 COL20A1Q9P218 1284 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 TCEAL9Q9UHQ7 104 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 SMCHD1A6NHR9 2005 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 A0A0G2JLL6 359 aaPredicted RBP17.11■□□□□ 0.33
SGCE-205ENST00000437425 FRMD3A2A2Y4 597 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 SPDYE16A6NNV3 312 aaPredicted RBP17.11■□□□□ 0.33
SGCE-205ENST00000437425 KCNJ18B7U540 433 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 E9PMD0 336 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 SSBP05455 408 aaKnown RBP eCLIP17.11■□□□□ 0.33
SGCE-205ENST00000437425 CYP11B2P19099 503 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 CCND2P30279 289 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 COPB2P35606 906 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 C1QTNF8P60827 252 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 PPIL2Q13356 520 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 MTMR1Q13613 665 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 PRKG1Q13976 671 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 KCNJ12Q14500 433 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 TMEM132BQ14DG7 1078 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 PGM5Q15124 567 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 LBX2Q6XYB7 198 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.11■□□□□ 0.33
SGCE-205ENST00000437425 PRRT2Q7Z6L0 340 aaPredicted RBP17.11■□□□□ 0.33
SGCE-205ENST00000437425 NLRX1Q86UT6 975 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 NSUN6Q8TEA1 469 aaKnown RBP17.11■□□□□ 0.33
SGCE-205ENST00000437425 CDHR1Q96JP9 859 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 NACC1Q96RE7 527 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 TSG101Q99816 390 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 PDCD2LQ9BRP1 358 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 TAF1DQ9H5J8 278 aaPredicted RBP17.11■□□□□ 0.33
SGCE-205ENST00000437425 RTN4Q9NQC3 1192 aaKnown RBP17.11■□□□□ 0.33
SGCE-205ENST00000437425 KCNH7Q9NS40 1196 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 RLFQ13129 1914 aa17.11■□□□□ 0.33
SGCE-205ENST00000437425 ITIH6Q6UXX5 1313 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 POTEFA5A3E0 1075 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 TPM1P09493 284 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 POTEIP0CG38 1075 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 ITGB5P18084 799 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 COASYQ13057 564 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 TRIM14Q14142 442 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 NOLC1Q14978 699 aaKnown RBP eCLIP17.1■□□□□ 0.33
SGCE-205ENST00000437425 FAM26FQ5R3K3 315 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 POTEGQ6S5H5 508 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 POTEEQ6S8J3 1075 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 NSMFQ6X4W1 530 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 APTXQ7Z2E3 356 aaKnown RBP17.1■□□□□ 0.33
SGCE-205ENST00000437425 MYOCDQ8IZQ8 938 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 CSGALNACT2Q8N6G5 542 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 KIAA0895Q8NCT3 520 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 RDM1Q8NG50 284 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 GPRASP2Q96D09 838 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 FZD1Q9UP38 647 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 KCNH4Q9UQ05 1017 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 MAPK8IP1Q9UQF2 711 aa17.1■□□□□ 0.33
SGCE-205ENST00000437425 WDR90Q96KV7 1748 aa17.09■□□□□ 0.33
SGCE-205ENST00000437425 ARP10275 920 aa17.09■□□□□ 0.33
SGCE-205ENST00000437425 GAP43P17677 238 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms